Sfru022206.1
Basic Information
- Insect
- Spodoptera frugiperda
- Gene Symbol
- pnr
- Assembly
- GCA_011064685.1
- Location
- JANIPB010001857.1:745037-748693[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.5e-11 1.5e-07 31.3 1.7 1 25 445 468 445 468 0.99 2 2 6.7e-18 2.2e-14 53.1 7.5 1 35 490 523 490 524 0.97
Sequence Information
- Coding Sequence
- ATGGAGAACGTGGCTCAGATGGAGCAGCCCGACGTGCACGCCTCGGCGGAGGCTCTCGAGCTGGTGAAGAACGAGGCGCGCTCCGAGCAGGAACAGGCCCCGGAGAATTCTAACGCCACCGACGCGGCACCCGAGCTGCACGACCAGGCGGGGCCCGGGGCCCTGCACGACCAGACGGGCCCTGCCACTCTGCGTGAATCCTCCCCTCCCGCGCACTCCCACTCGGTCATCACCTCGCGCCGAGCTGTGCGCACCATCACCGCCGCGGGCCACATCACCACGGATGAACCCGGGGAACTCGCAAACGACGAAGGCCAACAGTTACAAGCGCAGCACTACGCCGCCGCGAAGCTGGAGGACGCTGAGGCCCGAGAGCAGCAGCACTATGACGAGGAGCGCCTGCGCCTCGCTGAAGCAGAAACCTCACGATACCTCGCCTTTAAACAGGAGCCGTACCGTGCACTGTCCTCGCCCAGCGACAAGCGCGCGCCGCCGCAGTACGTGCGTCCGCCGCAGCGGCCGCCGTACGGCCGCGGGCTGGCGCTGCGGTACGGCGCCCCGCATCACGTGATCGTAGCACAGGAAGGTGAGGCCGAGGAGGCCGCACATGATGCTTTTCTACACAAGGAAAAGGAACAGCTCCAGGCGTACGCGAGTGGCGAAGCTAGCTCAACTGACAACCGACAGTATGCTGCCGTACTGAGCGACCAAGCAATCGGTCGGAGTCGCATATCAGCAAGTGAAGTACGAGGCGCGGGGAGAAGGAGAGCCTCGGCCCCGACTACTTATGCGAGCCTGCAGCCAGTCACGTCAGTACACGGGGGATACGCGTACGCGGGCCAGAGCCCTCAATACGCCGGCGGAGGATACGGCGCGTACGCCGCCGGGGGCAGCAAGGAACTGCTGACTCTGTACGGCGGCGGGCCGGCCACGGCGGGGGGCGCGGCGGGGGCGCGGGGGGACGAGTCCCCGCCGGGACAGCTGCTGTACCGCAGCGACCCCACGCTGTCGTCCTCGTCGCTGGCGCGCGGCACGCACGTCGTGTACGGCTCCGTGGTGCCGCAGTCCCAGGCCGTGTATGAGACGCCGCCCAGCCCCAACTCACAACAGGTGACGCTGTACACGCACGGCAACACGGTGCAGTACAAAGTGGGAGGGGAGCACTACCTGGGCCAGGGCGGCGGCGTGGAGTACGTGCCAGTGTCGGGGTACGAGGGGGGGCTGCTGGTGGAGGGCTACCCTGCGCCCGCGCAGGCCTGGCCAGCACACAACCTTCTACCCATCGACGACGGCTTTGATCCCAGTATGGCAGGCATGGGCGAGGTGAAGGAGTGCGTCAACTGCGCCGCCGCCACCACCCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGGACAAAAAGGCCAAGCCACAGCAAGCTTTGCCGACAAACGGGAACCGGCGCGTGGGCGTGACGTGCGCCAACTGTCGCACGTCCAACACGACGCTGTGGCGGCGCAACAACAACGGCGAGCCCGTCTGCAACGCGTGCGGACTCTATTACAAGCTGCACAATGTGAACCGGCCGCTCAGCATGAAGAAGGACGGCATCCAGACGAGGAAGCGGAAGCCCAAGAGCATGGGGAGCGGGCACGGCGGAGTGGCGCGCCCCGGGGCCGGGCCGCTGGCGGTGGACGCACACTCGCACAAGGTGCTGCCCCCGCTGTACGCGGCCGTGGAGGGCGCGGGGGGCGCGGGCGCGGGCGGGGGCGCGGGGGGCGCGGCACCCGCTCCGCTGCTGCTGCTGCCCGCGGCCGCGCGCGCCACGCGGCCGACATGTGAGTACTGCGGGCGACCCTCGGCGCAGGACTTGGCTTCACTTCTTCCCGCAGCCTTCCTCGCGCGGACTGGCTCGCCGGCTCCTGTCCCCGCGTCTACATGGCCTCGCTGCCGTGCTCCGGTACCAGCGCTAGATCGCAGCGCGCAGCACTACCGGCCGCCGTAA
- Protein Sequence
- MENVAQMEQPDVHASAEALELVKNEARSEQEQAPENSNATDAAPELHDQAGPGALHDQTGPATLRESSPPAHSHSVITSRRAVRTITAAGHITTDEPGELANDEGQQLQAQHYAAAKLEDAEAREQQHYDEERLRLAEAETSRYLAFKQEPYRALSSPSDKRAPPQYVRPPQRPPYGRGLALRYGAPHHVIVAQEGEAEEAAHDAFLHKEKEQLQAYASGEASSTDNRQYAAVLSDQAIGRSRISASEVRGAGRRRASAPTTYASLQPVTSVHGGYAYAGQSPQYAGGGYGAYAAGGSKELLTLYGGGPATAGGAAGARGDESPPGQLLYRSDPTLSSSSLARGTHVVYGSVVPQSQAVYETPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYVPVSGYEGGLLVEGYPAPAQAWPAHNLLPIDDGFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNADKKAKPQQALPTNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGSGHGGVARPGAGPLAVDAHSHKVLPPLYAAVEGAGGAGAGGGAGGAAPAPLLLLPAAARATRPTCEYCGRPSAQDLASLLPAAFLARTGSPAPVPASTWPRCRAPVPALDRSAQHYRPP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01362177;
- 90% Identity
- -
- 80% Identity
- -