Basic Information

Insect: Spodoptera litura
Gene Symbol: stc
Assembly: GCA_002706865.1
Location: NC:11645578-11658356[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 1.6e+04 -4.4 1.6 15 19 599 603 598 603 0.81

2 13 0.13 1e+03 -0.3 0.6 4 10 633 639 632 639 0.93

3 13 4.1e-05 0.32 10.9 18.1 4 19 647 662 645 662 0.93

4 13 2.4e-08 0.00019 21.2 14.1 1 19 698 716 698 716 0.97

5 13 2.6e-05 0.21 11.5 13.0 1 18 757 774 757 775 0.98

6 13 5.6e-05 0.45 10.4 12.6 1 19 816 838 816 838 0.87

7 13 2 1.6e+04 -5.4 2.2 6 10 868 872 868 872 0.94

8 13 0.0036 29 4.6 7.4 1 11 878 888 878 889 0.95

9 13 0.047 3.7e+02 1.1 0.3 4 10 893 899 892 900 0.93

10 13 1.2e-05 0.093 12.6 13.9 3 19 907 923 905 923 0.92

11 13 0.00043 3.4 7.6 9.6 10 18 970 978 967 979 0.92

12 13 4.1e-08 0.00033 20.4 14.0 1 17 1015 1033 1015 1039 0.83

13 13 0.0094 75 3.3 12.3 1 16 1045 1064 1045 1070 0.74

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	1.6e+04	-4.4	1.6	15	19	599	603	598	603	0.81
2	13	0.13	1e+03	-0.3	0.6	4	10	633	639	632	639	0.93
3	13	4.1e-05	0.32	10.9	18.1	4	19	647	662	645	662	0.93
4	13	2.4e-08	0.00019	21.2	14.1	1	19	698	716	698	716	0.97
5	13	2.6e-05	0.21	11.5	13.0	1	18	757	774	757	775	0.98
6	13	5.6e-05	0.45	10.4	12.6	1	19	816	838	816	838	0.87
7	13	2	1.6e+04	-5.4	2.2	6	10	868	872	868	872	0.94
8	13	0.0036	29	4.6	7.4	1	11	878	888	878	889	0.95
9	13	0.047	3.7e+02	1.1	0.3	4	10	893	899	892	900	0.93
10	13	1.2e-05	0.093	12.6	13.9	3	19	907	923	905	923	0.92
11	13	0.00043	3.4	7.6	9.6	10	18	970	978	967	979	0.92
12	13	4.1e-08	0.00033	20.4	14.0	1	17	1015	1033	1015	1039	0.83
13	13	0.0094	75	3.3	12.3	1	16	1045	1064	1045	1070	0.74

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAATACTTACGCTTACAACAACCAATACCAGGCCTGGAATGGTGATCCCAATGTCCAATATGTGAACCAAGGCTACTACCCAAACAGAGCGGACCAACCTAATCAATATGTGAGCTTTAATGAATTTCTTTCTCAAATGCAAAACAATGCAGCGCCCAGTACTAGCAACTATAGCAATGTTCAATATGAAAACTACCCTCCAGGGCAGTACAATTACCAGAACATACCTACTACTGCCCCCCAGAATCCTCAGTTAGAAAATTATGGTTATGCAGCTCAAACCTCTAATGTCCCCAGTGGCTCAGAATCTTACCCCATGAATATGCAAAGCCAATATGCTCCAGCGGCAAACAATCCTAATGTGTATACTAATGCTATGATATTGAAATCTAATCTCACTCCAACAGCCACTGAGTTTGTGCCAAAAAGTTCTATGATGAAACCTTCAGTTAGCAGTCAGAACATTCCTGAATCTAGTACTGTACGTGATGATAATGAATCTAGAAATAATTATAGCAATGTAAATGAAACTAGGAATCAATTCAATAACTCTAATGGGTCTAGAAATACTTACCCCAGTACAAGTGAACCCCGAAGTGTTGGTGGTAGTTCATCAGACACAAACTGGAGAGAAAGGCCACAGAGTACACAGCAGGTTAATGAACCAAGCCACAAAACTGAATCTTACCAACGCACTCAAGAACCCTCAAGAAATCAAGAATCCACTAGCCGTCATCGAGATAATAACTATCGCAACAATGAATCTAATGCAAGGCACCATGATACTAGCAGTCGTAATCAAGAAGGTAACAGCCGTAGCCATGAAGCTAACAGTCGGAACCAAGAAGGTAACGGTCGAAACCAAGAAGGTAACGGCCGCAATCATGAGGTAGAATCCAGGCAATATGAATCTAGTAACCGGCAGCAGGATTCCAATAGCCGGACCTATGAGGCCACCAACCGCAACTATGAGAATACAAGCAACAAAAGAGgccaaacaaaatcaaattataaatcAAAGTCTAAAGATGATGCCCGCACATTCTACAACAGTTCTATTAGTAAAGACAGCCAAGATGTGAGGAATGGAAGAGGGGAATCTTCTGGGCGGGGTAAGAATTGGGTGGGCACTCCTCGTCTACGGGCCATGGAACGCAACAGCACAGAAGATGAGCAATATGCCAATACATACTTACAAGGCAGGGAGGATAGAGTGGAAAGAGACAACAGAGATAGGGATCATTCAAATAGAGAACGAGATGTTCGAGAACCGAATAGAGATGTACGAGATAAAGATAGAGGAGATGTGCGAGTAAGGGATAGAGATAGAGAACGCAATGTACGCGAAAGGGACAGAGATAGGGGGGAGCGTGATGTAGCAGATAAAGATAAGGAACGGGATATTCGCGATCGTGATAGAGAACACAGAGAGCTGGAGAGAGAACATAGACACAGGGAAAGAGAGAACAGAGAAAAAGAGAGAGAACATAGAGAAAAAGAAAGAGATAACAGAGAGAGGGAAAGAGCTATAAAATCTGAACATATTCCCAGTCCTGCTCGGTCTAAGGCACGATTTTTTTATGACCAAGCTAATAAGGAGATGACCCAACGTGAGCGCCTCACTGAACAGTTGGATAAAGGAACGTTGGAATGTCTAGTCTGCTGTGAACGAGTGAAACAATATGATCCGGTCTGGTCGTGCAGCAACTGTTACCATGTCCTACATCTTAGGTGCATTCGGAAATGGGCTATGAGCAGCATGGTTGAGAGTAAATGGCGCTGCCCAGCGTGCCAGAACACAAACGAGACTATACCGACAGACTACCGATGTATGTGCGGCGCGGTCCGTACTCCCGAGTTCCAGCGCGGCGCCGTGGTCGCCCACACGTGCGGGCGCTCCTGTCGCCGCCCGCGCTCCTGCCCCCACCCCTGCACCTTGCTCTGTCATCCGGGACCATGTCCACCTTGCCAGGCTACTGTTATGAAGTCTTGTGGTTGTGGAGCGGAGAATCGCTCAGTGCTATGCAGCAGTAAGTTGCCACAAGTGTGTGGTCGCGTCTGTGGACGAACTTTGGAGTGCGGCGTGCATAAGTGTACCCAGAGCTGTCATGATGGACCTTGCGAAACTTGTACTGAGATGGTTGAACAAGTATGCTACTGTCCGGCTGCGAAGGCCCGCTCCGTGGCGTGCACGGCGGAGTGCGGCGGCGCCGTGCTGTGGTCGTGCGGGGAGGCGTGCGGGCGGGTGCTGGCGTGCGGGGCGCACGTGTGTCGCGCGCCGTGCCACGCCCCGCCCTGCCAGCCCTGCGCGCTACTGCCGCAGTATGTCACCACCTGCCCCTGCGGGAATACCAAGTTAGCTAAAGATTCTCGCAAGAGCTGCACGGAACCGATCCCGCTGTGTGGCAACATTTGTGCGAAACCACTATCGTGTGGCCCGGCTGGGGACAAACACTTCTGCAAGATCAATTGCCATGAAGGTCCGTGTCCCGAGTGCCCGGACAAGACAGTGTTACAGTGTCGCTGCGGACACTCCAGTCGCGAGGTGCCGTGTGTGGACCTGCCACAGATGTACAACAATGTGTTCTGCCAGAAGAAATGCAATAAGAAATTGTCGTGTGGCCGACACCGCTGCCGCACGGTATGTTGCGCGGCGACGTCGCACCGCTGCGCCGTCGTCTGCGGCCGCACGCTGGCCTGCCAGGCGCATCGCTGCGAGGACTTCTGTCACACTGGTCACTGCGCGCCCTGCCCTAGACTCATATTCGAGGAGCTGTCGTGCGCGTGCGGCGCGGAGGTGTTGTTCCCGCCGGTGCGGTGCGGCACGCGCGCGCCGGCCTGCGCCGCGCCGTGCGGCCGGCCGCGCGGCTGCCCGCACCCGCCGCACCACTCCTGCCACTCGGGGGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGGTGCCACGGGAACCACGAGGAACGAAAAACAATACCGTGTTCCCAAGAAGAGTTCTCGTGCGGTCTACCCTGTGGAAAGCCCCTTCCTTGCGGCAAACACACTTGTATAAAGACTTGCCATAAAGGACCCTGTGATACTGGCAAATGCACCCAGCCGTGCACGGAGAAGCGTCCGTCGTGCGGCCACCCGTGCGCGGCGCCGTGCCACGCGGGCGGGGGCGACCCCACGCCGTGTCCCAGCGCCGCGCCCTGCCGCCGCCTCGTGCGCGCCACCTGTCCCTGCTCGCGGCGGCACGCCGAGCGGACCTGCGCCGACAACGCCCGGGATTATGCCAAGATGATGAGCGCTCTAGCGGCTACCAAGATGGCCGAGGGAGGTACAGTTGACGTATCCGAAGTGCAGCGCCCTAGCAATATGCTCAAAACtttggAGTGCGACGACGAGTGCCGCGTAGAGGCGCGCACGCGTCAGTTGGCGCTGGCCCTTCAGATCCGCAACCCCGACGTGTCGGCCAAGCTGGCGCCGCGCTACAGCGACCACGTCCGCACCACCGCCGCTAGAGAACCTGCCTTCGCTAACCAAGTGCATGACAAACTTACCGAGCTCGTGCAATTAGCTAAAAAGtcaAAACAAAAGACTCGTGCGCACTCGTTCCCGTCAATGAACAGACAGAAGCGTCAGTTTATACACGAGATGTGCGAGCACTTCGGTTGTGAGAGCGTGGCCTACGATGCTGAACCCAACAGGAACGTCGTGGCCACCGCTGATAAAGAAAAGTCATGGCTACCAGCAATGAGCGTGATGGAGGTGCTAGCCCGCGAGGCAGGCAAGCGTCGTGTCCCGGGCCCCGTACTCCGCGCCCCGCCCGCCGCACTGGGCTCCTCGGGGCCCACCGCCGGCCCTTCACAGACGACTAACTCTGCTCCCAATAAATCATCTAGCGGCTGGGCGACTTTAACTTCAACAAACGCTTGGGCTGCTCGCAGCCAGCCGAAGCAGCCAAGCCAGCCACAACCGCCGGCCGAAAAAATCGACTACTTCGACAACCCGCCCGACAACTAG
Protein Sequence: MSQWNNTYAYNNQYQAWNGDPNVQYVNQGYYPNRADQPNQYVSFNEFLSQMQNNAAPSTSNYSNVQYENYPPGQYNYQNIPTTAPQNPQLENYGYAAQTSNVPSGSESYPMNMQSQYAPAANNPNVYTNAMILKSNLTPTATEFVPKSSMMKPSVSSQNIPESSTVRDDNESRNNYSNVNETRNQFNNSNGSRNTYPSTSEPRSVGGSSSDTNWRERPQSTQQVNEPSHKTESYQRTQEPSRNQESTSRHRDNNYRNNESNARHHDTSSRNQEGNSRSHEANSRNQEGNGRNQEGNGRNHEVESRQYESSNRQQDSNSRTYEATNRNYENTSNKRGQTKSNYKSKSKDDARTFYNSSISKDSQDVRNGRGESSGRGKNWVGTPRLRAMERNSTEDEQYANTYLQGREDRVERDNRDRDHSNRERDVREPNRDVRDKDRGDVRVRDRDRERNVRERDRDRGERDVADKDKERDIRDRDREHRELEREHRHRERENREKEREHREKERDNRERERAIKSEHIPSPARSKARFFYDQANKEMTQRERLTEQLDKGTLECLVCCERVKQYDPVWSCSNCYHVLHLRCIRKWAMSSMVESKWRCPACQNTNETIPTDYRCMCGAVRTPEFQRGAVVAHTCGRSCRRPRSCPHPCTLLCHPGPCPPCQATVMKSCGCGAENRSVLCSSKLPQVCGRVCGRTLECGVHKCTQSCHDGPCETCTEMVEQVCYCPAAKARSVACTAECGGAVLWSCGEACGRVLACGAHVCRAPCHAPPCQPCALLPQYVTTCPCGNTKLAKDSRKSCTEPIPLCGNICAKPLSCGPAGDKHFCKINCHEGPCPECPDKTVLQCRCGHSSREVPCVDLPQMYNNVFCQKKCNKKLSCGRHRCRTVCCAATSHRCAVVCGRTLACQAHRCEDFCHTGHCAPCPRLIFEELSCACGAEVLFPPVRCGTRAPACAAPCGRPRGCPHPPHHSCHSGDCPPCVVLTTKRCHGNHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCTEKRPSCGHPCAAPCHAGGGDPTPCPSAAPCRRLVRATCPCSRRHAERTCADNARDYAKMMSALAATKMAEGGTVDVSEVQRPSNMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSDHVRTTAAREPAFANQVHDKLTELVQLAKKSKQKTRAHSFPSMNRQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVMEVLAREAGKRRVPGPVLRAPPAALGSSGPTAGPSQTTNSAPNKSSSGWATLTSTNAWAARSQPKQPSQPQPPAEKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01362200;
90% Identity: -
80% Identity: -