Fyps019634.1
Basic Information
- Insect
- Fissipunctia ypsillon
- Gene Symbol
- -
- Assembly
- GCA_947568875.1
- Location
- OX387646.1:16789821-16790525[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-12 5.2e-10 39.7 0.0 1 39 14 52 14 58 0.85
Sequence Information
- Coding Sequence
- ATGGATTCCAATAAAAATAAATACGAAAGGTTTCGATATACCCAAGAAACATTGGAAAGAGCTCTTAGGTCCATTGCTAATGGAGAACTAACTATTAATAAAGCAAGTAATGTTTTTAAGATACCAAAATCCACCCTACATAACAAATTCACTAATAAAGTTCCCTTGCAAAGAAAAATGGGTCCTCCATCCGAACTCACTCAGAATGAAGAGGCTAAGATTGCTGAGTGGATAATAAATAAAACCAAATTAGGTTTTCCAATGCACCCAGAGGAAGTTTTTGATACTGTTGAATTTTTTTTAAATACCAACAATAGAAAAAGCAAGTTTACAGGCAATAGGCCAGGAAAAAAGTGGCTCAAGTTATTTCTAAACAGGCATCCTGAGATTACTAAAAGAAATGCGGAAGTAATTTCTAAAGGCAGAGCCGCAGTTACTGAAACATCTATCAGGGCTTGGTTTAAGGAACTAGATCAGTTTTTGACTGAAGAACATGCTTTAGATATTAAAAACAATCCTAGTCGGATATTTAACACTGATGAAACAGGTGTTATGACCTGCCCCAAAACCGGAATTATATTGGGACCTAAGAATTATAGAAATACCTACGAAATCGCCAGTGGTAAAGAAAAAGAATCTATAACAGTTCTTTGTACTTTCGCTGCCGATGGAAAGGATGTTCCTCCATTTGTAGTATCCTTATAA
- Protein Sequence
- MDSNKNKYERFRYTQETLERALRSIANGELTINKASNVFKIPKSTLHNKFTNKVPLQRKMGPPSELTQNEEAKIAEWIINKTKLGFPMHPEEVFDTVEFFLNTNNRKSKFTGNRPGKKWLKLFLNRHPEITKRNAEVISKGRAAVTETSIRAWFKELDQFLTEEHALDIKNNPSRIFNTDETGVMTCPKTGIILGPKNYRNTYEIASGKEKESITVLCTFAADGKDVPPFVVSL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01362390;
- 90% Identity
- iTF_01192552; iTF_01192553; iTF_01192554; iTF_01192555; iTF_01192556; iTF_01192557; iTF_00973688;
- 80% Identity
- -