Scul011814.1
Basic Information
- Insect
- Stenichneumon culpator
- Gene Symbol
- lov
- Assembly
- GCA_964017025.1
- Location
- OZ024773.1:18566470-18569095[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.2e-16 5.6e-13 48.8 0.0 1 44 551 594 551 595 0.95
Sequence Information
- Coding Sequence
- atgtcgagcgcCGCGGAAAGTCCCGACGCTACAATGGCACTTCAGTCGCATTACTCGCTGCGATGGAACAACCATCAGGCCCACATACTGCAGGCCTTCGAGGCTCTCCTGCACGCCGAAATTCTCGTCGACGTCACACTCGTGTGCTCCGAAACGAGCCTCAGGGCGCACAAGGTCGTCCTAAGTGCCTGCAGTCCGTTTTTCGAGAGGATATTCGCCGAGCACCCCTGCAAGCATCCGGTGATAGTGCTGAAAGACTTTCCCGGTCGTGAGGTAGCGGCCCTGATAGACTTCATGTACCGCGGCGAGGTGCGAGTGGGAAGGGAAGAATTGCCGGGTCTGATGAGAGCAGCGGAGAGTCTACAGGTGCGTGGATTAGCGTCCTCGGAGCCAAGACCGGCGAGTCCACCAGAAACACCGACGACGGATTTGCTCGGTGAGCCATCGACCCCGGAAGGCGCGAGACAGGGAAGTCCCCCGGTGGATGAGGACAATCTCGAAACAACAGCGACGAGGATAGACTCGCGGGGCGGTATAGTTCAGAGGGAGCACCGGCTGCCGCACATGGGACACCTGAATTTTTCCGTGCGGGATCTGAGGGAGTTGTGCGGTTCGCCGCTGATGCCGAGGAGAAAGCAGGCGCGACCGAGAAGAAGATCCGGCGAGTTGGTCGCGCAAGATCTGAGCAGACCTCACCCACCGCCGAGTCTCAGTCCGCCGAGCGGTTTGAATCTCTCGGGCGCGAGTCAGCAGAGGCAGGAGTCCCAACAGCAGAGCACCTCCTCCTCGAGCGCCACGCCTGGcggcaacaacaacaacaacaataacaacaacaaccaccacagcagcaacaacaacaacaacaaccatCAGAGTCAGCAGCGCGAGGACATAGCGGAGAATCTGTCTCTGAAGAGGTCCCACTCTCCGGCTTCGCCCTCCGACCACCAGAGTCGCATAAAGATGGAGCGGGACCCAACCAGCAGTCCCCGATGTTCCCCACTGACCGGCACGAGTCTTCATCCGGACGGCAGTCTCCAGGATCTCCCGGCGGGCGGTCTCTCGGCGATGTCGGCGCTGTCGCTGACACCTCCGCACCATCACAGCGAGTACCTGACGAGCCTCGGCCAGCTCGCGGCTCAGTGGCTCCCGAATCATCCGAGCCAGTTGCAAGCGAGCCAGGCAGCGCACCACGCGAGGGAGGGCAGTCCTCAGCAGCACGGTCGCAGCCAGCACAATCCttaccagcagcagcagcagcagaggGAGTCCCAGCAGTGTCGCGAGCAGCAGGAACAGCACAGACAACAGCAGGAGCAAGAGTCGTCGTTGCCCCCCATAAGATCGGTCGCCGTTTTTCCCATGGACGGAATGTCGCCGGTCGGTGGGGCGGGCAGTTTGTTTCCTCACGGCGGAGGTCTCGATCGGGGAACCCTCCTCGCCGATCTTCACGACAGCTTCAAGCCCGAGACACTTCACGGTCTCTTCGGCGGGGCGAGCCTCGGCCATCATCCGGGAAAGAAGCTGAAGAAACACCGGAGCGAGAGCGGCGGCGCTCGAAGATGGGCCGATCACGGACGCGGAGGAATGCCCATCGGAAGACCCAAGGGCCAGCACAGCGCGCCGCGCGGCGGACCACCAAGGTCCTGGACAAACGCCGAGCTTACGATAGCGCTTCAGCACGTTTGGAACAAGCAGATGACGACGTCGCAGGCCAGCCGAATGTTCGGTATACCTTACAACAGCCTGCTCATGTACGTCCGGGGCAAATACGGCAAGAGCCTGAAGCTGGAACAACTGAGGAGGGACTGCACAGGAGCGACGACCGGCGAAGTCATGAACTCGCTGAACAACAACGTCAAGGCCATTCAGGGACCCCCGCCGATGAGTCATCCCCTCGCCGGTCTGCCCCATCCCGGCGACGAGGGCAACTTTCCTCATCATCCGTTGCTCGGCGGAAATTTGCCGCAGGGTTTCTTCCCGGACTACAGCGCCGCGTTTCCGGTACCGGTGAGTATGGTCCATCTGCTGCCGCCGAGCGAACAGAAAGCCCTCGAGTCCTCGACGAATCCCGGTGGCGGCAGCAACGCCCCCGGCAGTTGTCCGCCCGGCAGCGGGAGCAGCGTCATCGGTTGTCCGACCGGCAGCCCACCGGGCAGCGACATGGCCCACGGAAGTCGCACGCCCTCGCCATCGGACAACATCCACAATCACGAgacctcctcgtcgtcgatgcCACCCCAGGCGCCCCAATCGGCACCCGCGTTGCTCCAGCAGAACGGCTCCGATTGA
- Protein Sequence
- MSSAAESPDATMALQSHYSLRWNNHQAHILQAFEALLHAEILVDVTLVCSETSLRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFPGREVAALIDFMYRGEVRVGREELPGLMRAAESLQVRGLASSEPRPASPPETPTTDLLGEPSTPEGARQGSPPVDEDNLETTATRIDSRGGIVQREHRLPHMGHLNFSVRDLRELCGSPLMPRRKQARPRRRSGELVAQDLSRPHPPPSLSPPSGLNLSGASQQRQESQQQSTSSSSATPGGNNNNNNNNNNHHSSNNNNNNHQSQQREDIAENLSLKRSHSPASPSDHQSRIKMERDPTSSPRCSPLTGTSLHPDGSLQDLPAGGLSAMSALSLTPPHHHSEYLTSLGQLAAQWLPNHPSQLQASQAAHHAREGSPQQHGRSQHNPYQQQQQQRESQQCREQQEQHRQQQEQESSLPPIRSVAVFPMDGMSPVGGAGSLFPHGGGLDRGTLLADLHDSFKPETLHGLFGGASLGHHPGKKLKKHRSESGGARRWADHGRGGMPIGRPKGQHSAPRGGPPRSWTNAELTIALQHVWNKQMTTSQASRMFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATTGEVMNSLNNNVKAIQGPPPMSHPLAGLPHPGDEGNFPHHPLLGGNLPQGFFPDYSAAFPVPVSMVHLLPPSEQKALESSTNPGGGSNAPGSCPPGSGSSVIGCPTGSPPGSDMAHGSRTPSPSDNIHNHETSSSSMPPQAPQSAPALLQQNGSD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00397195;
- 90% Identity
- iTF_00721171;
- 80% Identity
- iTF_01364782;