Sexi006451.1
Basic Information
- Insect
- Spodoptera exigua
- Gene Symbol
- pnr
- Assembly
- GCA_011316535.1
- Location
- CM022061.1:12637621-12648503[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.1e-16 3.1e-13 49.4 3.3 1 35 542 575 542 576 0.97 2 2 7.8e-18 2.2e-14 53.1 7.5 1 35 603 636 603 637 0.97
Sequence Information
- Coding Sequence
- ATGGCAGCGCGGCCTCGCACGCACACAGGCGCGCGGACCGGCCCACTCGGAAAGCTCGCCTCTCACCTGGAGCGCAGCAGACGAGCTGAGCGCTCGCCGCCACACTCCGTCGCCCGCGACTCTCGCGCCCGTACTTACTCGCGCCCGCAGAGCGAGCCCTGCACCCACCGCACGCAGCCCGCGACCAGCGCCCGGCGCACGGTAGGAATGGAGAACGTGGCTCAGATGGAGCAGGCCGACGTGCACGCCTCCGCGGAGGCCCTCGAGCTGGTGAAGAACGAGGTGCGCTCCGAGCAAGAGCAGGCCCCGGAGAACTCGACCGCTACAGACGCGCCAGCCGACCTGCACGACCAGCAAGCGGGCCCCGGACCCCTGCACGAGCAGGCCGGCCCCGCCAGTATGCGAGAGCCCTCCCCTCCTGCGCACTCACACTCCGTCATTACCTCGCGCCGAGCTGTGCGCACTATCACCGCCGCTGGGCATATCACCACTGATGAGCCCGGGGAACTCGCCAACGATGAAGGAGTCAAGGATGAGCCGCAGGAACAACCTCCGCTGGACGAGCAACAGCTGCAAGTTCAGCACTACACCGCCGCCAAGCTGGAGGACGCTGAGGCGCGAGAGCAGCAACACTACGACGAGGAGCGGCTGCGCCTCGCTGAGGCAGAAACGTCGCGCTACCTCGCCTTCAAACAGGAGCCGTACCGCGCGCTGGCGTCGCCCGGCGACAAGCGCGCGCCGCCGCAGTACGCGCGCCCGCCGCAGCGGCCCGCCTACGGCCGCGGGCTCGCGCTGCGCTACGGCGCGCCGCATCACGTCATCGTGGCGCAAGACGGGGACACTGAGGAGGGTGCACACGATGCTTTCCTGCACAAGGAAAAGGAACAGCTCCAGGCCTACGCGGGTGGAGAGGGTACCACCGCTGATAACCGACAGTATGCTGCCGTACTGAGCGACCAAGGTGCTTCTACTCTAGAGATGATCCAAACCACGGCCCTGAACAACCAGCAGTCAGTCGGCGTCGCATACCAGCAGGTGAAGTACGAGGCGCGGGCAGAAGGCGAGCCTCGGCCGACTACTTACGCCAGCCTGCAGCCGGTGACGTCAGTACACGGGGGATATGCGTATGCGGGACAGAGTCCGCAGTACGCTGGCGGGGGATACGGGGCGTACGCCGGGGGCAGCAAGGAGTTGCTGACTCTGTACGGCGGCGGCCCCGCCGCGGCCGGGGGCGCCGGGGGCGCGCGGGGCGACGAGTCCCCGCCGGGGCAGCTGCTGTACCGCAGCGACCCCACGCTGTCGTCCTCGTCGCTGGCGCGGGGCACGCACGTCGTGTATGGCTCCGTGGTCCCGCAGTCCCAGGCAGTGTATGAGACACCGCCCAGCCCCAACTCACAACAGGTGACGCTGTACACGCACGGCAACACAGTGCAGTACAAGGTGGGGGGCGAGCACTACTTGGGCCAGGGAGGCGGCGTGGAGTACGTGCCAGTGTCAGGGTACGAAGGCGGCCTGCTGGTCGAGGGCTACCCTGCACCTGCGCAAGCCTGGCCTGGACATAACCTTTTACCCATCGACGACAGCTTTGATCCCAGTATGGCAGGCATGGGCGAGGTGAAGGAGTGCGTGAACTGCGCGGCGGCCACCACCCCGCTGTGGCGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTGTACACGCGCATCAACGGGGTCAACCGGCCGCCGCTCAAGGGACAGAAGGCCAAGCCGCAGCAGGCCCTGCCGAGCAACGGCAACCGGCGCGTGGGCGTCACGTGCGCCAACTGTCGCACGTCCAACACGACGCTGTGGCGCCGCAACAACAACGGGGAGCCCGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACGTGAACCGGCCGCTCAGCATGAAGAAGGACGGCATCCAGACGCGGAAACGGAAGCCCAAGAGCATGGGAGGAGGGCACGGCGGCGTGGCGCGGGCCGGGGGCGGGCCGCTGGCGGGGTACCAGCGCTAG
- Protein Sequence
- MAARPRTHTGARTGPLGKLASHLERSRRAERSPPHSVARDSRARTYSRPQSEPCTHRTQPATSARRTVGMENVAQMEQADVHASAEALELVKNEVRSEQEQAPENSTATDAPADLHDQQAGPGPLHEQAGPASMREPSPPAHSHSVITSRRAVRTITAAGHITTDEPGELANDEGVKDEPQEQPPLDEQQLQVQHYTAAKLEDAEAREQQHYDEERLRLAEAETSRYLAFKQEPYRALASPGDKRAPPQYARPPQRPAYGRGLALRYGAPHHVIVAQDGDTEEGAHDAFLHKEKEQLQAYAGGEGTTADNRQYAAVLSDQGASTLEMIQTTALNNQQSVGVAYQQVKYEARAEGEPRPTTYASLQPVTSVHGGYAYAGQSPQYAGGGYGAYAGGSKELLTLYGGGPAAAGGAGGARGDESPPGQLLYRSDPTLSSSSLARGTHVVYGSVVPQSQAVYETPPSPNSQQVTLYTHGNTVQYKVGGEHYLGQGGGVEYVPVSGYEGGLLVEGYPAPAQAWPGHNLLPIDDSFDPSMAGMGEVKECVNCAAATTPLWRRDGTGHYLCNACGLYTRINGVNRPPLKGQKAKPQQALPSNGNRRVGVTCANCRTSNTTLWRRNNNGEPVCNACGLYYKLHNVNRPLSMKKDGIQTRKRKPKSMGGGHGGVARAGGGPLAGYQR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01425636; iTF_01193285; iTF_01363601; iTF_00785688; iTF_00784058; iTF_00426015; iTF_01362757; iTF_00172402; iTF_01286087; iTF_00450668; iTF_00121058; iTF_00786436; iTF_00784864; iTF_00071973; iTF_00238373; iTF_00758821; iTF_00726982; iTF_00173831; iTF_01441600; iTF_00124840; iTF_00123890; iTF_00122012; iTF_00123006; iTF_00668104; iTF_00039433; iTF_00072393; iTF_00746377; iTF_01247721; iTF_00148138; iTF_00374827; iTF_01342667; iTF_00908460; iTF_00906717; iTF_00038350; iTF_00177742; iTF_00301758; iTF_00907538; iTF_00925394; iTF_00050483; iTF_01260660; iTF_01231221; iTF_01526679; iTF_00449784; iTF_01339608; iTF_00364569; iTF_00037436; iTF_00623676; iTF_01527933;
- 90% Identity
- iTF_01363601;
- 80% Identity
- -