Basic Information

Insect: Spodoptera exigua
Gene Symbol: clz9
Assembly: GCA_011316535.1
Location: CM022077.1:2008751-2011225[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.5e-09 5.7e-07 29.5 0.0 4 38 13 47 11 50 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.5e-09	5.7e-07	29.5	0.0	4	38	13	47	11	50	0.94

Sequence Information

Coding Sequence: ATGGAGCCGCAGAAGCGCAAGCAGTACGCCTCTGCTCAACTAGAAGCTGCGCTTCTAGCTATAAATGAAGGTACCAGCATATACGAAGCTTCAAAAACCTATGGCATACCGAGGACAACTCTGCGTGACaagagaaataataaatatataaatgaacattgtggaaaacaaacagttttaacGAAGGAGGAAGAAAAAAGACTGGTAGACTGGATTTTTTATCTCGGGAAGTCAGGTTTTCCTGTAACTAAGGATCAATTGTTGGAAACAGTAGCAAAATTGGTGGAAAACTTAAATCGCTCTAATCCTTTTAAAGATGGTGTTCCCGGAAAAGGATGGTTTCTTAAGTTTATGGCGAGGCATCCTACCATTTCAAGGCGAATTACTCAGAATTTGCCTACAAGCCGTTCACATATTACAGAGGAAGCTGTAAGAGCATGGTTCAATCGAGTACATagttattttgaacaaaataaccTTCTTGATGTTTTGGAAGATCCTAGTCGGATTTTTAATTGTGATGAGACCGGATTCTTTTTGTGTCCGAAAGGAAAACAAGTTCTTGTCCGAAGAGGCAGCAAGAAAGTATATAGTAGAGTGGCCAATGACGAAAAGGAGTGTTTAACAGTGCTAGTAAATGTGTCTGCAGATGCTGCAATAGCACCTCCCATGGTCTTATATCCATACAAGCGTTTACCAAAAAACATTGTTCCAACTGTACCATCTGGATGGGGTATCGGTCACACTGAGTCAGGATGGATGAATATGGCCGCATTTTATGAGTACGTTGCCAATTGCTTTTATCCCTGGCTGATTCAGCATAACATACAATTTCCTGTAGCTTTTTTTCTCGACGGTCACACTTCTCATATATCACTCCCTCTGACAGTTTTTTGCAAAGAAAAGGGAATAATCCTAATAGCATTATTACCTAATGCAACGCATGTTCTTCAACCCTTAGACGTTTCTGTATTCAGACCCGTGAAAGGAACTTGGAGAACCGTTGTTCATGATTTTAGAGTTCAAAACAACTTTGCAAAATTAAGACGAATAGATTTTGCACCTCAAGTGGATATTTGCTTAAAAAAGACTCTTGTATCACAAACAATTAAGAATGGATTCCAATGTTGTGGATTATATCCCTTTGGACCTGATAATGTAAATTATGATAAACTTTTGACAAAAAACGCTAATGCAACAAGTGAAGAAAGTGGAGACAATGCAGATGATATTAGTAGCCATGGATCGAGTACTGTTACAGGCAATGAGAAATCTGTCGACGATACAGAAAAGTTTAAACAGCAGTTTGAACGTCGCTTATCACCTGAAGTTCTCCTAATGTTCCAAAAATCGGGATCGGTATGGAATGGCGATGAGACttacaaaaaattatttgaGTTTTGGAGGGATATTAATCCTATCGACAATACACCTTTACAACAAACTTTCGATAACAATTTAGAATTGGGTGATACCACGCTTGTCAACAATATTGGTGAAGAAGAGACGTTGACTTATGAAGTCAGTGCAAGTGGATGTCTTGTTCCAAACCGTTTTAATACCGtttctaataatgttttaatgtttccCATGGACGAATTGCTATCTCCAATTATATCTAAAGAATCGGATACCATATCTTTATTGAGCACTCAGCCTGAATCGAATCTTTTGGAATATGTTAATGAGATACCCCCCAAAACAATTACTCCTTCAACTGATTGCGTCAAAGAGTTAAACAGTGAAGATCACAATGCAAGAACATCAACTCCTAAACAATCCAATAAAAACCATAGTGATGAACCTATGCTACTACTGAATAAAAGTCATAGTGACGACACATTGTTCACTACAGTTAATAATGAAACGCCATGTAAGTCAATCCAAAATTCTAGTCATTCAAGGTTTATACCAAAAGAGCTCAATCTTACAACTCCTTTTAAAAATGCTCTATTCTTTCCTAAAGTTGAcactaaatcaaataaaagagtTTCCAAAAAAATTACACCAACTGTTGCAATATCAGATGAGTTCATGGAATACCAGAAAAAAGCAGAAGAGAAAAAAGCACaggaagaagaaaagaaaaaaatacggaaagaaaaattacaaagaaataaaatagaaagagaAAAGAAACAAGCAGATCTTAGGAAGGCAAAAGAAAGGAAAAATATGGGAGCTGTGTCTAAACCAACAAGTGTGAGAAAACATAATACATCAAAAGCGTTGGAAATACGTCGTAATACGACGTCAAGTTCAGAATCTGAATCTGACTCAGTATTAATCCCacgacaaaataattacaaagtgAAAACTAAAAATGCAATACATTCAGGTTATGCTTCAACATCAGCTAGAGTTCTTCCAAATACATCATCATCTGATAATGATGAGTTACATGTACCAAAAACTGTTTCGTATAAACgacatattatttttccatCTGACTCTGAatctgataatattttttaa
Protein Sequence: MEPQKRKQYASAQLEAALLAINEGTSIYEASKTYGIPRTTLRDKRNNKYINEHCGKQTVLTKEEEKRLVDWIFYLGKSGFPVTKDQLLETVAKLVENLNRSNPFKDGVPGKGWFLKFMARHPTISRRITQNLPTSRSHITEEAVRAWFNRVHSYFEQNNLLDVLEDPSRIFNCDETGFFLCPKGKQVLVRRGSKKVYSRVANDEKECLTVLVNVSADAAIAPPMVLYPYKRLPKNIVPTVPSGWGIGHTESGWMNMAAFYEYVANCFYPWLIQHNIQFPVAFFLDGHTSHISLPLTVFCKEKGIILIALLPNATHVLQPLDVSVFRPVKGTWRTVVHDFRVQNNFAKLRRIDFAPQVDICLKKTLVSQTIKNGFQCCGLYPFGPDNVNYDKLLTKNANATSEESGDNADDISSHGSSTVTGNEKSVDDTEKFKQQFERRLSPEVLLMFQKSGSVWNGDETYKKLFEFWRDINPIDNTPLQQTFDNNLELGDTTLVNNIGEEETLTYEVSASGCLVPNRFNTVSNNVLMFPMDELLSPIISKESDTISLLSTQPESNLLEYVNEIPPKTITPSTDCVKELNSEDHNARTSTPKQSNKNHSDEPMLLLNKSHSDDTLFTTVNNETPCKSIQNSSHSRFIPKELNLTTPFKNALFFPKVDTKSNKRVSKKITPTVAISDEFMEYQKKAEEKKAQEEEKKKIRKEKLQRNKIEREKKQADLRKAKERKNMGAVSKPTSVRKHNTSKALEIRRNTTSSSESESDSVLIPRQNNYKVKTKNAIHSGYASTSARVLPNTSSSDNDELHVPKTVSYKRHIIFPSDSESDNIF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00667348;
90% Identity: iTF_00951744;
80% Identity: iTF_01361534;