Basic Information

Insect: Spodoptera litura
Gene Symbol: -
Assembly: GCA_002706865.1
Location: NC:6759728-6800115[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0024 0.14 12.6 0.0 1 23 524 547 524 547 0.93

2 16 0.027 1.5 9.2 1.9 1 21 678 698 678 699 0.94

3 16 0.034 1.9 8.9 3.8 2 23 762 783 761 783 0.95

4 16 0.00013 0.0071 16.6 0.3 2 23 826 849 825 849 0.97

5 16 0.14 7.8 7.0 0.3 1 23 855 877 855 877 0.93

6 16 0.0033 0.19 12.1 2.9 1 23 883 905 883 905 0.98

7 16 7.7 4.4e+02 1.5 0.0 2 19 941 958 941 961 0.87

8 16 0.043 2.4 8.6 0.2 1 23 1040 1062 1040 1062 0.97

9 16 2 1.1e+02 3.4 7.2 1 23 1069 1091 1069 1091 0.95

10 16 0.0013 0.076 13.4 1.8 1 23 1132 1155 1132 1155 0.95

11 16 0.00022 0.013 15.8 0.8 1 23 1162 1185 1162 1185 0.98

12 16 0.015 0.83 10.1 0.2 2 23 1207 1229 1206 1229 0.96

13 16 0.015 0.84 10.1 3.8 3 23 1255 1276 1254 1276 0.95

14 16 0.00029 0.017 15.4 1.2 1 23 1301 1323 1301 1323 0.96

15 16 0.00012 0.0066 16.7 0.1 1 23 1329 1351 1329 1351 0.97

16 16 0.00037 0.021 15.1 0.7 3 23 1359 1380 1357 1380 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0024	0.14	12.6	0.0	1	23	524	547	524	547	0.93
2	16	0.027	1.5	9.2	1.9	1	21	678	698	678	699	0.94
3	16	0.034	1.9	8.9	3.8	2	23	762	783	761	783	0.95
4	16	0.00013	0.0071	16.6	0.3	2	23	826	849	825	849	0.97
5	16	0.14	7.8	7.0	0.3	1	23	855	877	855	877	0.93
6	16	0.0033	0.19	12.1	2.9	1	23	883	905	883	905	0.98
7	16	7.7	4.4e+02	1.5	0.0	2	19	941	958	941	961	0.87
8	16	0.043	2.4	8.6	0.2	1	23	1040	1062	1040	1062	0.97
9	16	2	1.1e+02	3.4	7.2	1	23	1069	1091	1069	1091	0.95
10	16	0.0013	0.076	13.4	1.8	1	23	1132	1155	1132	1155	0.95
11	16	0.00022	0.013	15.8	0.8	1	23	1162	1185	1162	1185	0.98
12	16	0.015	0.83	10.1	0.2	2	23	1207	1229	1206	1229	0.96
13	16	0.015	0.84	10.1	3.8	3	23	1255	1276	1254	1276	0.95
14	16	0.00029	0.017	15.4	1.2	1	23	1301	1323	1301	1323	0.96
15	16	0.00012	0.0066	16.7	0.1	1	23	1329	1351	1329	1351	0.97
16	16	0.00037	0.021	15.1	0.7	3	23	1359	1380	1357	1380	0.95

Sequence Information

Coding Sequence: ATGTCGGAGGCGCAACCCCCCTTGATTATATGCATGGAGAATGCGACTGGCGAAGAGGTCGCTCTCCGAATAGAACCGGACGATAACTTCCAAATGTTCCTGGACAAAGCCAAGGCGCTACTAGGTTTCGACGTGGACTTAAACTCCATAACAAGAAACCAACCCGTCTCATTATCAGAAAACGTCTATCAGTTCCTAATAAATGCCGAACAAAACTTACAAACAGATGACCTCACACAAAACTTTGATCCAATGTTGGATCCAAATGATGGGGCCAACGATTTGGTTTACATTTTGGACGATGGGACTCAGATAAGGGCGTCTCAAATACATTTTGACAATGATGATCCGCTAATAGATTTGACGGCTGAAAAAATCCCTTTTGTGAAGTACGCGGATGACGTCACAGATGATATAGATCTAGAAAATGTTCATATACAAGAGACTAAGAAGATAAACATTGTAGAAAGCCCAGTATCCCGTTGGTCCAGTAAAAATTCTAGTCCAAAGTGCAGTTTTATAAACTCGTTACCATTTAAATTAGTCTGCAATAACACTTCGGGTTTTGAGGCGCAGTTTACTAAATATTTGGAAGCGAATGCATCAAAAACTTACGCTACTCTTAACCCTGTGACCATCAGGAATAAATCCCCAAAAAGTCTCATTAAAGACAATTTCAAGAATTACGACGAGAGCTATCAAAGGAATGATAATCTTTCGTACACTAGAGAAGAAATTCTCAACATGTTTAAAGATTCCCCTATGACTTCTTTGCCATACGATCAGGGGTATAGCGAAAGGAGACATGTTAGGAAGACAGACCCTTCGAGACTAGTCCACAAGAATTGGACGAAACCCATCTCCTATGTAGATATTGATGGTGTTCTTATAGGCGAAAGTGAGAGCCAGATCTGCTTCATATGTGGCAAACACGTTGATAATAACGTGGATAAACTGTATCTCTTTGATAACGAAGACCAGAGGCTACATCGGTGTTCCCCACAGAAAAAAATGTCGACCCAACTCAAAATTATATGCGAGTGTTGCCTCAATGAAAATTTTAAGCCGTGTCGAATGAAAAGTGCTAATCAATTTCTGAATCCGGACGAGTTTTTGGTCATACGAAATAATCAACAATACATATTTCAGAAGGttaaaaattttagttttacgcATCTAGGGAAAGCTAAGGAAACCATAAACAAGATAGAGACGAAAATAGACAAGGAAGAGTTCGTTAAAGTCGAAATAGGTTCTGACGGAGAGATTATAACGAAGCCCATAGACAACGATCCGAGGTCCGATGACGTCATAATTGTTAAAGATGAGAAGAAGGAGGGTAGTTCGAGCGACGTTGAGATTATAGAGCCGGAACCGGAAATAGATAATATCATAGACAATTTGGAGGAAGCTGATGAGGATGTTAAAGAGTTTTTGGGAAAATATCAGTGTGATAACAGTGAAATTACGGAGTTGAAGTGCAGGTTTTGCGAGCAAATATTCCCTGAACTTTCAGGCGTGACGGAGCACTGCGAGACACATAAACATGATCTGGAAGATGGGGAGGTGTTCCCATGTCCCCTATGTAATTATGGCTATGCGAATCTGAAATGGCTGAAAGCTCATTTAATAGCGGCTCACGAGAAATCTGAAACTAAGAAACCTTCAAAAGATGAAACTGAAACCAATGCAGACGATGTTGACAAAGACCTAATAGTTACCGAGCCAGAGACGGGAACTCCATCATCGCCCGTAGCGACGCGCACGCGCAGCTCAAACAAAAAGGATGGAGATAAAAAAGATAATGAAAATTCTGAAGACAAGACAGATTCTAATGCTGATACGACGGAACCCACCACAAACGCAGAGCCACCCATCATAAAAACGGAGGTTAAGCAAGAATGTCTGGACAGCAGCGAGGATGAGATCTGGATAGTTCAGACAGCTGACGCTGATGCGCAGGAGTTGCAGAAACTCTTATGTGCTGCTAAGGTGAAAGAAGATGGACAAGAAGGCAATTCAGAGAAAACGCATAAATGCTATAATTGCagTCAAGTATTTGCAAGCGCGGATGGTTTATCGAACCATCGATGCAGGAGACGAGGCCGGAAGAGAAAGTCCAAGGATCTCGTCAATCTAATCTGTATACCCACTGAAGAAGACTTCTTGAAGAGAGCGCAAGGACGTCCCAGACAAAATGATTCTGGAATTGACAACGATCTTATTGTTATGCGTCCAAGAAAACGCCGCAGTCGGGAACTGACTTCCAATCCTCAAGTCGTGACCTGTCACAACTGTAACGAGTCGTTCACATCCAAAGTTAGACTGAAGTTTCATATGCAATTCCACGACACAGCCCGGCCGGTCCGGTCGGACGGGCGCTACCTATGCGCGGAGTGTGAGGGCGCCACCTTCGCCACGGAGACAGAACTCTTCGACCACGTACACTTCCAACATGATAAGCAGAAGCGGTGGCAATGTCCAGTGGAAGGGTGCGGAAAAACTTTCTTTCTGagGGCAACTCTAACGAAACACAGTcgtacacacacagacacacggCGCTACGTGTGTGTGACGTGTGACAAGCGGTTCCTCGACAAACAGACGTTGGATGAACATGGAGTCACGCATTTACAGATAAAACCCTTCCAATGCCACATCTGCCTGAAGCAACTGACCCGTCGGTCCCGGCTCCGCATGCACGTGCGCGCGCACGAAGAGGAGCTGGCGCCCCGCCTCGTGCGCGTCTGTGCAGTCTGCGCGCGGGCCTTCAGGGACCTTACTACTGCACAGGAGGAGCTGGCGCCCCGCCTCGTGCGCGTCTGTGCAGTCTGTGCGCGGGCCTTCCGGGACCTTACTACTGCACAGGAGCACGCCTCAAAATCGACGGAATGTATAGAAGCTTTCGCCAACGAGCTGAAGGAGGAAGCTGAAGAGGTCACAGTACAACTGTCGCCCACCAGTGGACTAGTCAGACATACTGTGCAGATTGTGGAATCCCCAAAACTGTCGAAACCTATAAAACGCGAGGTATCCCACGAGGTGGGGGCCCCACTCCTGTCTCAGTTGGCGGACGAGGCGCGCGCCCTCATACGAGTTGTTGAGATTGAGAAGGCATTCCGCTGCGAATATTGCGAGGaTGTCTTTTACCTAGAGAGCGGTCTGAACTCGCATCGCGCTATACACAAGGGCGTGAAGAATCCGTTCACTTGCCACATATGCAAAGTCAGCTTCGCTACTTACTCCAGATGCACGACCCACAAAACGACGCATGGTTTCTACAAGCGCTCCCTGGCGGACGCCAAGAAGACTGACGGCCTGCCTGCCACTGACGGAGCCAACAGGTCCGCCACTGGTATACTCGGATACGGGGACTTTCCAGTTGTCAAACATTTCTTGTGTGAGGATTGCGGGCGTTCCTACTTACACTGGACATACCTTCAAGTACACCGGCGTATGAAACATGCGAACgaaaactttttatataaatgtaaccAGTGCGAATTGACCTTCCCTAACAGTTGGAGTCTAGCGTACCACCGTAAGAAGATCCACGGTAAGACTGGACCTGACGATGCTGGAGCCACCAGCAAGATCAGCAGGGATGATTACAGGATACCCTGCCGAGACTGCAGCGAAGTTCTACCAAATAAGACTGCGTTGTATAAACACAGGAAGAAGGAACACAGCGATGGAGCGATACGAGCCAACAGTAAAactgGTCCTTACAGCAACGAGGAATCGAACTCTGGAGGCGGCGCGTGTACCCGCTGCCATGCTACCTTCACTCATGCTGCTGATCTCCATAAACACGTCAAAGAAGACCACGCGGGcggggcgggcggcgcgggcgcaacGATTACTTCTCTCACAACGGGCGGCGGGTGCGGGCGGCGGCCGCACGCGTGCCCGGTGTGCGGCCACGCGTTCCGCACGCTGTCGATGCGCAACGAGCACCTGCGGGTGCACACGGGGGAGCGACCCTTCCCCTGCGACGTCTGCGGGGTCGCCTTCAGGAGATCGACAGCGATGCGCAACCACCGCCTCATCCACACCGGCGTCCGCGCCTGGGCCTGTGGGCGGTGTCCCAAACGGTTCCGGATTCGATCCGATCTGAGGACACATCTCAGACTCAAACATCCCGCTACTATTGTTGTTGTTGAGATGGAAGGTCTAAACCCGACTTCAGAAGAGATCATGAAGACGCTCGCATTACAAAATGTACCTCACGACAAACTTATAGAGATTACTAAAATGTCCTTTTCCAAGGGTACATCGAGTGTGATACCGTCGACAGCGCGCGCCCTGTCGGCGCTGAGTACCGTCCCGCGCACTCACGTCGCCTGCATCAAACCCACGCCCGCCAGGATGCtcgATGAATTTCAACCAGCTCGCCGTGGCCGTGGTATCGCCAAAAACCCACGGCGACCGAAAATTCTGCAGCGAGGCGAAACTGCGCCACATGAGAACACTGCCTACCCCATTGTTAGCGGAGAGGAATTATCAGATTTAAACGTTCAGTTGTTACTGCGAGACGGAGTTTTGGTGAACGGCAACCAGATGGTGCAACTACAACTGGACGATCCGATGTTGATGGAATAA
Protein Sequence: MSEAQPPLIICMENATGEEVALRIEPDDNFQMFLDKAKALLGFDVDLNSITRNQPVSLSENVYQFLINAEQNLQTDDLTQNFDPMLDPNDGANDLVYILDDGTQIRASQIHFDNDDPLIDLTAEKIPFVKYADDVTDDIDLENVHIQETKKINIVESPVSRWSSKNSSPKCSFINSLPFKLVCNNTSGFEAQFTKYLEANASKTYATLNPVTIRNKSPKSLIKDNFKNYDESYQRNDNLSYTREEILNMFKDSPMTSLPYDQGYSERRHVRKTDPSRLVHKNWTKPISYVDIDGVLIGESESQICFICGKHVDNNVDKLYLFDNEDQRLHRCSPQKKMSTQLKIICECCLNENFKPCRMKSANQFLNPDEFLVIRNNQQYIFQKVKNFSFTHLGKAKETINKIETKIDKEEFVKVEIGSDGEIITKPIDNDPRSDDVIIVKDEKKEGSSSDVEIIEPEPEIDNIIDNLEEADEDVKEFLGKYQCDNSEITELKCRFCEQIFPELSGVTEHCETHKHDLEDGEVFPCPLCNYGYANLKWLKAHLIAAHEKSETKKPSKDETETNADDVDKDLIVTEPETGTPSSPVATRTRSSNKKDGDKKDNENSEDKTDSNADTTEPTTNAEPPIIKTEVKQECLDSSEDEIWIVQTADADAQELQKLLCAAKVKEDGQEGNSEKTHKCYNCSQVFASADGLSNHRCRRRGRKRKSKDLVNLICIPTEEDFLKRAQGRPRQNDSGIDNDLIVMRPRKRRSRELTSNPQVVTCHNCNESFTSKVRLKFHMQFHDTARPVRSDGRYLCAECEGATFATETELFDHVHFQHDKQKRWQCPVEGCGKTFFLRATLTKHSRTHTDTRRYVCVTCDKRFLDKQTLDEHGVTHLQIKPFQCHICLKQLTRRSRLRMHVRAHEEELAPRLVRVCAVCARAFRDLTTAQEELAPRLVRVCAVCARAFRDLTTAQEHASKSTECIEAFANELKEEAEEVTVQLSPTSGLVRHTVQIVESPKLSKPIKREVSHEVGAPLLSQLADEARALIRVVEIEKAFRCEYCEDVFYLESGLNSHRAIHKGVKNPFTCHICKVSFATYSRCTTHKTTHGFYKRSLADAKKTDGLPATDGANRSATGILGYGDFPVVKHFLCEDCGRSYLHWTYLQVHRRMKHANENFLYKCNQCELTFPNSWSLAYHRKKIHGKTGPDDAGATSKISRDDYRIPCRDCSEVLPNKTALYKHRKKEHSDGAIRANSKTGPYSNEESNSGGGACTRCHATFTHAADLHKHVKEDHAGGAGGAGATITSLTTGGGCGRRPHACPVCGHAFRTLSMRNEHLRVHTGERPFPCDVCGVAFRRSTAMRNHRLIHTGVRAWACGRCPKRFRIRSDLRTHLRLKHPATIVVVEMEGLNPTSEEIMKTLALQNVPHDKLIEITKMSFSKGTSSVIPSTARALSALSTVPRTHVACIKPTPARMLDEFQPARRGRGIAKNPRRPKILQRGETAPHENTAYPIVSGEELSDLNVQLLLRDGVLVNGNQMVQLQLDDPMLME

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00121732;
90% Identity: -
80% Identity: -