Basic Information

Insect: Stegana nigrithorax
Gene Symbol: Hr39
Assembly: GCA_037044495.1
Location: JBAMBQ010004911.1:40735-43922[+]

Transcription Factor Domain

TF Family: SF-like
Domain: zf-C4|SF-like
PFAM: AnimalTFDB
TF Group: Zinc-Coordinating Group
Description: The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.3 1.9e+03 -2.0 1.5 108 157 21 69 3 89 0.62

2 5 0.46 2.9e+03 -2.6 3.0 89 154 198 261 151 298 0.50

3 5 3 1.9e+04 -13.0 18.4 58 165 316 437 225 452 0.56

4 5 9.5e-18 6.1e-14 52.3 4.5 1 133 541 691 541 703 0.65

5 5 2.4e-82 1.5e-78 265.1 0.2 183 408 698 914 693 914 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.3	1.9e+03	-2.0	1.5	108	157	21	69	3	89	0.62
2	5	0.46	2.9e+03	-2.6	3.0	89	154	198	261	151	298	0.50
3	5	3	1.9e+04	-13.0	18.4	58	165	316	437	225	452	0.56
4	5	9.5e-18	6.1e-14	52.3	4.5	1	133	541	691	541	703	0.65
5	5	2.4e-82	1.5e-78	265.1	0.2	183	408	698	914	693	914	0.95

Sequence Information

Coding Sequence: atgtcaacaatcAAAGCCGAAGCGAATGCAATGAGCAGCACAACAACTGGCGGCGGCAGTGCTGGCTATCAGCTGCCAGTGAAcatgagcagcagccaaactGGGTCCAATACGAGCAACCATACAACAGCAGGCACCGCAGTAGGCACGGCAAccatgacgacgacgaccagCAGCACAACACGGCACAATGTTTCCGTGACGAAtattaaatgtgaaattgACGATTTGGCCTCAACGCCCAATGGCAACATTGTCCCGGTGATTGCGAGCACGGCCAACTACAATGGCGGTGGCGCCATCGGCGGCATACGCATACCGCTGAGCAACAACACGGAGTCACCGCCGAATAGCAATACAAAAGCCGAAGATTCCGACTCGGAGGCTGAATTGACAAACATCGAGAATCTAAAGGTGACCAGGCGTATTGCAAATAGCGGCGGCAATGCCACGGGgtccgctgccgctgccgatgTGCACAACAAGAATGGACCACGACCCATGTCTTGGGAGGGTGAATTGTCGGAAACGGAAACGAATGAAACCGAACTCATGGAGACGGAGAATTCACTAAGTAATGGCATTGGCATGTGCATGGCCGTGGCGGTGATAAAGAgtgaggcaacaacaacgacaacgtccATGGGTAGCCAACAACAGATGCAGCCAATTAAAACCGAACTCGAACAGATCTCGGCAAGTTTGTATGCACCGGCAGCGTCACATGCCGGCAAACTGAAACTTGCGCCAACGCAAAGTGATCCCATCAATCTCAAATATGAGCCCACCAGCCACACAAACGACCTGGGCACAACGAACACAGCGACCAGCACGATCAATTCGTCGACGACCAATCTGGCTGGTGGCATTAACTCGCCACTGCTTGCGACgcgcaacaaaggcaacaatctGCCATTGCCCGCCAATCCTAGTCCCGATTCCGCCATACATTCCGTCTACACGCACAGTTCGCCATCTCAGTCGCCGCTGACATCGCGTCATGCGCCCTACACGCCCTCGCTGAGTCGCAACAACAGCGATGCATCGCACAGCTCCTGCTACTCCTACAGTTCCGAGTTCAGTCCCACACACTCGCCCATACAGGCGCGCCATGCGCCGCCGGCGGGCGCACTCTATGCCGGCCCCTTCAATGGCGGCACCCTGCATCATCACGGTGTGCTCTATCGCCCCCTGAATGTGGATGCCGGCAATGCCACGGCAGCGGCCGCCGTTGCACAGGAGGCACAAAACCTCAGCATGGACACAACGCAGCCAACGAGCACGACAACGTCGACGACGTCGGCCGCAAATGCCGCCAATGCGAATGCGATCCCATATGAGAGTGCTGCCGCACCGTCGGGTTTGCCGGCCTCGCCGGCGGGCATTTCGCGACAGCAGCTGATCAACTCACCGTGTCCCATTTGTGGCGATAAAATCTCAGGCTTTCATTATGGCATCTTCTCGTGCGAGTCGTGCAAGGGATTCTTCAAGCGGACCGTGCAGAATCGCAAGAACTACGTCTGCGTGCGTGGTGGTCCGTGCCAGGTGAGCATCTCGACGCGTAAGAAGTGCCCGGCGTGTCGTTTTGAGAAGTGCCTGCAGAAGGGCATGAAACTGGAGGCCATACGTGAGGATCGCACACGCGGCGGCCGTTCGACTTATCAATGCTCATATACATTACCCAATTCGATGCTGAGTCCGCTGCTTAGTCCGGAGCAGCAAGGTGCGGCAGtggcggctgcagcagcagcggccgcagcagcaaatgttgctagtcaacaacaacagcaacagcaacaacatcatcaccagcagcaacaacagcagccacatcgTCTACACACGCTCAACGGTTATGCGCACTCACCCGTCGGGGTGGCCGCGCAGACCATCAAAGCGGAACAATCCGATGCAGCCTATAACGGTGCCACTGCATCGCCCGGCTTGCTGATCACTGGATCCGGTGCAATCATACCCGACTTACTGCAGGAAATCATGGATGTCGAGCATCTGTGGCAGTATAATGAAGCCGAGTTGGCACGTCTGAATCAACCACAGGTAGCTGGCGCAGCGAATAGTGGATCGAGCGCCAATCCACAGATGACCAACCCACTGCTGGCCAGTGCGGGTCTGGGTTCGAATGGCGAAAATGCGAATCCGGATTTGATTGCGCATCTGTGTAATGTGGCCGATCATCGGCTCTACAAGATCGTCAAGTGGTGCAAGAGCCTGCCACTATTCAAGCATATATCGatcGATGATCAAATCTGCCTGCTTATCAATTCCTGGTGTGAACTGTTGCTCTTCTCCTGCTGTTTTCGCTCGGTTGATACACCCGGCGAAATCAAAATGTCACAAGGCAAGAAGATCACGCTCGTACAAGCTAAAACTCATGGACTTCAGACCTGCATTGAACGTATGCTGAATCTGACAGATCATTTGAGACGTCTACGCGTCGATCGTTATGAATATGTTGCCATGAAAGTGATTGTCCTATTGCAATCGGACACCACCGAACTGCAGGAGCCGGTGAAAGTACGCGAATGCCAGGAGAAGGCATTACAAAGTCTGCAGGCCTATACGCATGCGCATTATCCCGATACGCCGTCCAAGTTTGGTGAACTGTTGCTACGCATACCCGATCTGCAGCGCACATGTCAAttggGCAAAGAGATGCTGACCATTAAATCACGCGATGGCGGCGATTTCAATTTGCTTATGGAACTGCTGCGCGGAGAGCATTGA
Protein Sequence: MSTIKAEANAMSSTTTGGGSAGYQLPVNMSSSQTGSNTSNHTTAGTAVGTATMTTTTSSTTRHNVSVTNIKCEIDDLASTPNGNIVPVIASTANYNGGGAIGGIRIPLSNNTESPPNSNTKAEDSDSEAELTNIENLKVTRRIANSGGNATGSAAAADVHNKNGPRPMSWEGELSETETNETELMETENSLSNGIGMCMAVAVIKSEATTTTTSMGSQQQMQPIKTELEQISASLYAPAASHAGKLKLAPTQSDPINLKYEPTSHTNDLGTTNTATSTINSSTTNLAGGINSPLLATRNKGNNLPLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPAGALYAGPFNGGTLHHHGVLYRPLNVDAGNATAAAAVAQEAQNLSMDTTQPTSTTTSTTSAANAANANAIPYESAAAPSGLPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPEQQGAAVAAAAAAAAAANVASQQQQQQQQHHHQQQQQQPHRLHTLNGYAHSPVGVAAQTIKAEQSDAAYNGATASPGLLITGSGAIIPDLLQEIMDVEHLWQYNEAELARLNQPQVAGAANSGSSANPQMTNPLLASAGLGSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKHISIDDQICLLINSWCELLLFSCCFRSVDTPGEIKMSQGKKITLVQAKTHGLQTCIERMLNLTDHLRRLRVDRYEYVAMKVIVLLQSDTTELQEPVKVRECQEKALQSLQAYTHAHYPDTPSKFGELLLRIPDLQRTCQLGKEMLTIKSRDGGDFNLLMELLRGEH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01363991;
90% Identity: iTF_01363991;
80% Identity: iTF_01363991;