Eisc016425.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Exephanes ischioxanthus
Gene Symbol
lov
Assembly
GCA_958510785.1
Location
OY294023.1:7179139-7182005[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.7e-16 5.1e-13 48.8 0.0 1 44 542 585 542 586 0.95

Sequence Information

Coding Sequence
atgtcgagcgCCGCGGAAAGTCCCGACGCTACAATGGCACTTCAGTCGCATTACTCGCTGCGATGGAACAACCATCAGGCCCACATACTGCAGGCCTTCGAGGCTCTCCTGCACGCCGAAATTCTCGTCGACGTCACACTCGTCTGCTCCGAAACGAGCCTCAGGGCGCACAAGGTCGTCCTAAGTGCCTGCAGTCCGTTCTTCGAGAGGATATTCGCCGAGCACCCCTGCAAGCATCCGGTGATAGTGCTGAAAGACTTTCCGGGTCGTGAGGTAGCGGCGCTGATAGACTTCATGTACCGCGGCGAGGTGCGAGTCGGGAGGGAAGAATTGCCGGGTCTGATGAGGGCAGCGGAGAGTCTGCAGGTACGTGGATTAGCGTCATCGGAGCCGAGACCGGCGAGTCCGCCGGAAACACCGACGACGGATTTGCTCGGTGAGCCATCGACCCCCGAGGGCGCGAGACAGGGAAGTCCCCCGGTGGAGGAGGACAATCTCGAGACAACGGCGACGAGGATAGACTCGCGGGGCGGCATAGTTCAGAGGGAGCACCGTTTGCCGCACATGGGACACCTTAATTTCTCGGTGCGGGATCTTAGGGAGCTGTGCGGTTCGCCGCTGATGCCGAGGAGAAAGCAGGCCCGACCGAGAAGAAGATCCGGCGAGCTTGTCGCGCAAGATCTGAGCAGACCTCACCCACCGCCGAGTCTCAGTCCGCCGAGCGGTTTGAATCTCTCGGGCGCGAGTCAGCAGAGGCAGGAGTCCCAACAGCAGAGCACCTCCTCGGGCGCCACGCCTGGCggtaacaacaacaacaacaacaacaaccacagcagcaacaacaacaaccatCAGAGTCAGCAGCGCGAGGACATAGCGGAGAATCTCTCCCTGAAGAGGTCCCACTCACCCGCTTCGCCCTCCGACCATCAGAGTCGCATAAAGATGGAGCGGGACCCGACGTGCAGTCCCCGATGTTCGCCGCTGACCGGCACGAGTCTCCATCCTGACGGCAGTCTCCAGGATCTCCCGGCGGGCGGTCTCTCGGCGATGTCGGCCCTGTCGCTGACACCGCCGCACCATCACAGCGAGTACCTGACGAGCCTCGGCCAGCTGGCGGCTCAGTGGCTCCCGAATCATCCGAGCCAGTTGCAAGCGAGCCAGGCGGCGCACCACGCGAGGGAGGGCAGCCCTCAGCAGCACGGTCGCGGCCAGCACAATCCTTACCAGCAGCAGAGGGAGTCCCAACAGTGTCGcgagcagcaggagcagcacAGACAACAGCAGGAGCAAGAGTCCTCGTTGCCACCCATAAGATCGGTGGCAGTATTCCCGATGGACGGTATGTCGCCGGTCGGCGGTGCTGGCAGTTTGTTTCCCCACGGCGGAGGTCTCGATCGGGGAACCCTCCTCGCCGATCTTCACGACAGCTTCAAGCCCGAGACGCTTCACGGCCTCTTCGGCGGCGCGAGCCTCGGTCATCATCCGGGAAAGAAGCTGAAGAAACACCGGAGCGAGAGCGGCGGCGCCCGAAGATGGGCCGATCACGGTCGGGGCGGAATGCCCATCGGGAGACCGAAGGGCCAGCACAGCGCGCCGCGCGGCGGACCGCCCAGGTCCTGGACAAACGCCGAGCTCACGATAGCCCTTCAGCACGTCTGGAACAAGCAGATGACGACGTCACAGGCCAGCCGAATGTTCGGCATACCGTACAACAGCCTGCTGATGTACGTTCGTGGCAAGTACGGCAAGAGCCTCAAGCTCGAGCAACTGAGGAGGGACTGCACCGGCGCGACGACCGGCGAAGTCATGAACTCCCTGAACAACAACGTCAAGGCCATTCAGGGACCACCGCCGATGAGTCATCCCCTCGCCGGACTGCCCCATCCGGGCGACGAGGGCAACTTTCCTCATCATCCGCTGCTCGGCGGAAATTTGCCGCAGGGTTTCTTCCCGGACTACAGCGCCGCGTTTCCGGTGCCGGTGAGTATGGTCCATCTGCTGCCGCCGAGCGAGCAGAAAGCCCTCGAGTCCTCGACGAATCCCGGTGGCGGCAGCAACGCCCCCGGCGGTTGTCCGCCCGGCGGCGGGAGCGGCGTCATCGGCTGTCCGACCGGCAGCCCACCGGGCAGCGACATGGCCCACGGAAGTCGCACGCCCTCGCCATCGGACAACATCCACAATCACGagacctcgtcgtcgtcgatgacACCACAGGCGCCCCAATCGGCACCCGCGTTGCTGCAGCAGAACGGCTCCGATTGa
Protein Sequence
MSSAAESPDATMALQSHYSLRWNNHQAHILQAFEALLHAEILVDVTLVCSETSLRAHKVVLSACSPFFERIFAEHPCKHPVIVLKDFPGREVAALIDFMYRGEVRVGREELPGLMRAAESLQVRGLASSEPRPASPPETPTTDLLGEPSTPEGARQGSPPVEEDNLETTATRIDSRGGIVQREHRLPHMGHLNFSVRDLRELCGSPLMPRRKQARPRRRSGELVAQDLSRPHPPPSLSPPSGLNLSGASQQRQESQQQSTSSGATPGGNNNNNNNNHSSNNNNHQSQQREDIAENLSLKRSHSPASPSDHQSRIKMERDPTCSPRCSPLTGTSLHPDGSLQDLPAGGLSAMSALSLTPPHHHSEYLTSLGQLAAQWLPNHPSQLQASQAAHHAREGSPQQHGRGQHNPYQQQRESQQCREQQEQHRQQQEQESSLPPIRSVAVFPMDGMSPVGGAGSLFPHGGGLDRGTLLADLHDSFKPETLHGLFGGASLGHHPGKKLKKHRSESGGARRWADHGRGGMPIGRPKGQHSAPRGGPPRSWTNAELTIALQHVWNKQMTTSQASRMFGIPYNSLLMYVRGKYGKSLKLEQLRRDCTGATTGEVMNSLNNNVKAIQGPPPMSHPLAGLPHPGDEGNFPHHPLLGGNLPQGFFPDYSAAFPVPVSMVHLLPPSEQKALESSTNPGGGSNAPGGCPPGGGSGVIGCPTGSPPGSDMAHGSRTPSPSDNIHNHETSSSSMTPQAPQSAPALLQQNGSD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00397195;
90% Identity
iTF_00721384; iTF_00397195; iTF_00397447; iTF_00840973; iTF_00841220; iTF_01364782; iTF_01364555; iTF_00058835; iTF_00058606; iTF_00059575; iTF_00059371; iTF_00058072; iTF_00057846; iTF_00905532; iTF_00905339; iTF_00397983; iTF_00398223;
80% Identity
iTF_00721384;