Sexi006631.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Spodoptera exigua
Gene Symbol
Hr39
Assembly
GCA_011316535.1
Location
CM022061.1:3039941-3057849[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 1.6 1.2e+04 -4.4 7.5 79 192 230 342 187 366 0.55
2 3 9.4e-08 0.00072 19.4 0.1 1 20 445 464 445 471 0.91
3 3 3e-62 2.3e-58 198.9 0.0 147 408 493 766 471 766 0.84

Sequence Information

Coding Sequence
ATGGTGATGAGTACCGCGATGAGCAGTGAGGGCGACGCGGTGAAGGTGGAGGGGGGACACGTGTCTGTCACCACTATCAGCATGTCGGGTCCGGAGACAAGCAACGgtCAATTCTCGTACAGTTCGAGCGGGGTGCGCATCAGTGTGTCTTCAGTGCCTCATGATGAAGACTCTACTGATGCTGAAATCTCCAAGATCGACTTCACACAACATCAGTACGAGGTTAACATGCGTAACAAGAAGAAGCGTTCATTGAGCGGTGCGCCAGAAATGTCCAGCAATGAACGAGAGCGACCTATGTCCTGGGAGGGAGAACTCTCCGACTCGGAAATGGTCATAGACACCGGTGGCAATAATGATGAGAACAGCAGTTCCCTAGACCTCCAATCGTCAAGGGATTCAATCGACACCCTTCGCAATGTCAGCATAAAGACGGAACCAGTCAAGACTGAGGGCTTCCAAGGTTTGGATGAGCAGCGTGTTCTGGATCTGAAATACCCCAGTGCCCCATTGCAGCCACACCAGCGGAGTCTTAGTATGAATAGGATATCAGTCCTCACAGATGGCTCATCCCTCTCTCTAGCCAGACGGCCGTCCTCTCCGACCAGTAGTGCGAAATCCCTCGCATTAAGTGACCAAGGGTCAGCACATATGCCACATACGGGACTCGACCAAGTACAGAACCTGACCATCAAGAAGGAAACTCAGTTATCAGaATTAAAATGCGAGCAGTCTGTGGGTATGGACAAGTTGATAGGCGCACTGCACGGCTCGCCCCTGCTCGGCCGACTGCCGCGGGTACAGTCGAGCGCCAGCACGGATTCCGCCGTACACTCCATGTatacacatagTGTATATAGCAGTCCATCAGCGAGTCCGCGCGCCTCCCGGCACTACACTCCGTCCCTCTCCCGCAACAACAGCGACGCCTCGCACTCCTCCTGCTACTCATACAGCTCGGAGTTCTCCCCAACACATTCCCCAGTACagGGTCGTCATCCACACGTAATGTATCGAGAAGCGGCGGCTGCATACGACGGTACTCATGAAGACGAACCTGATGCTCCTGAGGATAGGCTTCATCATCACCAGGGTATTAGCAGACAACAGCTTATTAACAGTCCATGCCCAATTTGTGGGGACAAGATCAGCGGTTTCCACTACGGCATATTCTCCTGCGAATCGTGCAAGGGTTTCTTCAAGCGAACAGTTCAGAACCGCAAGAACTACATGTGTCTCCGGGGTGGAAACTGTCCCGTCACCGTCACCACCAGGAAGAAGTGTCCAGCTTGCAGATTCGATAAGTGTTTGGGATGCGGCATGAAACTTGAAGCAATCCGCGAGGACCGCACGCGCGGCGGTCGGTCGACGTACCAGTGCTCGTACTCGCTGTCGGGCGCCGCCAGCACGGGCTCGCTGCtcgctgcgcacgcgccgcctACGCTGCGACACGCCTCCAGCCTCACCAGCGTTAACGGCCCCGGTTCATACAGCAGCCGAGGCGAGTCTAGCAACAGCCAAGTGACGCCAGATATACCGCCGTTATTGCAGGAAATAATGGACGTGGAACATCTCTGGCAGTACAATGAATCTGAGCTAAGTAGACTTGGCAAGTCGACGGGCGGTAGTCCGTCCGCCAACCCCCTTTTGGCGGCCAGCGGGATCACGGCGCATAACTCGAGCCCCGACTTCTTGGCAGACCTCTGCAACATCGCCGACCATCGCCTCTACAAGATCGTCAAATGGTGTAAAAGCTTACCACTATTTAAGAATATTTCGatcgACGATCAGATTTGCCTGTTGATAAACAGTTGGTGTGAGCTTTTGGTACTGTCGTGTTGCTACCGCGGCGTCAGTACGCCCGGCGAGGTCCGCGTCGGAGGCGGGAGGGgaagtaataaaatgtttgaaaattcaTCCAGGTTGGGTCTAACGCCTTGCATTGAGCGCATGCTGAGTTTCACCGACCATCTCAGGCGGCTGCGGGTCGACCGGTACGAGTATGTCGCGCTCAAAGTCATCGTTCTACTCACTTCAGATGCTCCAGATTTGCGTGAAGTGGAGAAAGTCCGAGCGTCCCAAGAGAAAGCGCTGGCCGCTTTGCAAGCATACATCGCGACACACTCGCCCGGCACGCCCGCCAAGTTTGGAGAGCTATTGCTACGTATACCTGAACTGCAAAGGACTTGCCAGTTCTTTATGCAAGTCGGTAAAGAAATGCTGAATCCGGCCAACAAGAGTAAAGATGGTGATGGACCAAGTTTCAATCTGCTCATGGAACTGCTACGCGGCGACCATTGA
Protein Sequence
MVMSTAMSSEGDAVKVEGGHVSVTTISMSGPETSNGQFSYSSSGVRISVSSVPHDEDSTDAEISKIDFTQHQYEVNMRNKKKRSLSGAPEMSSNERERPMSWEGELSDSEMVIDTGGNNDENSSSLDLQSSRDSIDTLRNVSIKTEPVKTEGFQGLDEQRVLDLKYPSAPLQPHQRSLSMNRISVLTDGSSLSLARRPSSPTSSAKSLALSDQGSAHMPHTGLDQVQNLTIKKETQLSELKCEQSVGMDKLIGALHGSPLLGRLPRVQSSASTDSAVHSMYTHSVYSSPSASPRASRHYTPSLSRNNSDASHSSCYSYSSEFSPTHSPVQGRHPHVMYREAAAAYDGTHEDEPDAPEDRLHHHQGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYMCLRGGNCPVTVTTRKKCPACRFDKCLGCGMKLEAIREDRTRGGRSTYQCSYSLSGAASTGSLLAAHAPPTLRHASSLTSVNGPGSYSSRGESSNSQVTPDIPPLLQEIMDVEHLWQYNESELSRLGKSTGGSPSANPLLAASGITAHNSSPDFLADLCNIADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLVLSCCYRGVSTPGEVRVGGGRGSNKMFENSSRLGLTPCIERMLSFTDHLRRLRVDRYEYVALKVIVLLTSDAPDLREVEKVRASQEKALAALQAYIATHSPGTPAKFGELLLRIPELQRTCQFFMQVGKEMLNPANKSKDGDGPSFNLLMELLRGDH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00042698;
90% Identity
iTF_01076559;
80% Identity
iTF_01361753;