Basic Information

Insect: Stenichneumon culpator
Gene Symbol: -
Assembly: GCA_964017025.1
Location: OZ024776.1:155282-158725[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.44 43 5.3 4.3 1 23 38 61 38 61 0.96

2 18 1.1e-06 0.0001 23.0 1.2 1 23 67 89 67 89 0.97

3 18 0.0017 0.16 12.9 2.9 1 23 95 117 95 117 0.97

4 18 2.9e-05 0.0028 18.5 4.2 1 23 152 174 152 175 0.95

5 18 6.3e-05 0.0061 17.4 1.7 1 23 188 211 188 211 0.98

6 18 0.00031 0.03 15.2 0.2 1 23 221 243 221 243 0.95

7 18 3.8e-07 3.7e-05 24.4 0.3 2 23 250 271 250 271 0.97

8 18 9.5e-06 0.00091 20.0 1.1 1 21 277 297 277 298 0.97

9 18 0.018 1.7 9.7 0.7 2 23 341 363 340 363 0.96

10 18 2e-05 0.0019 19.0 1.7 1 23 369 392 369 392 0.97

11 18 0.13 13 7.0 0.2 2 23 398 420 397 421 0.95

12 18 0.00011 0.01 16.7 0.1 1 23 425 447 425 447 0.97

13 18 0.0074 0.71 10.9 1.5 2 23 454 476 453 476 0.95

14 18 0.00096 0.092 13.7 2.1 2 23 497 519 497 519 0.96

15 18 0.0025 0.24 12.4 0.1 1 23 530 552 530 552 0.95

16 18 0.0095 0.92 10.5 3.6 1 23 558 580 558 580 0.94

17 18 3.6e-07 3.5e-05 24.4 1.7 1 23 586 608 586 608 0.98

18 18 3.6e-05 0.0035 18.2 0.3 1 21 614 634 614 635 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.44	43	5.3	4.3	1	23	38	61	38	61	0.96
2	18	1.1e-06	0.0001	23.0	1.2	1	23	67	89	67	89	0.97
3	18	0.0017	0.16	12.9	2.9	1	23	95	117	95	117	0.97
4	18	2.9e-05	0.0028	18.5	4.2	1	23	152	174	152	175	0.95
5	18	6.3e-05	0.0061	17.4	1.7	1	23	188	211	188	211	0.98
6	18	0.00031	0.03	15.2	0.2	1	23	221	243	221	243	0.95
7	18	3.8e-07	3.7e-05	24.4	0.3	2	23	250	271	250	271	0.97
8	18	9.5e-06	0.00091	20.0	1.1	1	21	277	297	277	298	0.97
9	18	0.018	1.7	9.7	0.7	2	23	341	363	340	363	0.96
10	18	2e-05	0.0019	19.0	1.7	1	23	369	392	369	392	0.97
11	18	0.13	13	7.0	0.2	2	23	398	420	397	421	0.95
12	18	0.00011	0.01	16.7	0.1	1	23	425	447	425	447	0.97
13	18	0.0074	0.71	10.9	1.5	2	23	454	476	453	476	0.95
14	18	0.00096	0.092	13.7	2.1	2	23	497	519	497	519	0.96
15	18	0.0025	0.24	12.4	0.1	1	23	530	552	530	552	0.95
16	18	0.0095	0.92	10.5	3.6	1	23	558	580	558	580	0.94
17	18	3.6e-07	3.5e-05	24.4	1.7	1	23	586	608	586	608	0.98
18	18	3.6e-05	0.0035	18.2	0.3	1	21	614	634	614	635	0.96

Sequence Information

Coding Sequence: ATGAAATATATCTACGAGATTATCCGCAGAGCTCCCCCGAGCACAGTAAATATTTATGTTCGATGTAGGTCACAGAGAACGCGAAGAAGTGGAAAGAAATCTCGGGCGGCTCACAAGTGCGGCAAGTGCAATGGTCGATTCTTCCACATGACAAAGCTGGTGGAGCACCTGAAGAATGTTCACGGAATCGAACGGGCGTTTCACTGCGACGAGTGCGGCAAGGCCTTCAGGAGTCCGTCGAACATAACGCGTCACAAGCTGATACACACCGGTGTGAAGAAATTCGTCTGCGATCTCTGCGACTGGTCGTGCAATCAGAAGAGCAATTTGGATTTTCATCGACGTCGTCACATGAAGGATTACGCTTTCAGCTGCGCCGCGTGCGACAAGGGTTTTCTTCTCAAGAGAGAGTGGGACGAGCACGTGGAGAACGTGCACACCGGCCGCAAGAAGCATCGGTGCGACGTATGCTCCAAGACTTAcggttacaaaaaaaatttaacagccCATTTGAGAATTCATCATCCGGAACTGATAATGGACGACATCTCGGCGATAAAGTACACTTGCAAGCTGTGTACACGTGGTTTCGTCAACGTTAGACTGCTGAACAATCACATGAAGAAACGACACGGTATCGTGAACCGCAAAATTCGCGAATTTCTTTGCGATCTGTGCGGCACGACAGTGTCGTCGAAGAAAGCTCTCGACGCTCACAGAAGAATCCACACCGGTGAAAAGATCGCGAGTTGCGAGATATGCGGCAAAGCCTTTGGCACCAAGGAAAATCTTAAAATTCATCGACGCATTCACACCGGTGAGAAACCGTATCGGTGCAATCAGTGCGGCAAAGATTTTACTCAGAGAACGTCTCTCGTTATTCACCTTCGCCATTGGGTGACCAATAACGATCGACATCCCGTCAAACCCGAGCTGTCGATCAAGACCGAGGATCAAGATATAATAGTCGACGGTATCGAAACTTCGCCGAACGCGGAAGAATACGAGGGTAGTCAGAAGAGGTGCGAGCTGTGCGGCGAAAAGTTTCATTTCGTAACGCGGCTTGTAGCACATCTCCGTATAGCCCACGGTATTCTGAGGCCGTTCAAGTGTCTTGAGTGCGACAAGACGTATCCCCACCAATTTCTTCTGAACGCTCACGTTAAGAAGATCCACACGCCGAAAACCGTGCCGTGCGGTGATTGCGGTTTCATGGGTGTGTCGATGGGTGACGTAGAGAGGCACAGAAAGCGCAATCACCATGTACAGCGTTACATATGCGAGATATGCAGTGAAAGTTTTACCGAGGAGTCGTCGCTGGTTACGCACACGGCGATGCACGATTTCATGGAATTTCAGCAGTGTCACGCCTGCGGCAGCACGTTCAACGACGCCCGTACCCTGCGGGACCACAACCGTCTGTATCACTACGATCCCGCGGCGGCCAACGACGCCCGATCCGTAAAGGTAGAGGATAGCCCGGAAAACCGTTGCGAAATATGTAACAAGATATTTAAGTACAAATCGATATTGAAACAGCACAGATCGAGGAGCCACGGTGAGCCGGCGATGTACGAGAAGCGTCGCTATCTGTGCGCTCTCTGCGGCAAGGAGCTCAAGACCGCAAAGGGATTGGAGATACACAACAGGTCGCACACCGGCGAAAAACCGTACACCTGCGAAGTATGCGGCAAGTGTTTCGCCTGCGAGACCCTACTCCGTACACACAACGTCACACACACGGGAGAACGAAAATACTCTTGCGACCAGTGCGGCAAATCATTTACTCAGCGTTCGACTCTCGTCGTTCACAAGCGCTATCACTCCGGCGAGAGACCCTACGTATGCACCCGATGCGGCAAGGGTTTCGTCACGCGAACTGTACTCAAAACTCACATGAAGTCTTGCCGTCTATAG
Protein Sequence: MKYIYEIIRRAPPSTVNIYVRCRSQRTRRSGKKSRAAHKCGKCNGRFFHMTKLVEHLKNVHGIERAFHCDECGKAFRSPSNITRHKLIHTGVKKFVCDLCDWSCNQKSNLDFHRRRHMKDYAFSCAACDKGFLLKREWDEHVENVHTGRKKHRCDVCSKTYGYKKNLTAHLRIHHPELIMDDISAIKYTCKLCTRGFVNVRLLNNHMKKRHGIVNRKIREFLCDLCGTTVSSKKALDAHRRIHTGEKIASCEICGKAFGTKENLKIHRRIHTGEKPYRCNQCGKDFTQRTSLVIHLRHWVTNNDRHPVKPELSIKTEDQDIIVDGIETSPNAEEYEGSQKRCELCGEKFHFVTRLVAHLRIAHGILRPFKCLECDKTYPHQFLLNAHVKKIHTPKTVPCGDCGFMGVSMGDVERHRKRNHHVQRYICEICSESFTEESSLVTHTAMHDFMEFQQCHACGSTFNDARTLRDHNRLYHYDPAAANDARSVKVEDSPENRCEICNKIFKYKSILKQHRSRSHGEPAMYEKRRYLCALCGKELKTAKGLEIHNRSHTGEKPYTCEVCGKCFACETLLRTHNVTHTGERKYSCDQCGKSFTQRSTLVVHKRYHSGERPYVCTRCGKGFVTRTVLKTHMKSCRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00414500;
90% Identity: iTF_00058121;
80% Identity: -