Basic Information

Gene Symbol
Mblk-1
Assembly
GCA_905220595.1
Location
HG992296.1:11431993-11457933[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.4e-11 2e-08 34.8 0.0 1 36 146 182 146 186 0.93
2 2 1e-18 1.5e-15 57.6 0.0 1 43 352 395 352 397 0.95

Sequence Information

Coding Sequence
ATGACCCTTATCAAGAGTCCAGCGTCGGAGTCGGACAGCAGTTCAGTGTCGGGTGCCAAATCCCCGGCCTCTGCGCCTCCGTTACTACAGCATTTGCTGCAGCTGCAGGCACAGAATCCTCAAACTTTAGCACAGTTCCAGCAGATGATAGCGGCCCTGGCGGCGTTGGGGAGCGGGCTGGTGCCCGCGCCTCCACTTTCTCAGGCTTGGATGATGCAGAGGATCGTGCAGAGACCGCAAACGGATAGGCTACCAGAAGTGGGTGAAAAGGCACCAGCGTCTTCGTCTCCGAATCAAGCTGAACAGCCCCTGGATCTCAGCAATAAGTCCACCTCCAGCACAAGCGGGACTCCACCACCCGATGCTAAGCTCTTTGATAACAGATTGAAGCGAACGGCTCTGGAAGCTAGTAACAGCGGCGTGCGGCGAGCCTACACCGAGGAAGAGCTATTGTCGGCAGTGCGCGACATTCAAGCTGGCCGACTCGGCACCCGCCGTGCGGCTCTTCTCTATAATATTCCTCGCTCAACTCTACGcaacaaactaaataaatttggtGCCAACCCAGAACCCGTCGACTCTGAACCAGACAGCGATGACCGGGCTGATTCTCCGCCTTCAGTCATACTTAAAATTCCAACGTTTCCGCCTCCAGATGAAAAGAGCCCTTCGCCAGCTGGGGTGCCCATAGGGTGCGCGACTAGTATGACTCCTGTCACACCGGTCGGGCCGCCACCTCAGCAACCGCTGCTTCTCCCGCACTCCGTCTTTGCCGATGCACCTTCCACACAACATCTCTTCACTTCTCTTAGTGACGTCATCGCTAAAAGCATCAGTCAGAAATTCCAACAACCGCTGGATCGATCTCACCATCAACCCGGTGAACTACCTTTCATGAGTGCGACTAATCGTCACGTGTCAGTTATAAAGACTCCGCCTGAGAATCAACGCTATCCCGCACCAGGAAATTCTAAAGCTATCCCAAACAATAACGGACAACCTGCGGCCGGCGGGAAGGGCACGCGTCCGAAGCGCGGCAAGTATCGCAACTATGACCGCGACAGTCTCGTAGAAGCTGTAAAAGCAGTTCAACGCGGAGAAATGTCCGTGCACCGAGCCGGCTCCTACTACGGTGTGCCGCACTCCACGCTCGAGTATAAAGTGAAAGAACGCCACCTGATGCGTCCAAGAAAACGCGAGCCGAAACCACCGCAAGATATCAAGCCGCAACCACCAAAGCCGCCGCCACCCAAACCGCCGACGAAACCGTTCTCCAACGGAATGAACGGACCAGAAACTGCGGGATATCCACCCGGATACCCCTTCTGGGGCGGGGCAGGGTTTGCACCACCGCCTACCCCTGACCTGTACGCCTCGCACATGATGAGGAGACTTCGAGAAGAGGCACCGCCGCCAGCTAACGGATCATTCCTTGAAGGAATAATCAGGTCCAGCCTCGAACGGCCTGCGTTGCTACAGCGGCTCACCGGCGAGCCGCGCGTACCCGGAGAAGCCACGCCGGGACTGCTGAGACGGTTGACGGGCGAGGACGAGCCGCCGGCGCGGCGACAGCGCCTCGACAGCTCGGACCAGGCGCTAGCCGCGGAGATGCGCGAGGCCGTGCAGCGGCTGCGCGCCGATAAGCTGCGGCCGCGGAACGGCACGCCCACGCCGCCGCCGGGAGCAGGCCCGGCGCTGGCGGGGCTGGGCCCGGCGCTGGCCGGCGCGGGCCCGCCGCCGCTGCCCGCCGCGTCGCCCGCGCCGGCGCCCCCCGCCGCTCCGCCCGACCGCGCCTAG
Protein Sequence
MTLIKSPASESDSSSVSGAKSPASAPPLLQHLLQLQAQNPQTLAQFQQMIAALAALGSGLVPAPPLSQAWMMQRIVQRPQTDRLPEVGEKAPASSSPNQAEQPLDLSNKSTSSTSGTPPPDAKLFDNRLKRTALEASNSGVRRAYTEEELLSAVRDIQAGRLGTRRAALLYNIPRSTLRNKLNKFGANPEPVDSEPDSDDRADSPPSVILKIPTFPPPDEKSPSPAGVPIGCATSMTPVTPVGPPPQQPLLLPHSVFADAPSTQHLFTSLSDVIAKSISQKFQQPLDRSHHQPGELPFMSATNRHVSVIKTPPENQRYPAPGNSKAIPNNNGQPAAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDIKPQPPKPPPPKPPTKPFSNGMNGPETAGYPPGYPFWGGAGFAPPPTPDLYASHMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLTGEPRVPGEATPGLLRRLTGEDEPPARRQRLDSSDQALAAEMREAVQRLRADKLRPRNGTPTPPPGAGPALAGLGPALAGAGPPPLPAASPAPAPPAAPPDRA*

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2