Sfru015096.1
Basic Information
- Insect
- Spodoptera frugiperda
- Gene Symbol
- -
- Assembly
- GCA_011064685.1
- Location
- JANIPB010000774.1:34594-35538[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.4e-12 1.5e-08 34.6 0.0 4 40 16 52 13 57 0.86
Sequence Information
- Coding Sequence
- ATGGATCACAAAAACAAGTACAATAGGTTTCAATACAGTCAACAAGCACTTGAAGCAGCTCTTAAGTCAATTGCTAATGGAGAACTAAATATCAATAAAGCAAGCAATGTGTACAAGATACCAAAATCGACTTTACATAATAAAATCACAAACAAGGTACCTTTGCAAAGAAAAATGGGCCCCCAGTCCGAGCTTACTGTAGATGAAGAAGCTAAGATTTCTGACTGGATTATAAATAAAGCTAAATTAGGTTTTCCAATACACCCAGAAGAAGTGTTCGATACAGTTGAAAATTTTATGACCATTAATAATAGGAAAAATAAGTTTACCGGGAATAGACCAGGGAAAAGGTGGCTTAGTTTATTCTTAAAAAGGCATCCTGAAATTACAAAAAGGAATGCGGAGATTATATCCAAAGGCAGAGCCGCAGTTACTGAACAAGTTATCAGAGCTTGGTTCAAGGAACTCGAAGAGTTTTTAACAGAAGAACAAGCATTGAATATAAAAGACGACCCCAGTCGCATATTTAATGCCGATGAAACAGGTGTAACGACCTGCCCGAAAAACGGAACAATATTAGGGCCCAAAAATTACAGAAACACTTACGAGATTTCGGGTGGGAAAGAAAAAGAATCACTTACAGTTTTATGTAATTTTGCAGCAGATGGGAGGGATGTTCCTCCATTTGTCATATACCCTTACAAACGAATGCCTCCGGCTGTGATACAAAATTTTCCAGATACCTGGTTTATGGGGCGATCAGACAGTGGATGGATGGTGTCCAACACTTTTTTTATATACATACAAAAGTTTTACGATTGGCTGGTTCAGAATCAAATACAATTACCGTTTTGTCAGGAAAAGCGAATATTAATATTCTGCTTATATCCGAATGCCCAATGCACATATTACAGCCCTGTGATGTCGGCATTTTTGGCCCTATAA
- Protein Sequence
- MDHKNKYNRFQYSQQALEAALKSIANGELNINKASNVYKIPKSTLHNKITNKVPLQRKMGPQSELTVDEEAKISDWIINKAKLGFPIHPEEVFDTVENFMTINNRKNKFTGNRPGKRWLSLFLKRHPEITKRNAEIISKGRAAVTEQVIRAWFKELEEFLTEEQALNIKDDPSRIFNADETGVTTCPKNGTILGPKNYRNTYEISGGKEKESLTVLCNFAADGRDVPPFVIYPYKRMPPAVIQNFPDTWFMGRSDSGWMVSNTFFIYIQKFYDWLVQNQIQLPFCQEKRILIFCLYPNAQCTYYSPVMSAFLAL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00147282; iTF_01192553; iTF_01192552; iTF_01192554; iTF_01192555; iTF_01192556; iTF_00726221; iTF_01192557; iTF_01440917;
- 90% Identity
- -
- 80% Identity
- -