Basic Information

Insect: Apolygus lucorum
Gene Symbol: L
Assembly: GCA_009739505.2
Location: CM019167.2:81728663-81819020[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 7.4e-06 0.00062 20.2 1.0 1 23 88 110 88 110 0.98

2 18 0.15 12 6.7 6.5 1 23 116 138 116 138 0.97

3 18 1.8e-06 0.00015 22.1 2.0 1 23 144 166 144 166 0.99

4 18 3e-05 0.0025 18.3 0.2 1 23 172 194 172 194 0.98

5 18 7e-06 0.00058 20.3 0.3 1 23 209 232 209 232 0.98

6 18 0.0087 0.72 10.6 0.0 1 23 299 322 299 322 0.93

7 18 0.037 3.1 8.6 1.3 1 20 334 353 334 357 0.89

8 18 0.26 21 5.9 0.3 3 23 421 441 420 441 0.98

9 18 0.0013 0.11 13.2 0.2 3 23 463 483 462 483 0.97

10 18 0.71 59 4.5 0.3 3 23 493 514 491 514 0.92

11 18 0.19 16 6.3 0.2 1 23 519 542 519 542 0.92

12 18 0.0057 0.47 11.1 2.9 1 23 618 641 618 641 0.97

13 18 1.9 1.6e+02 3.2 0.3 3 23 724 746 723 747 0.86

14 18 0.0019 0.16 12.6 2.6 2 21 759 778 758 779 0.93

15 18 0.0035 0.29 11.8 0.9 2 23 916 938 915 938 0.95

16 18 0.1 8.3 7.2 2.7 1 19 942 960 942 962 0.96

17 18 0.004 0.33 11.6 0.0 1 23 1001 1023 1001 1023 0.97

18 18 0.026 2.1 9.1 1.7 1 23 1030 1052 1030 1052 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	7.4e-06	0.00062	20.2	1.0	1	23	88	110	88	110	0.98
2	18	0.15	12	6.7	6.5	1	23	116	138	116	138	0.97
3	18	1.8e-06	0.00015	22.1	2.0	1	23	144	166	144	166	0.99
4	18	3e-05	0.0025	18.3	0.2	1	23	172	194	172	194	0.98
5	18	7e-06	0.00058	20.3	0.3	1	23	209	232	209	232	0.98
6	18	0.0087	0.72	10.6	0.0	1	23	299	322	299	322	0.93
7	18	0.037	3.1	8.6	1.3	1	20	334	353	334	357	0.89
8	18	0.26	21	5.9	0.3	3	23	421	441	420	441	0.98
9	18	0.0013	0.11	13.2	0.2	3	23	463	483	462	483	0.97
10	18	0.71	59	4.5	0.3	3	23	493	514	491	514	0.92
11	18	0.19	16	6.3	0.2	1	23	519	542	519	542	0.92
12	18	0.0057	0.47	11.1	2.9	1	23	618	641	618	641	0.97
13	18	1.9	1.6e+02	3.2	0.3	3	23	724	746	723	747	0.86
14	18	0.0019	0.16	12.6	2.6	2	21	759	778	758	779	0.93
15	18	0.0035	0.29	11.8	0.9	2	23	916	938	915	938	0.95
16	18	0.1	8.3	7.2	2.7	1	19	942	960	942	962	0.96
17	18	0.004	0.33	11.6	0.0	1	23	1001	1023	1001	1023	0.97
18	18	0.026	2.1	9.1	1.7	1	23	1030	1052	1030	1052	0.95

Sequence Information

Coding Sequence: ATGGGGGAGGCTGGCGGCCTCCTCTTCAAGGGCCACAGCTCCCGCCTCCAGCTCCTCATAGAGAAGATACAAGCCAATAAAGAGAACCACAACGTCACTGAGCAGGACCTCAAAGATGCTCTCGGAACGGAAGGTGTTTCGTCGTGGACGGGTTCTGAAGGTCAGAGTTCGCCACCGTCCTCCTGCGCGACGCCAAACTCCGCCACCGAACTCGCGGACTCAGAATTGGCATTCACAGTTGGCGTCACTGAAGCTACTCCCTACGCCTGTCAGTTCTGCGACAAAGCCTTCCCTCGCCTCAGCTACCTCAAGAAGCACGAGCAGACACACAGTGATCATCTGCCATTCATATGCGAGTTCTGCAAGCGGAGATTCAAACACAAAAGAAGTAAAGACAGGCACCTGAAACTCCACACTGGCGACAAACGGTATAAATGTTCACAATGCCAAGCTGCTTTTGCTCGCAGTGACCATCTAAAGATTCACATGAAGACGCACGACAATCAGAAGCCGTTCCAGTGCACAGTCTGTAACCGAGGTTACAACACTGCTGCCGCCCTCACATCTCACATGCAAAACCACAAAAAGTCCAGCGAGCCCGATACCTCGCCGTCGGGCAGCACATTCAAGTGTCTCGAGTGCTCCGAGGTATTCTCCAAACCTGAACTTCTCACGAATCACATGATGACGGAACATCAAGGAAATACCAGCAAAAGAAGAGCATCACCATCTCTAACCAAATTAGGCTGTATGTACTGCACGAAGGACAATTTTAGTTCGATGGAAGCACTCCAACTACATATTCAGGCAATGCATGGATCGATTTTGAAAGGAAGTCATCGTTATGgattttccaaaggtttataccTTCCAAACGGACTATCATCTACCGGTTACGCGTGTCGATTGTGCACCATGGTGTTCCCTTCATCAGGGACTCTGCAAACCCACGCAGCAGTAGCTCATGGCATACAGGAGCAAGTGAGTGGCGTTGAAGAGCATCAGTGCCCCCAGTGCAGCCTCAGTTTCCGCTCTCTCAATTCTTTCGCAGAGCATTTTGTCCTTTCCCATGGAGCACCTCCACCTGGAAGAAACAAGTCCTCCTCTGACCAAGTGCTCCCTACTGATCTCAGTGTCGTCCGCAAAGATCAAAACGACAAACCACCTGCCGTGAAGAAGAGTCGAGGTAGCGCTCATTCTACTGACTCACCGAGGAACAGCTCGCAGGTGGTGCAATATGACCATCCTGGAATACTGCTTTGCAATCAATGCAACGCAGCCCTCCCTGACTTCGAGTCGTTCCGAAGTCACCTGAAGAGCCATCTGGAAGAATCGACTTACAGTCCTGCGCCGCCTCCTCCCTCGCGCCTCCCCCAACTCAACATTTGCTCATACTGCGGAGCCCACCTACCATCCTCAGATGAACTGACCAGGCACATCGGCACCCATTTTCTGTCTACCATCACTGAATACGGATGCCAAAGCTGCTATCAGCTTTTCCAGAAACCTGAGGATCTTCAGAAGCATCTGCTTGAAACTCACGCTCAAAAATGGTACCGTTGTACCTTGTGCAAGGAATTATTCGAGTCTCAAGCGGCCATTCAGGTACACTTTGCAGTGAAACATTGCAGCGAAACTAAACAGTACCGATGTGCAGCATGTCCCAATGCTCCGTCTCTCCACTCTGAATTGGAGTTCAGCCTTCACGTCAGAGCAGTTCACTGTACTTACAGTCTGTCTCCAAATCCTCCTGTGGTTTCGTCGCCTAGGCTCCACAGATGCATATTCTGCAATTTGACCTTCAGCTCTGACATTGAGATGCAATTCCACTTGGCGGTTCACACCAAACTGTTTCAATGCCCGATGTGCAGTGAAGCGTTTCACGTGGAGTACTTCTTGGAAAAGCACATGCAGCTTTGCCATCCAAACCAGAATTCGTCTGTGAGACATGGATCCTACGAGAAGAAAATTCATGAAAGCGAAAAACCAGTTAATGGTTTCCATCCGCCTCCGTCCACTGTGGCCACCTTCAACATCAACGGCAGCACCGGCGCTGATATCAAACGGCCTGATATAGGCAGCCACCACACCAACCACAGCCacagcaacaacaacaacaacatcaacaacaacaataacaatatcAACAACAATAATTCCATCGGGACCTGCGATATTTGCGAAAGTGGAGAGTTCTCTTCAGAAGCTGAGCTGAACGCTCACAGAAAACTAGTTCATCATCTCAAAACGTCCACTTTGGCCAAAGTGAGCCTCCACTGTGCGTACTGTAAAGAGAGTTGCAAGTCGCGGTCTGAGCTGGAAAATCACATGAAAAGCTACTGCCAGGCTGCTATAGGTTCAAGCAAACACAAATGTAACATCTGCGACGAACTGTGCCTTTCTGCAGCGATACTGGCGGAACATAAATTAACACATTGCAAGGTTGTTCACGGGTCAACTTGCACGCACTGCAAAGCACTGATCACAGACGAAGACAGTTTTATTTCCCACTCCATTCAACACTCCAATTTGGGCACTGGTAACTCCCAGCAACTCGTCCTTCCCAACGCCTGCGTCATATGTCGGCAGACGCTGACTAGTGAGATGGAGACACGACTCCACGCGAAGTTTCATCTGCAAATGGATGTCGTCAAATGCTCCATGTGTCTACAGAACTATGAACGTGCTGAGCTGGCTGACGGAATTTGCAAATCATGCCACAAAAGGGCGAGACCTTCTTCTAGCATGTGCATGCACTGTCACATCCAGTTCGAATCAGCTTCGCTCCTTGAACTGCACATGGCTAAAATCCACAAACAATCGTTCAAATGCAGTAAGTGTAAGGAACATTTCGAATCTGAACGAGATTTTGAGAACCACAGCTCGCACGTATGCAGCGGTGACAAAGTATTCAAATGTCGTCTCTGCCTCCTCCTCTTGCCAGGGCCGACCCAACTCCAGTCCCATCTCATCGAGCACACGTTTGCTGGATGTCCGAACTTCACCTGCTACATCTGCAGTGCCGTCTTCACAACCGCTCCAGGCCTTCAAGGCCACATTTTGGAACACGGTCTGTCGGCACGGCCTTACGACTGCTCCAAATGCTCGCAGAGTTTTTTCTTCCGTGCCGAATTGGAGAACCACTCCTTCATGCACATTGAAAATGCATATCAGTCTTCAGAAAAAGTTGGGATCAATCGCTTTACTGACCCTCAAAGCGGCCCATTTAACGCCGATTCGGAAGAGAAAGATCTTGGGAAGAGccacgaggcagccagaccctCCCAGAATGGATTAAACTTGATCAAACACACCCACGCTCAACTGGCCGGAGGAACTCCTAACGAATCCAACAATACCGCCAAAGACAACGAGGAAGAACGTTGCACACTCGAAAGCTCCAGTGGTGTTGATACTTCCGGCATAAAAGTGGAAGCCCAGCATGCCGAACCAAAGTCAGACGTATCGGATCATGTGGATATCAGTGAAGTTTACTGTTGGGGAGCTCTGGAGATGGCGTGTGACACCCAATCAAAAACCGAGTGTAGGTGCCAAAgtTTGGACACGCTGAATCTACGACTCTGTTATTTGTACATACTGATAGGATCGTTGGTTATTTGCCAAACTGCTTTCTACATTTACTTATACTCGTACATATCCCGAGTTGAAAAATTGGTGGCAGACAATCTTTCAACTACCGGTGAAATGTACCGAATTAAAAGAGAAACGTCAGAACTGGACAACACCGTGTCCAAAGCCGGGGTTGAGTTCATCAACCCTAATCTACGAGAAAagatagaagaagaagacatCAAAAAGAACTCGACTGAGAATTGGGTTTGGCTGACATCTTATTCCAGAATACCGTTGTTGGCTATTCAAGGTTTCTGTCAAGCGTCGAAAGAGTACTGTCCAGAAGGAAAGGAAGGTCCTCAAGGCCCGAGAGGAATTCAAGGTGACAAGGGCGATCGAGGGAGCTCCGGAGAGAAGGGAGAGCGGGGATCCACAGGTGATCCTGGGCCTAGAGGTCCTATAGGGCCCCCAGGAGATACCGGCCCTCGAGGGCCTAAGGGAGACCCTGGGCCTATTGGTGGACCGGGTCTTGACGGTCGGGATGGGATTCCCGGAGAACCGGGGCTTGATGGAATCGACGGACGAAACGGAGCTGACGGAATTCCAGGCGACCCAGGGTATCCAGGCAAAGATGGCATCCCAGGAACTCCCGGCACTAATGGAACAGATGGGATTCCAGGACTTATGGGACCCCCAGGACCTGCTGGTGCCGTGGGACCAAAAGGTTCGATGGGCAGGATGGGAAGAACTGGTAAACCTGGCACGAATGGCATTCCGGGAACCCCTGGTATTCAAGCTTGGGCTATCACAGTGAACGGATCCACCACCAGTGAACTACTCATCCCTCCTGCGATAGTTGGTTCTGAAAGTTTGTTCCATTCCGGACCCATAGTGTTGAAAGAAGGTGAGAACGTTAGGATGAAATGTGCAGCGACTGGGCATCCAAGACCTGTAATTCAGTGGCGTATGATGGAAAAAGCAGCCATAGGTCTCGGAAAATGGAGAGAAACATCAGTGCAAGGAGCTTCGTTCAACATCACTCGAGTCACACGAGACCACATGGGAACGTACATGTGTATAGCGTCCAATGGAATACCTCCACCTGCCAACCAGTCCTTCGTACTTGATGTACAATTTCCGCCGACAATAAGAGTGAAGAACCAGTTCGTTACGTACAGGAATAATTCGGATGCTTCGCTAACCTGCGAAGTTGAGGCCTACCCTGAAGCAGTGAAATACTGGGAAAAAGAAGATGGAAGATTGGTGGAGCCTTCGGAGAAATATTCGTTTAGTACTACTGAAGTTGACAGATACCGAGCGATAATGACGCTAAACGTGTCTAATATCAACTTTAACGACTCTGGTGACTATAACTGTATCGCCAAGAGTGAACTGGACACCACGAAAGGGATCATTACCCTTGTTGAATATAGACCTGGAGCGATATACCAAGGAAAAGGAAAAGTTTTTGGAAAAGACGTTCCTGAAAGAGTTGACATCGACGATCTTTGCCCCGCTCACATCCCTTGCCAAGAGTGTCCAGATCCCAAGGAATTCAAGTGTAAAACTGGATTTTATTCGTACGAGCTATTGGGTGGGGAAAAACTCAAAGCGACTCCTCTGGAAAGTAACCACACATACCCAGGGCTACCAAATAGAACGCTGGAATGCCAGGTGTATGCTGTTGGAAAGCCAGTATTCGTGAAAACCTCTGACTCGAGTTATGGCAGCTGGATGAGAGATCCTCTCCAAAAGACAGACCCGGAGAAATATTGGGTGACGCGAGCTGAGGCTAACACGATCTTGTACGAGTATGGGAACAAAACAGCGTTCAGGAACAAtaccaaaagtaaaaattatACGCTGGAACATCCATTCACAGGTAACGCTCACACAGTTTACAACGGTTCGTTCTTCTACAACCAAGCTAATAAGCCGACTATTGTGAAGTATGAACTCAGCTCCATGAGGAGTCAAGTACTGCCGATACCCTTCGCCAACATTAACGAATCAAACCACCTCTACCAGTCGGACAACAACTTCATGGACATCTCAGCTGACGACAACGGGCTCTGGGTCATTTACGGCCTCCCTGGATCGAACAACACAGCTGTTCTAAAACTGGACGCGTACGCATTGGAGATACAGTACGCTCTGAACATCAGCGTCAAACACAACAAAGCCGGAGAGATGTTCATCGTCTGTGGGGTTCTGTACGTCGTTGAAAGTGTGATACATTATCGAACCAACATAAGATTTGCTTTTGATCTGTACAAATTGGAACCACTTCTTGACGTAAGCGTGGAATTCACAAACCCATTCCGAAAAACGACCATGCTTGCTTACAACCACAAAAATAAGGAACTCTTCACCTGGGATAGAGGTACTCAGCTAACCTATCCAATAAGATACAATGAAATTGGCTACAATCTCACCAAAGAAGACAGAGGAGAACCCGAAACCAATTACCTGGTTTCAGGCTATGAAGTCTACGATTGA
Protein Sequence: MGEAGGLLFKGHSSRLQLLIEKIQANKENHNVTEQDLKDALGTEGVSSWTGSEGQSSPPSSCATPNSATELADSELAFTVGVTEATPYACQFCDKAFPRLSYLKKHEQTHSDHLPFICEFCKRRFKHKRSKDRHLKLHTGDKRYKCSQCQAAFARSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKSSEPDTSPSGSTFKCLECSEVFSKPELLTNHMMTEHQGNTSKRRASPSLTKLGCMYCTKDNFSSMEALQLHIQAMHGSILKGSHRYGFSKGLYLPNGLSSTGYACRLCTMVFPSSGTLQTHAAVAHGIQEQVSGVEEHQCPQCSLSFRSLNSFAEHFVLSHGAPPPGRNKSSSDQVLPTDLSVVRKDQNDKPPAVKKSRGSAHSTDSPRNSSQVVQYDHPGILLCNQCNAALPDFESFRSHLKSHLEESTYSPAPPPPSRLPQLNICSYCGAHLPSSDELTRHIGTHFLSTITEYGCQSCYQLFQKPEDLQKHLLETHAQKWYRCTLCKELFESQAAIQVHFAVKHCSETKQYRCAACPNAPSLHSELEFSLHVRAVHCTYSLSPNPPVVSSPRLHRCIFCNLTFSSDIEMQFHLAVHTKLFQCPMCSEAFHVEYFLEKHMQLCHPNQNSSVRHGSYEKKIHESEKPVNGFHPPPSTVATFNINGSTGADIKRPDIGSHHTNHSHSNNNNNINNNNNNINNNNSIGTCDICESGEFSSEAELNAHRKLVHHLKTSTLAKVSLHCAYCKESCKSRSELENHMKSYCQAAIGSSKHKCNICDELCLSAAILAEHKLTHCKVVHGSTCTHCKALITDEDSFISHSIQHSNLGTGNSQQLVLPNACVICRQTLTSEMETRLHAKFHLQMDVVKCSMCLQNYERAELADGICKSCHKRARPSSSMCMHCHIQFESASLLELHMAKIHKQSFKCSKCKEHFESERDFENHSSHVCSGDKVFKCRLCLLLLPGPTQLQSHLIEHTFAGCPNFTCYICSAVFTTAPGLQGHILEHGLSARPYDCSKCSQSFFFRAELENHSFMHIENAYQSSEKVGINRFTDPQSGPFNADSEEKDLGKSHEAARPSQNGLNLIKHTHAQLAGGTPNESNNTAKDNEEERCTLESSSGVDTSGIKVEAQHAEPKSDVSDHVDISEVYCWGALEMACDTQSKTECRCQSLDTLNLRLCYLYILIGSLVICQTAFYIYLYSYISRVEKLVADNLSTTGEMYRIKRETSELDNTVSKAGVEFINPNLREKIEEEDIKKNSTENWVWLTSYSRIPLLAIQGFCQASKEYCPEGKEGPQGPRGIQGDKGDRGSSGEKGERGSTGDPGPRGPIGPPGDTGPRGPKGDPGPIGGPGLDGRDGIPGEPGLDGIDGRNGADGIPGDPGYPGKDGIPGTPGTNGTDGIPGLMGPPGPAGAVGPKGSMGRMGRTGKPGTNGIPGTPGIQAWAITVNGSTTSELLIPPAIVGSESLFHSGPIVLKEGENVRMKCAATGHPRPVIQWRMMEKAAIGLGKWRETSVQGASFNITRVTRDHMGTYMCIASNGIPPPANQSFVLDVQFPPTIRVKNQFVTYRNNSDASLTCEVEAYPEAVKYWEKEDGRLVEPSEKYSFSTTEVDRYRAIMTLNVSNINFNDSGDYNCIAKSELDTTKGIITLVEYRPGAIYQGKGKVFGKDVPERVDIDDLCPAHIPCQECPDPKEFKCKTGFYSYELLGGEKLKATPLESNHTYPGLPNRTLECQVYAVGKPVFVKTSDSSYGSWMRDPLQKTDPEKYWVTRAEANTILYEYGNKTAFRNNTKSKNYTLEHPFTGNAHTVYNGSFFYNQANKPTIVKYELSSMRSQVLPIPFANINESNHLYQSDNNFMDISADDNGLWVIYGLPGSNNTAVLKLDAYALEIQYALNISVKHNKAGEMFIVCGVLYVVESVIHYRTNIRFAFDLYKLEPLLDVSVEFTNPFRKTTMLAYNHKNKELFTWDRGTQLTYPIRYNEIGYNLTKEDRGEPETNYLVSGYEVYD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01365811;
90% Identity: -
80% Identity: -