Basic Information

Gene Symbol
ZNF236
Assembly
GCA_964017025.1
Location
OZ024774.1:19342817-19357093[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 0.001 0.1 13.6 1.4 2 23 201 222 200 222 0.96
2 28 4.4e-05 0.0042 17.9 0.6 1 23 228 250 228 250 0.98
3 28 7.7e-06 0.00074 20.3 0.3 2 23 256 277 256 277 0.97
4 28 0.0088 0.85 10.6 0.2 3 23 285 305 283 305 0.96
5 28 8.6e-05 0.0083 17.0 1.0 2 23 316 337 316 337 0.98
6 28 1.7e-07 1.6e-05 25.5 1.5 1 23 356 378 356 378 0.99
7 28 3.9e-05 0.0038 18.0 0.6 1 20 384 403 384 406 0.96
8 28 1.4e-05 0.0013 19.5 0.5 1 23 412 435 412 435 0.97
9 28 0.0027 0.26 12.3 5.4 1 23 444 467 444 467 0.98
10 28 2.4e-06 0.00023 21.9 1.9 1 23 582 604 582 604 0.98
11 28 0.00073 0.07 14.1 1.7 1 23 610 632 610 632 0.99
12 28 0.031 3 8.9 4.5 1 23 638 660 638 660 0.98
13 28 8.4e-07 8.1e-05 23.3 2.6 1 23 664 686 664 686 0.98
14 28 0.00041 0.039 14.8 3.6 1 23 741 763 741 763 0.98
15 28 0.00012 0.012 16.5 4.6 1 23 769 791 769 791 0.99
16 28 7.8e-05 0.0075 17.1 0.8 2 23 798 819 797 819 0.96
17 28 0.00013 0.012 16.5 7.2 1 23 825 847 825 847 0.98
18 28 0.00012 0.012 16.5 2.9 2 23 1160 1181 1159 1181 0.97
19 28 0.027 2.6 9.1 3.6 2 23 1208 1229 1207 1229 0.97
20 28 0.0018 0.18 12.8 2.2 1 23 1235 1257 1235 1257 0.98
21 28 0.039 3.8 8.6 0.1 2 23 1264 1285 1263 1285 0.96
22 28 1.2e-07 1.2e-05 25.9 1.4 2 23 1362 1383 1361 1383 0.98
23 28 0.06 5.8 8.0 5.5 1 23 1389 1411 1389 1411 0.98
24 28 0.0013 0.13 13.2 3.9 1 23 1417 1439 1417 1439 0.97
25 28 8.6e-05 0.0083 17.0 2.8 1 23 1445 1467 1445 1467 0.99
26 28 0.0003 0.029 15.3 1.9 2 23 1689 1710 1688 1710 0.97
27 28 2.8e-05 0.0027 18.5 3.3 1 23 1716 1738 1716 1738 0.98
28 28 7.4e-07 7.1e-05 23.5 3.0 1 23 1744 1767 1744 1767 0.96

Sequence Information

Coding Sequence
atgttgaccgAAGAAGCTCAACTTTTGGAGCCAGTCCCTCTTGGCGTTGACACCATGCCGCTGGGTTTTGTTATTTCTGACGACGGACGAACACTGCTGGCAGTGTCAGGTAGAACCGTATGTACCGCCGACACTTGCCCACTTCTGCCAAAGCATTTACCAGAGAATTGCCAGAATCACTGGACCGGCTTACATTCTGGAAACGGCGTTATCGAGTTAATGACTACACCGGTTGCATTTATTCAACAAAAGGATACAATTGTTAGACCAGCGATTAAAATGAATAATGCAACACCCCTCGTCAATTCGccTGTATTTCAAATTAGTTTGGAGAATTTTACCACAACAAGTATTCAGCAAACAACTTTACTTCCATCCGAGAGCAACGATACTGTATCAATCATAATGCAAGAGAATGTGAATACTCACATAAAAGGAGCCAGTAGCCAGCTCCATAACAGTGCATCACTTGCCTGTGAAAAAGGCGAAAGTTTTGCAACTAGCAGCATTGAGTCTGGTAACAAAATTCCTGTCAAAAGAAGTCCTGGAAGACCTCGAAAAGATGTCAATTCGCTGACCTCTAATACCGCTAGCAAAATAAGATGCGAGATTTGCGGCCAAGAATTTACGCGACAGTTGGTGTACAAGAAACATATGGAGCATCACGCAGAGGAGAAGCCGCACAGGTGTCCAAAGTGTCCGGCGTCGTTCAATGTGCCTACGAATTTCACGCTTCACATGGCGACGCATAATACCGGAGAGCCGAAATGTCCCGAATGCGGCAGAAGATTCGCAAGAATGGCCAGTCTGAAGTCACACATGCTGCTAcacgaaaaagaggaaagTCTCTTTTGTACTGAGTGCGAAGATGCATTTTCAACAAAGGCGCAACTTGATGCACATTTGAAGCTTCACAATGAGAAGTGGACGACCGAAGATGTACGAAAGTGCAAGCTGTGCAACAAGCAGTTTACACAACCCGCTCTCTACCGTCTTCACATTAGGGAACATTACAGGAGCAAAATAGTGAAACAAACGAAACGAGGGTCAAGCCACAAAACAATGTACAAATGCAAGATATGTTCGAAATCCTTCCAAAAGCCAAGCCAATTGATGCGCCATATAAGGGTGCACACCGGAGAGAAACCGTTCAAATGTACAGTCTGCACCCGAGCGTTCACGCAAAAGGGATCTCTACAGATTCACATGTGGCAACACATCGGTGTTCGTCCGTACAGTTGCCAATTTTGCAACGCTAAATTCAGCCAAAAAGGTAATTTGAACGCTCACATCCTGAGGGTACACAATGCACCGGAGGGTGAGCCTATTTACAGCTGCACGCATTGTACGTGTGTATTCAAAAAGTTGGGAAGTCTCAACGGTCACATGAAGAAAATGCACTCTAATCCAACGGAGGAACCTTCGCAAAAATGTGATAGCTCTACGGAAGCTGATATGCGAGTCACCGTCGACAATGTTATTTCCCAGTTGGCATCGCTCGACGggaatattaaaaatcaaGCCGATTCTACAGATCCGGAATTAACGTCGCCATGCAAAGACGACATTCTCCAGCAGGCTCTGAAAAACAGTGGGTTACCAAGCAAGACAAAAGCTGAAGAGTCGTTAAGCAAAAAAGCCGATGCACAGACGTCGTTTGTTACACTGTTGGACAGGGCGCCCGATGGTTCATTGAGGAGGTATCTCACAATAAAACAACGGTGCATCGGAAGCATAAGATGGTATGCCTGTTCCTTCTGTCATAAAGAATTCAAAAAGCCATCGGATCTCATACGACACTTGCGAGTACATACGCAAGAAAAACCATTCAAGTGTTCATTCTGTTATCGATCGTTCGCGCTAAAGTCGACGATGATAGCCCACGAGAGGACGCACACCGGTACGAAGAAATATGCGTGCAATGCATGTGAAAAGACGTTTAGTTGCCATAGTAGCCTTGTATCGCACACGCGAACCCACGGGAAACCCCACAAGTGCGATATATGCGATAAATCGTTCAGTACGAGTTCCGTACTAAAGAGTCACATCAAGAGTCATACAAAGGGCAAGTCAAAGATATCGCCAGAAGCTGAAATTCTCGTACCGCAAATCATTCTCGAGGAACCACTCATAATCAGCGACGCTGGAAATAAAATTAGCGTTGCTCAGGTTCAATCGAAACAAAAACAGGTTTACGATAACGCTGACATCGCGAGGCCTCACAAATGTTGGGTTTGTCCAGCGGCGTTTAGAAAAATAAGTCATCTTAAGCAACATTATCGAAGGCATACCGGAGAAAGACCCTACAAGTGTCTCAAGTGTGACAGgaGATTCACCTCCAACAGTGTACTCAAATCGCATTTGCACACGCACGAGGAGTCGAGACCCTGGAGTTGCTCTGTTTGCAACGCAAAATTCTCGACCCAAAGTAGTATGAAGAGGCACTTGGTTACTCACAGCAACAAGAGGCCCTTCATGTGTCCCTACTGTCACAAAACTTTCAAGACGTCGGTCAATTGTCGGAAGCACATGAAGATTCATAAAACCGAATTGGCGCAACAGCAATTGGAGCAACAGAGAACGCACCGAGACATCAGAGTCTTATCGATCAAGGAAAAAGAAGTGATGTCAGGATTGCCGGAGAATTTGACACTTGGCGAGGAGATGGGAGTGACGTTTCAATCGCAAATTGCGCCCGACTTTACTCAGGCGTTTGACGATCAATTTCACGCTATTACGGATGATAAGGAGAAATCATTTCTAACCGATGGAGGAATAACTACTCAAACAATTGACAATCAGACTTTACCCGTGGTAGATACAGATAACTTAGGAACATCCCAGACCTTGCATGCTGACGAAACGGGCACTATTACGCTACCTAACTACTCCGGAGATCAAACACTCACGCCAGAGAGCATACGCGAGATCGAGGAAACGTTGAATCAACAATTGTTTAATATCGGAATGAACGATCCAAGCTCTGTGCCTCTCGAGCCGAGGGATCAGCCGGTATTGAATATTGTCTATGACAACGCGAAGGGACTGGACTCGGTCAACAATGCCTCACTGAATGCAAACATTTTTCCCTCGCATTTTGATACCTTTGACATGAATCAAATAACCCTTCAAACGGACGCGGAAATTGATATGGGTATCAGCACGGCCAATTCAACAAGCATGGCAAGCATCTTACCGCGATCGGCTCAAGAAGGGCAGCCCCTCGTTCCCGTGGCGACCGGCACCAATGCGAACGATTCGCCAAATAAATTGTCTCGGCATTTGATGGTTGTAAGTTCGATGCAAACGTGTCGCGAGCTGTCGAGGCCCGTACAAGCTTGTCCAAAATATCTGAAAGTCATAGCAAAAGCTGATACGACGGACAGCGCCGAAGTTCTCAACATCGACTGTGAATCGAATCAACGAAATACGACGGTATGTCCGTCGAGTAGTCCGGAACATGAGTCGATTATATTGACGTGTGATCTGTGCCACAAGCGATTTAAAAATCAACAACTACTGGAAGATCATCGAAAGGTTCATTCTCTGACTAACAAGATTGGACAGCTAACCGAAACAAATGAACGATCGTCGATCATTCTCGAGCCAGATTCCCTGCTCCAATGTCACATGTGCAGCAAAAAAGGTTTCACAACGGAAACATTGAAGAATCACTTGAACACACATCGAGGGACAAAGGAATTTCAATGCAGCGCGTGTTCGTTGAGGTTTTGCTCAAATGGAGGTCTCAGCAGGCATTTAAAAATGCACGCGAGTAAATCCCAATGGAATTGCTCGATTTGCTTCGAATCGTTGCCAAATGAAGGGCAGCTCAAGGAACACGCGAAAATTCACGAGAATATCGGATGGAAGACCGGCTCGGCTGAAGCGGATAGTTCGCAGAAGGAACCGATATCGATAAATCCCGCCGATTTCTTGGTCGTAACGTCAGCGAGCGGCAACACGACTGCAGATGCTTCCATCTCCGAGAAAGTTCTGATGGACACCGTAGCGGAGCGTCAGATTATTAATCGTTCATCCGGCAATCCTGAATTGAACACGGAGAAAAAGGAATATACAAACAAATGTAAATACTGTCCGAAAACATTTCGGAAACCTAGCGATCTAATAAGACATGTTCGGACGCACACAGGCGAACGACCCTATCAGTGCGAGTTCTGTAACAAAAGTTTTGCAGTCAAGTGTACACTCGATTGTCACATGAAAGTTCATTCGGGACAGAAAACGTTTTGCTGCCACGTGTGTAACAGCTTATTCGCTACTAAAGGGAGCCTCAAGGTCCACATGCGATTGCACACTGGTTCCAAGCCCTTCAGGTGTCCAATGTGCGACTTGCGCTTCAGGACTTCCGGACATAGAAAAGTTCATCAACTAACGCATATGCGAGAGCAGAAGGGAGGCGCAAAGCGAAAGCCCAAGCAATTGAAGGTCGCTGCCATCGCTAATGCGGTAGCTGAGATGGAAAAAACAGTCGCGAATTCTGTCAACATCAGAGTCGAAAATGAAGAAACGTCTGTGACTGAATATCCGGATCTGGATACAATTACGATCGACGCGAGCGGTGTAACGGATCAAATAACGTTCAACGCCGATGGAACCATATTAAACAACAACTCTATGCTGTCTCTCAACGAGAGTAATCAGCTTGTGGCAAATCTGCACTTTCTTCTCGCTAATGGCCTTGTTACTATTCAAGCGGACGACTCTCTGTTGACTCAAACGGCTGGTGAACGGGAAACGAACGTGATCGACAACGAGACCGGTGTCACTAGTCTCATCGAGCCAACAAACAGCAACCTCTgtcaacagcaacagcagaaTACTTTTAATGGCAATTCCACGGAAAACCTTGTTATCCCGACACCGTTGGCTGGTCTTGGAACGGACCAGCTTGACAAGAAACAGACGATGATGCAAATGAATGAATGCATGACTCTTGTACAAATGAATGCGGTTCCTACTTCCGGAATGGAAGAGAAACTCCAGGTTCAAGTAGAACAACTTCCGAAACAATTGTTAGGAAAGGCAAGTGCCTCGAAGAAAGAATGTGATATCTGTGGCAAAACATTTATGAAACCCTGCCAAGTGGAGAGACACAAACGAATTCATACCGGCGAACGGCCGTACAAGTGCGAATTGTGCTCAAAGTCATTTGCTCAGAAAGCAACGTTACAAATGCATCAGAAGCACCACACAGGTGATCGACCTCATCCCTGTCCTCACTGTGATTACTCGTTTACGCAAAAAGGTAATCTTCAAACTCATCTTAAGCGGGCTCATCAGCTCGATACACTGGACGTTAAAAAATTCCGACGGGGACAACAGCAACAAATTTTGAGCGCAAAATTAATGCAGGATCATTTTGACGACGGCAGAATATTGAATTTCGATGATATATCCTTTGTTgagttattaaaataa
Protein Sequence
MLTEEAQLLEPVPLGVDTMPLGFVISDDGRTLLAVSGRTVCTADTCPLLPKHLPENCQNHWTGLHSGNGVIELMTTPVAFIQQKDTIVRPAIKMNNATPLVNSPVFQISLENFTTTSIQQTTLLPSESNDTVSIIMQENVNTHIKGASSQLHNSASLACEKGESFATSSIESGNKIPVKRSPGRPRKDVNSLTSNTASKIRCEICGQEFTRQLVYKKHMEHHAEEKPHRCPKCPASFNVPTNFTLHMATHNTGEPKCPECGRRFARMASLKSHMLLHEKEESLFCTECEDAFSTKAQLDAHLKLHNEKWTTEDVRKCKLCNKQFTQPALYRLHIREHYRSKIVKQTKRGSSHKTMYKCKICSKSFQKPSQLMRHIRVHTGEKPFKCTVCTRAFTQKGSLQIHMWQHIGVRPYSCQFCNAKFSQKGNLNAHILRVHNAPEGEPIYSCTHCTCVFKKLGSLNGHMKKMHSNPTEEPSQKCDSSTEADMRVTVDNVISQLASLDGNIKNQADSTDPELTSPCKDDILQQALKNSGLPSKTKAEESLSKKADAQTSFVTLLDRAPDGSLRRYLTIKQRCIGSIRWYACSFCHKEFKKPSDLIRHLRVHTQEKPFKCSFCYRSFALKSTMIAHERTHTGTKKYACNACEKTFSCHSSLVSHTRTHGKPHKCDICDKSFSTSSVLKSHIKSHTKGKSKISPEAEILVPQIILEEPLIISDAGNKISVAQVQSKQKQVYDNADIARPHKCWVCPAAFRKISHLKQHYRRHTGERPYKCLKCDRRFTSNSVLKSHLHTHEESRPWSCSVCNAKFSTQSSMKRHLVTHSNKRPFMCPYCHKTFKTSVNCRKHMKIHKTELAQQQLEQQRTHRDIRVLSIKEKEVMSGLPENLTLGEEMGVTFQSQIAPDFTQAFDDQFHAITDDKEKSFLTDGGITTQTIDNQTLPVVDTDNLGTSQTLHADETGTITLPNYSGDQTLTPESIREIEETLNQQLFNIGMNDPSSVPLEPRDQPVLNIVYDNAKGLDSVNNASLNANIFPSHFDTFDMNQITLQTDAEIDMGISTANSTSMASILPRSAQEGQPLVPVATGTNANDSPNKLSRHLMVVSSMQTCRELSRPVQACPKYLKVIAKADTTDSAEVLNIDCESNQRNTTVCPSSSPEHESIILTCDLCHKRFKNQQLLEDHRKVHSLTNKIGQLTETNERSSIILEPDSLLQCHMCSKKGFTTETLKNHLNTHRGTKEFQCSACSLRFCSNGGLSRHLKMHASKSQWNCSICFESLPNEGQLKEHAKIHENIGWKTGSAEADSSQKEPISINPADFLVVTSASGNTTADASISEKVLMDTVAERQIINRSSGNPELNTEKKEYTNKCKYCPKTFRKPSDLIRHVRTHTGERPYQCEFCNKSFAVKCTLDCHMKVHSGQKTFCCHVCNSLFATKGSLKVHMRLHTGSKPFRCPMCDLRFRTSGHRKVHQLTHMREQKGGAKRKPKQLKVAAIANAVAEMEKTVANSVNIRVENEETSVTEYPDLDTITIDASGVTDQITFNADGTILNNNSMLSLNESNQLVANLHFLLANGLVTIQADDSLLTQTAGERETNVIDNETGVTSLIEPTNSNLCQQQQQNTFNGNSTENLVIPTPLAGLGTDQLDKKQTMMQMNECMTLVQMNAVPTSGMEEKLQVQVEQLPKQLLGKASASKKECDICGKTFMKPCQVERHKRIHTGERPYKCELCSKSFAQKATLQMHQKHHTGDRPHPCPHCDYSFTQKGNLQTHLKRAHQLDTLDVKKFRRGQQQQILSAKLMQDHFDDGRILNFDDISFVELLK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00905566;
80% Identity
-