Snig005737.1
Basic Information
- Insect
- Stegana nigrithorax
- Gene Symbol
- dl
- Assembly
- GCA_037044495.1
- Location
- JBAMBQ010002366.1:70358-72037[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 0.62 1.7e+03 -1.1 0.2 51 74 6 29 2 34 0.80 2 3 2e-72 5.6e-69 231.5 0.1 1 169 36 206 36 206 0.99 3 3 0.54 1.5e+03 -0.9 4.0 44 115 362 466 338 488 0.62
Sequence Information
- Coding Sequence
- atggaGCCACAACAAAATGTGCATACTAATTGTccgcaggagcagcaacaacaacaacaacacacgcaTTTCTTGTTGCTGAAGAACATAGCACAGAAACCTTTTGTGAAAGTCACCGAGCAACCCGCCAGCAAAGCTCTGCGCTTTCGCTACGAATGCGAGGGCCGCACAGCGGGTTCCATACCGGGCGTCAATTCGACGTCGGAGCATAAAACCTATCCGAGCATTGAGATTGTTGGCTTTAAGGGCCGTGCTCTGGTGGTTGTGTCCTGCGTGACCAAGGATGCGCCTTATCGGCCCCATCCGCATCACATTGTCGGCAAGGAGGGCTGCAAGAAGGGCGTTTGCACGCTGGAGATAAACAGCGACACGATGCGTGCGGTGTTTAGTAATCTGGGCATACAATGTGTCAAGAAGAAGGACATTGATTCGGCGCTAAGGGAACGCGAAGAGATACGCGTCGATCCATTCAAAACTGGCTTCGCCCACGGTTGTCAGCCTTCGAGCATCGATTTGAATGTGGTGCGTTTATGCTTTCAAGTTTTCATGGAGAGTGAGCAGAAGGGACGCTttacgctgccgctgccgcccgTCGTCTCCGAGCCTATATACGACAAGAAGGCAATGTCTGATTTGGTGATCACTCGTTTGTGCAGCTGCTCGGCCACCGTGTTGGGCAATACACAGGTCATACTGCTTTGCGAGAAAGTCAGCAAAGAGGACATCTCTGTACGCTTGTTTGAGGAGAAGCAGGGACGCACTATTTGGGAGGCCCTGGGTGAGTTTCAGCATGTGGATGTGCATAAGCAGACCGCCATAACATTTAAGACGCCGCGTTATCACACACTCGACATAACGGCACCGGTGAAGGTCTGCTTACAGCTGCGTCGGCCGTCGGATGGTGTGACCAGTGAGTCACTGCCCTTCCTGTATAAGCCACTCGATTCGGATGTGGAAAATTTGCGGCGAAAGCGTCAGAAGATTGCCAGCGATCCGCTACAATTGTGGTtattaaagcagcagcaaaatcaacagcaacaacaaaagatggAAACTACGCAAATGATATCGAAAAATCAGCCACAGGCATATGTAGGCGAAGCTGGTGTTGCGGCAACATTGCAGCAGCCTAGCTATAATATTTTGGTGCAGCACGACTTGACACAACGACAGTGCGACACACAGGCATTGCAGAAACACcaacgccaacagcagcaacaacaatatacagCAAATATTGTTGTGGATAGAAACAACGACATGAATAATCTGAATATGCCACACAAGATGCCacattttttggcaacacCTATGGCAGATGTTATGGGAAACGTGAATGGGTCTGGTGACCTTGCAGGAAACTTAGCGCCTGTGCATTGGCATCAACATGCTGTGCagttccaacaacaacaacaacaacagcaaaagcaaacacatcaacaacaacttcagcaAGCTAATGGTGccacaccacaacaacaatatgcggCCAATGCTTCCTCCGGCGGAACAGGCCCGGAAATGCTTATTccaatcagcaacaacaacaacggcccAACAATCAGCAATCTATTGAGCTTTGATAGCGAGCAATTGGTGCGCATTGACACCGAGGATCAGCAATTGTTGAACCTGAACACTGAAGATCTGCAAATATCAGATTTATCCATATCCGcttaa
- Protein Sequence
- MEPQQNVHTNCPQEQQQQQQHTHFLLLKNIAQKPFVKVTEQPASKALRFRYECEGRTAGSIPGVNSTSEHKTYPSIEIVGFKGRALVVVSCVTKDAPYRPHPHHIVGKEGCKKGVCTLEINSDTMRAVFSNLGIQCVKKKDIDSALREREEIRVDPFKTGFAHGCQPSSIDLNVVRLCFQVFMESEQKGRFTLPLPPVVSEPIYDKKAMSDLVITRLCSCSATVLGNTQVILLCEKVSKEDISVRLFEEKQGRTIWEALGEFQHVDVHKQTAITFKTPRYHTLDITAPVKVCLQLRRPSDGVTSESLPFLYKPLDSDVENLRRKRQKIASDPLQLWLLKQQQNQQQQQKMETTQMISKNQPQAYVGEAGVAATLQQPSYNILVQHDLTQRQCDTQALQKHQRQQQQQQYTANIVVDRNNDMNNLNMPHKMPHFLATPMADVMGNVNGSGDLAGNLAPVHWHQHAVQFQQQQQQQQKQTHQQQLQQANGATPQQQYAANASSGGTGPEMLIPISNNNNGPTISNLLSFDSEQLVRIDTEDQQLLNLNTEDLQISDLSISA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -