Basic Information

Insect: Stenichneumon culpator
Gene Symbol: -
Assembly: GCA_964017025.1
Location: OZ024781.1:3279952-3282468[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00067 0.064 14.2 3.8 1 23 316 338 316 338 0.98

2 15 0.0049 0.48 11.4 4.4 1 23 344 367 344 367 0.98

3 15 1.3e-05 0.0012 19.6 1.2 2 23 465 486 464 486 0.97

4 15 2.4e-06 0.00023 21.8 1.6 1 23 492 514 492 514 0.98

5 15 0.00083 0.08 13.9 0.8 1 23 520 542 520 542 0.97

6 15 3.9e-06 0.00038 21.2 1.3 1 23 557 579 557 579 0.98

7 15 7.2e-06 0.0007 20.4 1.2 3 23 587 607 585 607 0.98

8 15 2.8e-05 0.0027 18.5 1.4 1 23 613 635 613 635 0.97

9 15 0.00088 0.085 13.8 0.2 1 23 641 663 641 663 0.99

10 15 6.7e-06 0.00065 20.5 0.3 1 23 669 692 669 692 0.94

11 15 2e-05 0.0019 19.0 1.3 1 23 698 720 698 720 0.98

12 15 0.00044 0.042 14.8 4.7 1 23 726 748 726 748 0.98

13 15 6.6e-06 0.00063 20.5 0.2 1 23 754 777 754 777 0.96

14 15 5.3e-06 0.00051 20.8 0.9 1 23 783 805 783 805 0.97

15 15 3.9e-06 0.00037 21.2 4.5 1 23 811 833 811 833 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00067	0.064	14.2	3.8	1	23	316	338	316	338	0.98
2	15	0.0049	0.48	11.4	4.4	1	23	344	367	344	367	0.98
3	15	1.3e-05	0.0012	19.6	1.2	2	23	465	486	464	486	0.97
4	15	2.4e-06	0.00023	21.8	1.6	1	23	492	514	492	514	0.98
5	15	0.00083	0.08	13.9	0.8	1	23	520	542	520	542	0.97
6	15	3.9e-06	0.00038	21.2	1.3	1	23	557	579	557	579	0.98
7	15	7.2e-06	0.0007	20.4	1.2	3	23	587	607	585	607	0.98
8	15	2.8e-05	0.0027	18.5	1.4	1	23	613	635	613	635	0.97
9	15	0.00088	0.085	13.8	0.2	1	23	641	663	641	663	0.99
10	15	6.7e-06	0.00065	20.5	0.3	1	23	669	692	669	692	0.94
11	15	2e-05	0.0019	19.0	1.3	1	23	698	720	698	720	0.98
12	15	0.00044	0.042	14.8	4.7	1	23	726	748	726	748	0.98
13	15	6.6e-06	0.00063	20.5	0.2	1	23	754	777	754	777	0.96
14	15	5.3e-06	0.00051	20.8	0.9	1	23	783	805	783	805	0.97
15	15	3.9e-06	0.00037	21.2	4.5	1	23	811	833	811	833	0.99

Sequence Information

Coding Sequence: ATGCCTTATGTTAACGGAGATGCGAACAGGCAAGGGATGATAATCAAGGAAAATGAACATACAGATTCGTGCAGCAAAATTATTTCTACTGATAACAAGACTGAAACAGCTAACGGAGCTCACTGTCGTATATCACCGATGAGGATAAATCACCGGGCTCAAATAGACGTTATTGATATGCGACAGAAAGATTCAACGATCTACAATAATCTATTGATATACGAAGAGCAATACTCGAAATTTATCATTCTCAGGGCTCTGAGAAGCTCTGATCCCAGGGAGGTCGCCGCTGAACTAGCCGACATAGTAACGACGATCGGTGCGCCACGAATAATTCAGAGTGGTAATGGTCGCGAGTACGCGGAGCAAGTTGTACGGGAGATTCGTACATTGTTGTGGGACTTTTGCGTCGTGCACGGTGATGCCGCAAAAAACGGTGCTGCACGCCGAGATCTCAAGGGTTCGGTGAAATCGTGGATGGAGAAGAATCCCGGAAAATCTTGGCACGAGGGTCTGAAGACACTTCAAGTCCTCGAAAATACATCGATCAATTCGCAAAACGGTACAATCCCGAGTCAGCTTTTCTTCAGTAGAAATATTTGTGACGATTTGCGAAGGACTATTGGAGGCAAAGGATCGCTGAGTAATACAGCTTCAGAGGAGGATTCGTTCTCGGTTGTCTCGAGTATGCGTGATTCGTTTGCTTTTTCAAAAACAGATCCGTGCCAGGTTTCGATAGGCAGAGCGGTGGATATTGCTAGGGAAAACGAGAATCACTCCGGAAGCATCGAGTGTAGAGAAGAGATCGATAATAAATCGTCAACAAAGGAAAACGCAAATATCTTCAATTTCGTGAGCATCAAGAGTGAGCCACCGAGCGTAACGGAGTACATCACGGAGCTTCATTCCGACAAGGAAGAGCGCATTGACTCTGAAAAATACAACTTCAGATGCAAAATATGTCAGAAGCAATACATGAAACTCGGTCATCTGAGAAATCACACGAGAGCCCACGCAAAAATCGGAAACTACGAATGTACGATCTGCTGCAAATCATTCAGACTGTCGAGTCTCTACGACAGGCATATGCAGAGATTTCACCTGAATGACAAAAACCCGACTGTCGGTGCGCGCGAAAGATTGGAAGAAAACGAGAGAGATCATGAAAATAATGGGAAAAGGAATAACAAAGATCAGAAAATGGGGcgtaaaagaaaatgtatgcCAGAAAAATCTAAGCCAATCAAGTCTGTGCCGGGCAAGGAGAAGATATCACCTTTGTCGTTAGTATTGTCAAGGATTTCTTCGAAAAGGTCGTCTAAACGTTCGAACTCTGTTTTCAGGAGAAAGGTGCGTAACTCAACGACCAAACTCAACGGTAATCCCCTGCTTGAATGTTCATACTGCAAGCAAACATTCACCTTCCCTAGCGTGCTGAAGAGACACGTACGTTCCCACACGAACGAGAGGCCCTACGTTTGCCAGGTGTGCGGCAAAAGTTTCAAGCAGCTCGGTCACCTGAGCCAGCACTCTCTCACTCACACTGACTATCGTGCATTCCAGTGCACGATGTGCGACATAAAATTCGAGTCGCTGGACGCCTTCAAGCTTCACTCGCAGTCGCACAAGAACGAAGCTTTCTTCAGGGCCAAAGAGGCTTATCGGCTTTTCGAGTGCGACAGTTGCAAGAAGGTATTCACCACGAAGAGCGTTCTCGAGCGTCACATATTCACTCACAGCCATGAGCGCCAGTTCGGCTGCAAGGTGTGCGGCAAGAGATTTAAACAAGCGGGTCACGTCAAGTCGCACATGCTCGTTCACACCGGCGAACGAAAGTTCGCCTGTAGCGTGTGCTCGAAGAGATTCAGCCTCTCGAATTCGCTGAAGAAACACATGTACGTTCACAATGGTGAGAAACCATACCAGTGTGACGTGTGCGGTGCGAGATTTCTCGAAAAGCGTAATCTCAATGGTCACCTCATGACTCACACGAACGAGAGACCTTTTTCGTGCAAAATTTGCGGCAAACGCTACACACTAGCGGACACTCTTCGCCGTCACATAAGCGCCGCACACGAGGACGGTCGGACATACCAGTGCGAAATCTGCGCGAAAATGTTCAAGCAACTGGCTCACCTGTCGGTTCACAAGAAGGTCCACAACGACGAGAGACCCTTTCAGTGTCATCTCTGTGAGAAGAATTTCAAACACAAGAACGTACTCAAGTCCCATCTGGCTATCCACGCCAACGTCAGGCCTTTCGAGTGCGACGTGTGCAAAGCCACCTTTGTACGTAAGACTAATCTTCAGACCCACATAGCTTCGGCTCACATGAACGAACGTCCGTACGTATGTACAATTTGCAACAAACGCTTCAAGCAGATAAGTCATCTGAACGGTCACATAGTAGTTCACAGCAACTCCATGCCTTATCAGTGCGATTTTTGCGATCGTCGATGCAACAGACTGGATAATCTGAAAAAACACATGAGACTGCATACAAAAAACAAGGAAtag
Protein Sequence: MPYVNGDANRQGMIIKENEHTDSCSKIISTDNKTETANGAHCRISPMRINHRAQIDVIDMRQKDSTIYNNLLIYEEQYSKFIILRALRSSDPREVAAELADIVTTIGAPRIIQSGNGREYAEQVVREIRTLLWDFCVVHGDAAKNGAARRDLKGSVKSWMEKNPGKSWHEGLKTLQVLENTSINSQNGTIPSQLFFSRNICDDLRRTIGGKGSLSNTASEEDSFSVVSSMRDSFAFSKTDPCQVSIGRAVDIARENENHSGSIECREEIDNKSSTKENANIFNFVSIKSEPPSVTEYITELHSDKEERIDSEKYNFRCKICQKQYMKLGHLRNHTRAHAKIGNYECTICCKSFRLSSLYDRHMQRFHLNDKNPTVGARERLEENERDHENNGKRNNKDQKMGRKRKCMPEKSKPIKSVPGKEKISPLSLVLSRISSKRSSKRSNSVFRRKVRNSTTKLNGNPLLECSYCKQTFTFPSVLKRHVRSHTNERPYVCQVCGKSFKQLGHLSQHSLTHTDYRAFQCTMCDIKFESLDAFKLHSQSHKNEAFFRAKEAYRLFECDSCKKVFTTKSVLERHIFTHSHERQFGCKVCGKRFKQAGHVKSHMLVHTGERKFACSVCSKRFSLSNSLKKHMYVHNGEKPYQCDVCGARFLEKRNLNGHLMTHTNERPFSCKICGKRYTLADTLRRHISAAHEDGRTYQCEICAKMFKQLAHLSVHKKVHNDERPFQCHLCEKNFKHKNVLKSHLAIHANVRPFECDVCKATFVRKTNLQTHIASAHMNERPYVCTICNKRFKQISHLNGHIVVHSNSMPYQCDFCDRRCNRLDNLKKHMRLHTKNKE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00058119;
90% Identity: iTF_00058119;
80% Identity: -