Basic Information

Insect: Spodoptera exigua
Gene Symbol: stc
Assembly: GCA_011316535.1
Location: CM022063.1:3210317-3240079[-]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 2 2.3e+04 -4.4 1.6 15 19 575 579 574 579 0.81

2 13 0.058 6.6e+02 0.8 1.5 2 10 607 615 607 615 0.92

3 13 4.1e-05 0.47 10.9 18.1 4 19 623 638 621 638 0.93

4 13 2.9e-08 0.00033 21.0 14.7 1 19 674 692 674 692 0.97

5 13 0.00011 1.3 9.5 12.6 1 19 733 751 733 751 0.98

6 13 2.7e-05 0.31 11.4 12.6 1 19 792 814 792 814 0.87

7 13 2 2.3e+04 -5.4 2.2 6 10 844 848 844 848 0.94

8 13 0.0036 42 4.6 7.4 1 11 854 864 854 865 0.95

9 13 0.047 5.4e+02 1.1 0.3 4 10 869 875 868 876 0.93

10 13 7.5e-06 0.086 13.2 13.5 3 19 883 899 881 899 0.92

11 13 0.0043 50 4.4 12.2 9 18 945 954 938 955 0.91

12 13 4.7e-08 0.00053 20.3 14.0 1 17 991 1009 991 1015 0.85

13 13 0.00017 2 8.9 5.5 1 13 1021 1032 1021 1033 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	2	2.3e+04	-4.4	1.6	15	19	575	579	574	579	0.81
2	13	0.058	6.6e+02	0.8	1.5	2	10	607	615	607	615	0.92
3	13	4.1e-05	0.47	10.9	18.1	4	19	623	638	621	638	0.93
4	13	2.9e-08	0.00033	21.0	14.7	1	19	674	692	674	692	0.97
5	13	0.00011	1.3	9.5	12.6	1	19	733	751	733	751	0.98
6	13	2.7e-05	0.31	11.4	12.6	1	19	792	814	792	814	0.87
7	13	2	2.3e+04	-5.4	2.2	6	10	844	848	844	848	0.94
8	13	0.0036	42	4.6	7.4	1	11	854	864	854	865	0.95
9	13	0.047	5.4e+02	1.1	0.3	4	10	869	875	868	876	0.93
10	13	7.5e-06	0.086	13.2	13.5	3	19	883	899	881	899	0.92
11	13	0.0043	50	4.4	12.2	9	18	945	954	938	955	0.91
12	13	4.7e-08	0.00053	20.3	14.0	1	17	991	1009	991	1015	0.85
13	13	0.00017	2	8.9	5.5	1	13	1021	1032	1021	1033	0.95

Sequence Information

Coding Sequence: ATGTCTCAGTGGAACAATACTTACGCATACAACAACCAATACCAAGCCTGGAACGGTGATCCCAATGTCCAATATGTGAACCAAGGCTACTACCCCAACAGAGCGGACCAAGCTAATCAGTATGTGAGCTTTAATGAATTTCTTTCTCAAATGCAAAACAATGGAGCACCCAGTACTAGCAACTATAGCAATGTTCAATATGAAAACTACCCTACAGGTCAGTACAATTACCAGAATATACCTACGACTGCCCAGAATCCTCAATTAGAAAATTATGGATATGCAGCACAAGCTTCCAATGTTCCCAGTGGTTCAGAATCCTACTCTATGAACATGCAAAGTCAATATACTCCAGTGGCAAACAATCCTAATATGTATACTAATGCTATGATACTGAAATCCAATCTCACACCAACAGCCACTGAGTTTGTGCCAAAAAGTTCTATGATGAAACCTTCAGTTAGCACTCAGAACATTCCTGAATCTAGTACTGTATGTGATGATAATGAATCTAGAAATAATTATAGTAATGTAAATGAAACTAGGAATCAATACAATAACTCTAACGGGTCTAGGAATAATTACTCCAACACAAGTGAACCTCGCAGTGTTGTTGGTAGTTCATCTAACACAAACTGGAGAGAAAGGCCTCAGAGCTCACAACAGGGTAATGAAACAAGCCACAAAACTGAATCATACCAACGCACACAAGAACCCACAAGAAATCAAGAATTCAATGGCCGTCACCGAGATAATAGCCATCGCAACAATGAATCTAATGCAAGGCAGCATGATTCTAGCAGTCGTAACCAAGATGCCAACAGTCGTAACCATGAGGTAGAATCCAAACAATTTGAATCAAATGGGCGACAGCAGGATTCTAGTAGCCGAACCTATGAAGCCACCAACCGTAACTATGAGAATACAAGCAACAAAAGAGGCCAAGGAAAGTCTAATTATAAAGCAAAATCTAAAGATGACGCCCGCACCTTTTACAACAGTTCTATAAGTAAAGACAGTCAAGATGTGAGGAATGGAAGAGGGGAATCTTCTGGACGGGGAAAGAATTGGGTGGGCACTCCTCGTCTCCGCGCAATGGAACGAAACAGCACAGAAGATGAGCAATATGCCAACACATATTTGCAAGATAGAGCAGATAGAATGGAAAGAGATAACAGGGACAGGGATAGAGATCATCCAATTAGAGAGAAAGATGTGCGAGAATCAAATAGAGATAGAGACAGGGGTGATGTGCGAGAAAGGGATAGAGATAAAGAACGTGATGTGCGTGAAAAGGATAGAGATAGGGAGCGTGATATACGAGACCGAGATAGGGAAAGAGAATTTCGCGATCGTGATAGAGAACACAGAGAGCGGGAAAGAGAACATAGAGAAAGGGAGAGAGAAAATAGAGAAAAGGAGAGAGAACATAGAGAAAGGGAAAGAGATAACAGAGAGAAGGAAAGAGCGTCTAAGTCTGAACATGTTCCCAGTCCTGCTAGGTCTAAGGCACGATTTTACAATGAGCAAGttAGCAAAGAAATGACCCAACGCGAGCGTCTTACGGAACAGCTGGATAAAGGAACGCTGGAATGTCTAGTCTGCTGTGAACGAGTGAAACAATATGATCCAGTTTGGTCGTGTAGCAACTGTTACCACGTCCTGCATCTTAGGTGCATACGAAAATGGGCGATGAGCAGCATGGTCGagGGTAAATGGCGGTGTCCAGCTTGTCAGAACACAAACGAGACTATACCGACGGATTACCGCTGTATGTGTGGGGCTGTGCGGACGCCCGAGTACCAGCGGGGCTCCGTTGGCGCCCACACTTGCGGGCGCTCCTGTCGCCGTCCGAGATCCTGTCCCCACCCCTGCACGCTGCTCTGTCACCCGGGACCCTGTCCACCATGCCAGGCTACTATTATGAAGTCCTGTGGTTGTGGCGCAGAGAACCGCTCAGTTCTATGCAGCAGTAAGTTGCCACAAGTGTGCGGTCGCGTCTGTGGCCGTACCTTGGAGTGTGGCGTGCATAAGTGTACCCAGAGCTGTCATGAAGGGCCTTGCGAAACTTGCACTGAGACAGTGGAACAAGTGTGCTACTGCCCTGCCGCGAAGCGTCGGTCGGTGTCGTGCACGGCGGAGTGCGGGGGCGCGGCGCAGTGGTCGTGCGGCGCGGGCTGCGGCCGCGTGCTGGCGTGCGGCGCGCATGTCTGCCGCGCGCCCTGCCACGCGCCGCCCTGCCTCCCCTGCCAACTGCTGCCCGACTACGTCACCACCTGCCCCTGCGGGAACACCAAGCTGCCTAAGGATTCTCGCAAGAGCTGCACTGACCCAATCCCGTTGTGTGGCAACATCTGTGCGAAACCGTTGTCGTGTGGTCCGGCCGGAGACAAGCACTTCTGCAAGATGAATTGCCATGAAGGTCCGTGCCCTGAGTGCCCGGATAAGACAGTGTTGCAATGTCGCTGTGGGCACTCTAGCCGCGAGGTGCCGTGTGTCGACCTCCCGCAGATGTACAACAATGTCCTCTGCCAGAAGAAGTGCAACAAGAAGTTGTCGTGCGGACGGCACCGCTGCCGCACGGTGTGTTGCGCGGCGACGTCGCACCGCTGCGCCGTCGTCTGCGGCCGCACGCTCGCCTGCCAGCTGCATCGCTGCGAGGACTTCTGCCACACCGGACACTGCGCGCCCTGCCCCAGGTTCAGTTTCTCGGAGTTGTCGTGCTCGTGCGGCGCGGAGGTGTTGTTCCCGCCGGTGCGCTGCGGCACGCGGCCGCCGGCGTGCAGCGCGCCGTGCGGCCGGCCGCGCGCGTGCCGCCACGCCCCGCACCACGCCTGCCACGCCGGGGACTGCCCGCCCTGCGTCGTGCTCACCACCAAGCGCTGCCACGGGAACCACGAGgaaagaaaaacaataccgTGCTCCCAAGAAGAATTCTCATGCGGACTTCCATGCGGGAAACCCCTTCCTTGCGGCAAACACACGTGTATCAAAACCTGCCATAAGGGACCCTGTGATACTGGCAAATGCACCCAGCCATGCATGGAGAAGCGTCCGTCGTGCGGACACCCTTGTGCGGCGCCTTGCCACGTGGGCGCGAGCGGGGGCGCGGGGCCGAGTAGTAGCGGGGGCGCAAGTGGTAGCGGGGGCGCGAGTGGTAGTGGGAGTGGTCAGGCGACGGCGTGCCCTAGCTCTGCGCCCTGCCGCCGCCTCGTGCGCGCCACGTGTCCCTGCTCCCGCAGGCACGCCGAGCGTACCTGCGCTGACAACGCCAGGGACTATGCCAAGATGATGAGCGCTCTGGCTGCCACCAAAATGGCAGAGGGAGGTACAGTGGACGTGTCTGAAGTACAACGCCCCAGCAATATGCTCAAAACCTTGGAATGCGACGACGAGTGCCGCGTAGAAGCGCGGACCCGTCAGTTGGCGCTGGCGCTGCAGATCCGCAACCCCGACGTGTCGGCCAAGCTGGCGCCGCGCTACAGCGAACACGTCCGCGCCACCGCCGCGCGGGAGCCCGCCTTCGCTAACCAAGTCCATGAAAAGCTCACTGAACTCGTGCAACTTGCTAAAAAGTCAAAACAAAAGACTCGTGCACACTCTTTCCCGTCAATGAACCGACAGAAGCGTCAGTTTATCCACGAGATGTGTGAACACTTCGGTTGTGAGAGCGTTGCCTACGATGCTGAACCCAACAGGAATGTTGTAGCCACCGCTGATAAGGAAAAgTCATGGCTACCAGCAATGAGCGTGATGGAGGTGCTAGCTCGCGAGGCAGGCAAGCGTCGTGTCCCGGGCCCCGTACTGCGCGCCCCGCCCGCCGCCTCGACCTCCTCGGGGCCAACCTCCGGAACTGCACAAACCTCTAACTCTGCCTCTAATAAATCATCAAGCGGCTGGGCGACCTTAACTTCAACGAACGCTTGGGCTGCTCGCAGCCAGCCAAAGCAGGCAAGCCAACCACAGCCAGCAGCCGAGAAAATCGACTACTTCGACAACCCGCCCGATAACTAG
Protein Sequence: MSQWNNTYAYNNQYQAWNGDPNVQYVNQGYYPNRADQANQYVSFNEFLSQMQNNGAPSTSNYSNVQYENYPTGQYNYQNIPTTAQNPQLENYGYAAQASNVPSGSESYSMNMQSQYTPVANNPNMYTNAMILKSNLTPTATEFVPKSSMMKPSVSTQNIPESSTVCDDNESRNNYSNVNETRNQYNNSNGSRNNYSNTSEPRSVVGSSSNTNWRERPQSSQQGNETSHKTESYQRTQEPTRNQEFNGRHRDNSHRNNESNARQHDSSSRNQDANSRNHEVESKQFESNGRQQDSSSRTYEATNRNYENTSNKRGQGKSNYKAKSKDDARTFYNSSISKDSQDVRNGRGESSGRGKNWVGTPRLRAMERNSTEDEQYANTYLQDRADRMERDNRDRDRDHPIREKDVRESNRDRDRGDVRERDRDKERDVREKDRDRERDIRDRDREREFRDRDREHREREREHRERERENREKEREHRERERDNREKERASKSEHVPSPARSKARFYNEQVSKEMTQRERLTEQLDKGTLECLVCCERVKQYDPVWSCSNCYHVLHLRCIRKWAMSSMVEGKWRCPACQNTNETIPTDYRCMCGAVRTPEYQRGSVGAHTCGRSCRRPRSCPHPCTLLCHPGPCPPCQATIMKSCGCGAENRSVLCSSKLPQVCGRVCGRTLECGVHKCTQSCHEGPCETCTETVEQVCYCPAAKRRSVSCTAECGGAAQWSCGAGCGRVLACGAHVCRAPCHAPPCLPCQLLPDYVTTCPCGNTKLPKDSRKSCTDPIPLCGNICAKPLSCGPAGDKHFCKMNCHEGPCPECPDKTVLQCRCGHSSREVPCVDLPQMYNNVLCQKKCNKKLSCGRHRCRTVCCAATSHRCAVVCGRTLACQLHRCEDFCHTGHCAPCPRFSFSELSCSCGAEVLFPPVRCGTRPPACSAPCGRPRACRHAPHHACHAGDCPPCVVLTTKRCHGNHEERKTIPCSQEEFSCGLPCGKPLPCGKHTCIKTCHKGPCDTGKCTQPCMEKRPSCGHPCAAPCHVGASGGAGPSSSGGASGSGGASGSGSGQATACPSSAPCRRLVRATCPCSRRHAERTCADNARDYAKMMSALAATKMAEGGTVDVSEVQRPSNMLKTLECDDECRVEARTRQLALALQIRNPDVSAKLAPRYSEHVRATAAREPAFANQVHEKLTELVQLAKKSKQKTRAHSFPSMNRQKRQFIHEMCEHFGCESVAYDAEPNRNVVATADKEKSWLPAMSVMEVLAREAGKRRVPGPVLRAPPAASTSSGPTSGTAQTSNSASNKSSSGWATLTSTNAWAARSQPKQASQPQPAAEKIDYFDNPPDN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01363623;
90% Identity: -
80% Identity: -