Ssim024046.1
Basic Information
- Insect
- Spicauda simplicius
- Gene Symbol
- nfxl1
- Assembly
- GCA_949699795.1
- Location
- OX453080.1:13737255-13739732[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 19 1 3.1e+04 -7.8 5.6 15 19 134 138 133 138 0.81 2 19 0.0052 1.6e+02 3.2 0.3 4 10 169 175 168 176 0.97 3 19 1.6e-07 0.0048 17.6 15.9 3 19 186 202 185 202 0.95 4 19 2.6e-09 8.2e-05 23.3 12.8 3 19 239 255 237 255 0.91 5 19 1 3.1e+04 -4.1 2.5 6 10 280 284 279 284 0.88 6 19 5.9e-10 1.8e-05 25.4 13.4 1 19 290 308 290 308 0.99 7 19 8.1e-07 0.025 15.4 18.3 3 19 345 361 344 361 0.93 8 19 0.0016 51 4.8 17.9 3 18 397 412 395 413 0.91 9 19 3.9e-08 0.0012 19.6 18.5 1 18 422 439 422 440 0.98 10 19 6.6e-05 2 9.3 4.3 9 19 488 498 486 498 0.91 11 19 0.014 4.5e+02 1.8 7.9 3 12 509 518 508 518 0.90 12 19 0.16 4.8e+03 -1.5 3.5 14 18 547 551 547 552 0.87 13 19 0.1 3.1e+03 -0.9 0.1 8 12 568 572 567 573 0.82 14 19 8.9e-06 0.27 12.0 4.6 1 12 588 599 588 601 0.92 15 19 0.78 2.4e+04 -3.8 1.7 15 18 613 616 613 617 0.87 16 19 0.00035 11 6.9 16.1 4 18 630 645 628 646 0.81 17 19 1 3.1e+04 -5.1 2.4 9 13 652 656 651 656 0.74 18 19 0.066 2.1e+03 -0.3 1.0 9 16 675 682 673 683 0.86 19 19 2.2e-07 0.0068 17.2 10.5 1 16 687 701 687 707 0.87
Sequence Information
- Coding Sequence
- atgtctcGAAAATACAGAGATGCGGCTGCGAAATTGCAGCAAAGTGTGCAAAAACATCTTAACCAAATTAAGGATGTCTCTTCCTCTGAGGATGAGGAGCCCTACGAGGCTAGCGTGCTGGAGGGGGTGTTCCAGAGCTACTGGAGAGGCGGAGGGGACACTCAGCTGCTGAACAGAACCAAGAACCTTCTAGAAGAAGCGATTAGCGGCCGATCTGTAACGTGTCTAATTTGTATTGGCTCGATCAAACGCGCGGACGCTATTTGGACGTGTGACCATTGTTTCTGCTACTTTCACCTTTTTTGCATTCAGAAATGGGCAAACGACAGCATAAGCCTGTTAACGGGGGAAAGCCACGGCCCCATAGCTGTGGTCGGGCCGAAGAAGATTGAATGGTGTTGTCCTAAATGTCGGCAGGCGTATCTTAAGGAGGAAATACCGCAGCGGTATCGCTGTCTCTGCGGGAAGACTGAAGACCCTCCGTTCCATCCTTGGTTGATACCACACACATGTGGGGAGGTGTGTGGTAAGAGGCTCTCAACAGGGGACCATTGCAAACACAAGTGTCTTCTACTCTGCCACCCAGGGCCATGTCCTCCTTGTCCACAAACCGTAAACGGAATCTGTTACTGTCAAAAAGAATCCAAGAGAGTAAGATGTAGTGCCGCTAAATGGTCCTGTGGCCAACAGTGCAAGAAACTGCTCCTGTGCAAGTCGCATACATGTGAGAACTTATGCCATGATGGTGACTGCCCGCCTTGCACCTACACCAGCTTGCAATCCTGTCAGTGTGGAGCCGAGGCAGTAAAGAGACCGTGCGATGACCACAAATGGCAATGCCAAAAGAAATGTAACAAAACATACTCCTGTGGTTAccataaatgtgaaaaaatatgtcattcGGGAGACTGTGGCCAGTGCCCCAACTCAGGCATGGTGTCTTGCCCGTGTGGTGCTAATCAGAGATATGTTGAATGCCCGGACATCATAGAAACATGTGTAAGTACTTGCAACAAAAAACATGAAGACTGTGAGCACAGCTGCCCTGAGAAGTGCCACAAGGGACCCTGTCCGCCCTGTCAGGTTGTGGTTGATAAGGAGTGCCACTGTTTAACACACATCAAACCCCTGCCATGCTCCAAGGACTTCAGGTGCGACACCAAATGTAGAGGAATCAGGGCCTGTAGAAAACATGGTTGTGGACGTAAGTGTTGTAATGGCAACTGTCCTCCATGTGAGAAAGTATGTGACAAACCTTTGCAATGCGGACGCCATAAGTGTACCAACATCTGCCACCACGGCCCATGCTATCCTTGCCACCGTGAGTCAAAAATAACCTGCCGTTGTAAGCAGACATACGTCACCGTACCATGCGGTAGGGAGAAGCACACAAAGCCTCCAAGATGCAGCCTCCCTTGCAAGCTAAAATACAAGTGTGGTCACATAGAGGAAAACCGACACACATGCCATTTTGGTGATTGTCCGTCATGTAAAGCTATTTGCCAGAAACCCTACCCCAAATGTGAACACAATTGCAAAGCAACCTGCCATGAATATGTTGCTGTTGTTTTTAAGCAGGTGGAAAAGCCTGCAACACCATGGGACATTCAGCCTCCGAAGACCAAGATAATGACATTAGACTGTCCCCCATGTGAGACTCCTGTACCCATCTCATGTTTCGGTGATCATGAAGTTGAGAATCAGCCCTGTCACTCCGCAACTCGGCGACCCTGTGGCAGGAATTGTGGCAAACCGTTAGCTTGTGGCAACCACCAATGTACAATGCTTTGCCATTTACAGAATTATGATGCTAAATACCCAAATGTGCCGTATGTATGCAAGCCATGCAATAGAGAGTGCATGGTTCCCCGACCAGAGAGATGTGCCCATAAATGTCCGAAGCGGGAGTGTCATCCGGGTTCCTGTCCCCCTTGTGAAATCCTAGAAAGAGTTCCATGTCATTGCGGGATAAGTGAACTATACTTGCGTTGTCGAGAGCTTTCATCAGCTACACAGGAAATGTTATGTTGCAACCAACAATGTCCGCGGAACTTGGCATGTGGGCATCGATGCAGGAACATCTGTCATCCTGGCCCTTGTGATGAGAATCAAGTCTGTCTTAAGAAAACCAAGGTATATTGCCCCTGCGGAAATATCAAGAAAGAGGCACTGTGTAAATCTGTTCGGAACGCAGAGGTCAACATTACCTGTGATGGGACCTGTGAAGCTAAGCAACGGGCAGCAAAATTAGAGAAAGAGAAAGAAGAGCAGAGATTGAAAGAGTTGGAAGAGGAGAAAAATCGGAGAGAACTAGCAGAGTATGAGTGGAAGTTGAGTGGCAAAAAgaagaaatataaagaaaagaagGTAGTAGTTAATAAGGATGATAGAAGTTTGTTGAAGAGGTATTGGGTTCCTATATTATCTCTATTAATTGTTATACCAGctgcattttattacattttatatataaattga
- Protein Sequence
- MSRKYRDAAAKLQQSVQKHLNQIKDVSSSEDEEPYEASVLEGVFQSYWRGGGDTQLLNRTKNLLEEAISGRSVTCLICIGSIKRADAIWTCDHCFCYFHLFCIQKWANDSISLLTGESHGPIAVVGPKKIEWCCPKCRQAYLKEEIPQRYRCLCGKTEDPPFHPWLIPHTCGEVCGKRLSTGDHCKHKCLLLCHPGPCPPCPQTVNGICYCQKESKRVRCSAAKWSCGQQCKKLLLCKSHTCENLCHDGDCPPCTYTSLQSCQCGAEAVKRPCDDHKWQCQKKCNKTYSCGYHKCEKICHSGDCGQCPNSGMVSCPCGANQRYVECPDIIETCVSTCNKKHEDCEHSCPEKCHKGPCPPCQVVVDKECHCLTHIKPLPCSKDFRCDTKCRGIRACRKHGCGRKCCNGNCPPCEKVCDKPLQCGRHKCTNICHHGPCYPCHRESKITCRCKQTYVTVPCGREKHTKPPRCSLPCKLKYKCGHIEENRHTCHFGDCPSCKAICQKPYPKCEHNCKATCHEYVAVVFKQVEKPATPWDIQPPKTKIMTLDCPPCETPVPISCFGDHEVENQPCHSATRRPCGRNCGKPLACGNHQCTMLCHLQNYDAKYPNVPYVCKPCNRECMVPRPERCAHKCPKRECHPGSCPPCEILERVPCHCGISELYLRCRELSSATQEMLCCNQQCPRNLACGHRCRNICHPGPCDENQVCLKKTKVYCPCGNIKKEALCKSVRNAEVNITCDGTCEAKQRAAKLEKEKEEQRLKELEEEKNRRELAEYEWKLSGKKKKYKEKKVVVNKDDRSLLKRYWVPILSLLIVIPAAFYYILYIN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00167395;
- 90% Identity
- iTF_00288543;
- 80% Identity
- -