Sfru004758.1
Basic Information
- Insect
- Spodoptera frugiperda
- Gene Symbol
- tfap2e
- Assembly
- GCA_011064685.1
- Location
- JANIPB010000690.1:241176-252096[+]
Transcription Factor Domain
- TF Family
- AP-2
- Domain
- TF_AP-2 domain
- PFAM
- PF03299
- TF Group
- Basic Domians group
- Description
- Activator protein-2 (AP-2) transcription factors constitute a family of closely related and evolutionarily conserved proteins that bind to the DNA consensus sequence GCCNNNGGC and stimulate target gene transcription [PMID: 2010091, PMID: 1998122]. Four different isoforms of AP-2 have been identified in mammals, termed AP-2 alpha, beta, gamma and delta. Each family member shares a common structure, possessing a proline/glutamine-rich domain in the N-terminal region, which is responsible for transcriptional activation [PMID: 2010091], and a helix-span-helix domain in the C-terminal region, which mediates dimerisation and site-specific DNA binding [PMID: 199812]. http://www.ebi.ac.uk/interpro/entry/IPR013854
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.5e-56 3.5e-52 177.5 0.0 41 196 85 237 83 238 0.96
Sequence Information
- Coding Sequence
- ATGGTGGCGGCGAGAGGCGAGCAGACTACGGTGCTCGGGAACAACATGAGTTGGCCCTACACCATGGCGCTACACTCCACGGAAGAAACGCCGAACGCTGGCATGGATGACACCACGGGATTCATGACGGATCTCCCTCTATTAAAAACAATGAAAGGTCGTGATGGGCTCGGCGGGACTGGATCCTGTGCACCCAACGATGTGTTCTGCTCAGTCCCCGGCGGCTGTCACTCCTGTCTTCCACCAGCAAGAGGAGTTTTAAGGAGAGCTAAGAGCAAAAATGGCGGGAGATTGCTGCGTGAGAAATTGGAAAAGATCGGGTTGAACTTACCCGCGGGGCGGCGGAAAGCTGCCAACGTCACACTGCTTACGTCCTTAGTTGAAGCGGAAGCAGTGCATTTGGCCCGCGACTTCGGCTACGTGTGTGAGACGGAGTTCCCGGCGCGCGCGCTCGCCGAGTACCTCGCGCGGCAGTACGCCGAGCACGACTCCCGGCGCAGGAGGGACCTGCTGCAGGCTACTAAACAGGTTATAAAGGAGCTAATGGACTTATTGAATCAGGACCGATCGCCGCTCTGCAATACCAGGCCCCCACACTTACTAGAGCCGGCAATACAGCGCCACCTAACACATTTCTCACTCATCTCGCATGGGTTCGGAGGTCCAGCTATAGTGGCCGCGCTCACAGCTATACAGAACTTCCTCAACGAATCACTCAAGCATTTAGACAAGTTATATCCTCAAAGCGGTATGGTGTCATCGTCGATGGACAAAACAAAAATGGACCCTGACATCAAGAAGTAA
- Protein Sequence
- MVAARGEQTTVLGNNMSWPYTMALHSTEETPNAGMDDTTGFMTDLPLLKTMKGRDGLGGTGSCAPNDVFCSVPGGCHSCLPPARGVLRRAKSKNGGRLLREKLEKIGLNLPAGRRKAANVTLLTSLVEAEAVHLARDFGYVCETEFPARALAEYLARQYAEHDSRRRRDLLQATKQVIKELMDLLNQDRSPLCNTRPPHLLEPAIQRHLTHFSLISHGFGGPAIVAALTAIQNFLNESLKHLDKLYPQSGMVSSSMDKTKMDPDIKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00905793; iTF_01151745; iTF_00785707; iTF_01030808; iTF_00709858; iTF_00776482; iTF_00770787; iTF_00621702; iTF_01204547; iTF_00667050; iTF_00446797; iTF_00449805; iTF_01451151; iTF_00383290; iTF_01028896; iTF_00784077; iTF_00933268; iTF_01075061; iTF_00288544;
- 90% Identity
- -
- 80% Identity
- -