Sexi019848.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Spodoptera exigua
Gene Symbol
Btbd3
Assembly
GCA_011316535.1
Location
CM022071.1:9448492-9452183[-]

Transcription Factor Domain

TF Family
BTB
Domain
zf-C2H2|ZBTB
PFAM
PF00651
TF Group
Zinc-Coordinating Group
Description
The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.9e-27 6.5e-25 87.8 0.0 4 109 111 217 109 218 0.94
2 2 3.2 1.1e+03 0.1 0.0 77 108 217 248 215 250 0.83

Sequence Information

Coding Sequence
ATGTTGAATTCGTGTTCTAGAAACGTTTCAAAACCTCAAAAAAGGTTACAGGACAGCATCCCTAGCATGTCCGTGGCACAAACCAACGCTTGGATGAATGCTGAGAACATCAACAATGGAGGAAGTTTGTCCTTGTCCCCGCCGCACACGGTGTCGCAGCGTGAGACTGGCACTCAGGTGTCTCAATGCTACAGTGGACCCCCGTCTCCCTGCGGTTCTACGAGTGCAACGCCTTCCCCCACGACCTCTCCGGCCCCTCCGCCTGGCGCGGCCACTTTAGACCCTAATTGGCAAGCCACTAAACCCACTGTGCGGGAGAGAAATGCAGCTATGTTCAATAATCAACTTATGTCAGATGTCACATTCATAGTTGGAGGGCCTGGCCACTCTCAGATAATACCTGCACACAAATATGTATTAGCGACTGCCAGCTCTGTATTCTATGCTATGTTCTATGGGGGATTAGCGGAATGCAAGCAAGAGATTGAAGTTCCTGACGTAGAACCATCTGCATTTCTTACACTTCTAAAGTACATTTACTGTGATGAAATCCAGCTAGAAGCAGATACAGTATTATCAACTCTATATGTtgccaaaaaatatattgttccaCATTTGGCCAAAGCTTGTGTCAATTATTTGGAAACTAGTCTCACAGCAAAGAATGCATGCTTGCTACTCAGTCAATCCCGGTTATTTGAAGAGCCTGAGCTGATGCAGAGATGCTGGGAAGTTATAGATGCCCAGgCAGAGATGGCCCTGACTTCAGATGGTTTTGTTGACATAGATGTGTCAACACTAGAATCAGTATTAGCAAGGGAAACACTCAATTGCAAGGAAATCAACTTATTTGAGGCAGCCTTAGCATGGGCACACGCTGAATGTATGCGCAGGGACATAGATCCAACACCAACAAACAAAAGAGTCATGTTGGGAGGTGCCATATACTTGATAAGATTCCCTACTATGTCATTAGAGGAGTTTGCTAACAGTGCTGCTCAGATTGGTATTTTGACCCCACAAGAGACTATtgacatatttttacattttactgcATCAAGCAAGCCACAATTGTCTTATCCAATTAAGGCGAGAGCTGGATTAAAGGCTCAGATCTGTCACAGGTTCCAGTCATGTGCCTACAGGAGCAATCAATGGAGGTATCGCGGCAGATGTGATTCCATCCAATTTTGTGTTGACAAAAGGATATTTGTTGTTGGATTTGGACTTTATGGATCCTCAAATGGAGCAGCTGACTACAACGTCAAGATTGAATTGAAACGTCTTGGTAGAGTGCTGgcagaaaataatacaaaattcttCTCGGATGGATCAAGTAACACATTCCATGTGTACTTTGAGAACCCAATACAAATTGAACCAGAATGCTTTTACACTGCTTCAGCAGTACTTGATGGAAGTGAATTAAGTTATTTTGGACAAGAAGGTTTAAGTGAAGTGTATATGGGGACAGTGACCTTCCAGTTTCATTGCTCTTCAGAGAGCACCAATGGCACAGGAGTACAAGGGGGACAAATCCCAGAACTGATCTACTATGGACCCACAGTCAACACTGCAATGGCCAACACAACTACTAATGAGGACTGA
Protein Sequence
MLNSCSRNVSKPQKRLQDSIPSMSVAQTNAWMNAENINNGGSLSLSPPHTVSQRETGTQVSQCYSGPPSPCGSTSATPSPTTSPAPPPGAATLDPNWQATKPTVRERNAAMFNNQLMSDVTFIVGGPGHSQIIPAHKYVLATASSVFYAMFYGGLAECKQEIEVPDVEPSAFLTLLKYIYCDEIQLEADTVLSTLYVAKKYIVPHLAKACVNYLETSLTAKNACLLLSQSRLFEEPELMQRCWEVIDAQAEMALTSDGFVDIDVSTLESVLARETLNCKEINLFEAALAWAHAECMRRDIDPTPTNKRVMLGGAIYLIRFPTMSLEEFANSAAQIGILTPQETIDIFLHFTASSKPQLSYPIKARAGLKAQICHRFQSCAYRSNQWRYRGRCDSIQFCVDKRIFVVGFGLYGSSNGAADYNVKIELKRLGRVLAENNTKFFSDGSSNTFHVYFENPIQIEPECFYTASAVLDGSELSYFGQEGLSEVYMGTVTFQFHCSSESTNGTGVQGGQIPELIYYGPTVNTAMANTTTNED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01363242; iTF_00786114; iTF_00000457; iTF_00405137; iTF_00425585; iTF_00906307; iTF_00831371; iTF_01362513; iTF_00018294; iTF_01368247; iTF_01153130; iTF_00040024; iTF_00302273; iTF_00951969; iTF_01026465; iTF_00037954; iTF_00810242; iTF_01340354; iTF_00177315; iTF_00758403; iTF_00038980; iTF_00124420; iTF_00907172; iTF_00036965; iTF_00041030; iTF_00237894; iTF_00042791; iTF_00147656; iTF_00928840; iTF_01094184; iTF_01030377; iTF_00745930; iTF_00041931; iTF_00112619; iTF_00071628; iTF_01063884; iTF_01095085; iTF_01230765; iTF_01117486; iTF_00374351; iTF_01093263; iTF_01527471; iTF_00273744; iTF_00364176; iTF_00924912; iTF_01247248; iTF_01441232; iTF_00007249; iTF_01062961; iTF_01416018; iTF_00851955; iTF_01192851; iTF_00120660; iTF_00122548; iTF_00809300; iTF_00043701; iTF_00274549; iTF_00772150; iTF_00908054; iTF_01084406; iTF_01119510; iTF_01532246; iTF_01533206; iTF_00111799; iTF_00123511; iTF_00301335; iTF_00888407; iTF_01339063; iTF_01535063; iTF_01027480; iTF_00446361; iTF_00685593; iTF_01062010; iTF_01085530; iTF_00636635; iTF_00667675; iTF_00973915; iTF_01029403; iTF_01335131; iTF_00300380; iTF_00622973; iTF_00712061; iTF_01440221; iTF_00375454; iTF_00726590; iTF_00952830; iTF_01031262; iTF_01526206; iTF_00445343; iTF_00447391; iTF_01118463; iTF_01251967; iTF_00850912; iTF_01064800; iTF_00681756; iTF_00682562; iTF_01028452; iTF_00683481; iTF_00050077; iTF_00449309; iTF_01534084; iTF_00121593; iTF_01260253; iTF_00173206; iTF_00622110; iTF_00968159;
90% Identity
iTF_00707109;
80% Identity
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