Slit012143.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Spodoptera litura
Gene Symbol
Spopl
Assembly
GCA_002706865.1
Location
NW:45653-47470[+]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.4e-24 8.2e-22 77.3 0.5 1 109 206 312 206 313 0.93
2 2 8 2e+03 -1.2 0.0 81 107 316 342 311 344 0.83

Sequence Information

Coding Sequence
ATGTATTTAGTGCTTCCAACTTGTATTCGCGGGTGTATATGCGTGCGGTGCATAAAGTTTATTCGGTGTAGTTGGCGTAGcacatattttatttggtttgttCGAATTGAGATTCTTAGAACTATGTCTAGTATAAATTATACTACCCGTACCGAAGGACAAACCAAAATAAACACTATAATATGGACAGTgccaaattttattattctgttggaaaacaaaactaatagaGAGTTTCGTACCGAAAAATCTAAGGATCCTACTACTGATTTGTCGGAATCAAGATTCCAGTTGAAGATGCAATTCCTAGGAAGAGATAATGACATCATAGAAATCTACTACCTGTCCCCAACTCCTGTGTTCTTGAAGTCTGTCTTAACCATATGTCTGAAACGTTTCGAAGAGCGGTCGATAGTAATTAAAGAGTATCACACTGTACAGGCAAATAAATGGCAGTACTTAGCAACATTATTCAAACGAGACATAGCCAGTTATGATGGCAGAGACATATTCCTACTTAGTGATGGCAGTTTGAGACTGAAATTCCAGTTTATGGTAACTAATGATATTAAAGTGGACCGCTCTAATATCCCTGAGGCGCAACTGAGCaatgattttgaaaatttactAAACAATGGTTTGTTTTCTGATGTCACTATGAAATCTGTAGAAGATGTTGAATATAAGGTGCACAAGGCTGTGTTAGCCAGCCGAAGTGCAGTTCTAAAGGCACATTTTGAACATAACACTACTGAATGCCTTACTAATATTGTTGAATCTCCATTAGAGTCTGAGGTATTGAGAGAAGTCTTGACTTTCATATACAGTGACAAAGCTCCAAGGGTGGATGAAATACCAGAGAAGTTGTTGGCTGCTGCAGACTACTACCAACTAAGCAGACTGAAGAATCTCTGTGAGGAAGCTCTGCATAAGAAATTAACAGTGGAAAATGCAATAGAAACCTTACAACTGGCCGATCTTCACTCTGCCAATACTCTGAAGCAACTCACACTTGAGTTTATAAAGGATGGTCAGGCAAAACTCATAACAAAGACTGAAGGTTGGAATAAAGTGAAGTCTGTGGAACTAATCAAAAGGATTTATGAATACATCATGACTGATGATATTGATGCAGATATTAAGTAG
Protein Sequence
MYLVLPTCIRGCICVRCIKFIRCSWRSTYFIWFVRIEILRTMSSINYTTRTEGQTKINTIIWTVPNFIILLENKTNREFRTEKSKDPTTDLSESRFQLKMQFLGRDNDIIEIYYLSPTPVFLKSVLTICLKRFEERSIVIKEYHTVQANKWQYLATLFKRDIASYDGRDIFLLSDGSLRLKFQFMVTNDIKVDRSNIPEAQLSNDFENLLNNGLFSDVTMKSVEDVEYKVHKAVLASRSAVLKAHFEHNTTECLTNIVESPLESEVLREVLTFIYSDKAPRVDEIPEKLLAAADYYQLSRLKNLCEEALHKKLTVENAIETLQLADLHSANTLKQLTLEFIKDGQAKLITKTEGWNKVKSVELIKRIYEYIMTDDIDADIK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00072968;
90% Identity
iTF_00761825; iTF_01264833; iTF_00405154; iTF_00715906; iTF_01029410; iTF_01416034; iTF_01436259; iTF_01564835; iTF_01361796; iTF_00018309; iTF_00441669; iTF_01361797; iTF_00345958; iTF_01425254; iTF_00010280; iTF_01026472; iTF_01538920; iTF_00114217; iTF_00636650; iTF_00327211; iTF_01437227; iTF_01464299; iTF_01487851; iTF_00017485; iTF_00282573; iTF_01076685; iTF_01221741; iTF_00171984; iTF_00909008; iTF_01251984; iTF_00637841; iTF_00942962; iTF_00994482; iTF_01083506; iTF_00185459; iTF_01246067; iTF_00009204; iTF_00674420; iTF_00819316; iTF_00112629; iTF_00429173; iTF_00958069; iTF_01166869; iTF_01222614; iTF_01430070; iTF_00000471; iTF_00281527; iTF_01312343; iTF_00186424; iTF_01547992; iTF_01502233; iTF_00428283; iTF_01416987; iTF_00007261; iTF_00072223; iTF_00794815; iTF_01316511; iTF_00001312; iTF_01317440; iTF_00364193; iTF_00968176; iTF_01527486; iTF_01535075; iTF_01027489; iTF_00273762; iTF_00450306; iTF_00383843; iTF_00924931; iTF_01247267; iTF_01533219; iTF_00888420; iTF_01532260; iTF_00274565; iTF_00446373; iTF_00772165; iTF_00908070; iTF_00973926; iTF_01031270; iTF_01084422; iTF_00040039; iTF_00043719; iTF_00301351; iTF_00809319; iTF_00122568; iTF_00300392; iTF_00952840; iTF_00685609; iTF_01062025; iTF_00121610; iTF_00447402; iTF_01085546; iTF_01260266; iTF_01285706; iTF_00050091; iTF_00622988; iTF_00951980; iTF_01028460; iTF_00850925; iTF_01526222; iTF_00445359; iTF_00712079; iTF_01064815; iTF_00177328; iTF_00302288; iTF_00726608; iTF_00037969; iTF_00758418; iTF_00786130; iTF_01030386; iTF_01534098; iTF_00810259; iTF_00041044; iTF_00147668; iTF_00906324; iTF_00124437; iTF_00907189; iTF_00237910; iTF_00928854; iTF_00036983; iTF_00038999; iTF_00042808; iTF_00831384; iTF_01094200; iTF_00041945; iTF_00745946; iTF_00374364; iTF_00783677; iTF_01063901; iTF_01095101; iTF_01117501; iTF_00425598; iTF_00851966; iTF_00784543; iTF_01192863; iTF_00071648; iTF_00120672; iTF_00785344; iTF_01062976; iTF_01093280; iTF_01119520; iTF_00468292; iTF_00173222; iTF_00822118; iTF_00027912; iTF_00275458; iTF_01401429; iTF_00027003; iTF_01377640; iTF_00163114; iTF_01118474; iTF_00111809; iTF_01440234; iTF_00123531; iTF_00844524; iTF_01501301; iTF_01337023; iTF_00677806; iTF_00828078; iTF_00667695; iTF_00449329; iTF_00375477; iTF_00209010; iTF_00208044; iTF_00806865; iTF_01090932; iTF_00178357; iTF_01403584; iTF_00150772; iTF_00077645; iTF_01230773; iTF_01441247; iTF_01342356; iTF_00622126; iTF_01426049; iTF_01179628; iTF_01173424; iTF_01073746; iTF_01180440; iTF_01124735; iTF_00382817; iTF_00074690; iTF_00035875; iTF_00075686; iTF_00683494; iTF_01282502; iTF_01020455; iTF_01081735; iTF_01281479; iTF_00006408; iTF_01335144; iTF_00076715; iTF_01125613; iTF_00365070; iTF_00682575; iTF_00034929; iTF_00408593; iTF_01071761; iTF_01280529; iTF_00279251; iTF_01503123; iTF_00752213; iTF_00961078; iTF_00284695; iTF_00448282; iTF_01504029; iTF_01279423;
80% Identity
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