Cmes008686.1
Basic Information
- Insect
- Cybosia mesomella
- Gene Symbol
- Mblk-1
- Assembly
- GCA_946251875.1
- Location
- CAMIUH010000246.1:25226-55078[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-10 3.6e-08 34.9 0.0 1 36 160 196 160 200 0.93 2 2 1.1e-17 3.2e-15 57.5 0.0 1 43 365 408 365 410 0.95
Sequence Information
- Coding Sequence
- ATGATTATGATCATAAACAATTTTCCCCGAGTTTACATCACAGTTGATTTTCCGAGTCCAGCGTCGGAGTCAGACAGCAGTTCGGTGTCCGGCGCCAAGTCCCCGGCCTCAGCGCCACCACTGCTGCAACACCTGCTACAGCTGCAGGCGCAAAGCCCTCAAACCATAGCCCAGTTCCAGCAGATGATCGCGGCGCTGGCGGCGCTGGGCAGCGGACTGGTGCCGGCGCCTCCACCCCTCTCGCAAGCCTGGATGATGCAGAGGATCGTGCACAGACAGCAAGCGGATCGGCTACCAGAATTGGGTGAGAAGGTGCTGGCGTCTTCGTCTCCCAACCAAGCGGAACAGCCCCTGGATCTCAGCAACAAGTCCACCTCCAGCACCAGTGGGACGCCACCTCCTGAGGGAAAGCTCTTTGATAACAGATTGAAACGCTCAGCTCTCGAGGCAAGTAACAGTGGAATGCGGCGGACCTACACCGAGGATGAGCTGTTGTCGGCGGTGCGGGACATCCAAGCTGGCCGGCTCGGCACTCGTCGCGCTGCCCTTCTTTATAACATCCCGCGCTCGACTCTACGCAACAAGCTCAACAAATTCGGTGCCAACCCAGATCCCGTAGACTCGGAACCAGACAGCGACGACAGGGCCGATTCTCCACCTTCAGTCATCCTTAAGATTCCAACGTTTCCGCCGCCAGATGAAAAGAGCCCTTCTCCGGCTTCTGTGCCAATGTGCGCCACCACTATCACTCCAGTCACACCGGTTGGACCGCCGCCGCAGCAACCACTGCTACTTCCGCACTCTATGTTCGCTGACCCACCTTCCACGCAACATCTCTTCACCTCCCTCAGTGATGTCATCGCTAAAAGTATCAGCCAGAAATTCCAGCAACCGCTTGACAGGTCACACCATCAACCCGGTGATCTACCTTTCATGCGCGCGCCTGATCGTCACGTCTCAGTAATAAAAACCCCGCCAGACAATCAACGCTATCCCGCACCCGGAAATTCTAAAGCTATGCCCAACAATAACGGACAACCCGCCACTGGAGGTAAAGGTACGCGGCCAAAACGTGGCAAGTATCGTAACTATGATAGAGACAGTCTAGTAGAAGCTGTGAAAGCGGTTCAACGTGGAGAAATGTCTGTACACCGAGCTGGATCTTACTATGGTGTGCCGCACTCTACGCTCGAGTATAAAGTTAAAGAACGCCATCTCATGCGCCCTAGAAAACGCGAGCCCAAACCGCCTCAAGACACGAAGCCTCAACCACCGAAGCCTATACCACCCAAACCGCCACTAAAACCGTTCTCCAACGGAATGAACGGACCGGAGTCTACGGGATTTCCAGCCGGTTATCCCTACTGGGGCGGCGGTGGCTTCGCACCCCCGCCCGCACCCGATCTGTACGCCTCGCAGATGATGCGACGGCTCCGAGAAGAAGCGCCGCCCCCGGCTAACGGGTCATTCCTCGAAGGAATAATCAGATCCAGCCTAGAGCGGCCTGCGTTGCTGCAGCGGCTCACTGGTGAGTCGCGAGTACCTGGAGAGGCCACGCCTGGGCTTTTGAGGCGATTGACGGGAGAGGACGAGCCGCCGgcgaggcggcagcgcctcgaCAGCTCGGACCAGGCGCTGGCCGCCGATATGCGCGAAGCTGTACAACGGCTACGCGCCGACAAGCTGCGCCCGCGGAACGGCACGCCCACGCCACCACCCGGCACGGGCCcggcgctggccggcgcgggccCGGCGCTGGCCGGCTTGGGCCCGGTGCTGGCCGGTGTTGGCGCTGCGATGGCTGGCGTGGGCCCCCCACTCCCCGCCGCGTCGCCGGCGCCGGCGCCCCCCGCCGCTCCTCCTGACCGCGCCTAG
- Protein Sequence
- MIMIINNFPRVYITVDFPSPASESDSSSVSGAKSPASAPPLLQHLLQLQAQSPQTIAQFQQMIAALAALGSGLVPAPPPLSQAWMMQRIVHRQQADRLPELGEKVLASSSPNQAEQPLDLSNKSTSSTSGTPPPEGKLFDNRLKRSALEASNSGMRRTYTEDELLSAVRDIQAGRLGTRRAALLYNIPRSTLRNKLNKFGANPDPVDSEPDSDDRADSPPSVILKIPTFPPPDEKSPSPASVPMCATTITPVTPVGPPPQQPLLLPHSMFADPPSTQHLFTSLSDVIAKSISQKFQQPLDRSHHQPGDLPFMRAPDRHVSVIKTPPDNQRYPAPGNSKAMPNNNGQPATGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPPQDTKPQPPKPIPPKPPLKPFSNGMNGPESTGFPAGYPYWGGGGFAPPPAPDLYASQMMRRLREEAPPPANGSFLEGIIRSSLERPALLQRLTGESRVPGEATPGLLRRLTGEDEPPARRQRLDSSDQALAADMREAVQRLRADKLRPRNGTPTPPPGTGPALAGAGPALAGLGPVLAGVGAAMAGVGPPLPAASPAPAPPAAPPDRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00821701;
- 90% Identity
- iTF_01360541;
- 80% Identity
- -