Basic Information

Insect: Spicauda simplicius
Gene Symbol: -
Assembly: GCA_949699795.1
Location: OX453087.1:3643991-3647551[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 6.7 6.1e+02 2.0 0.0 3 23 2 23 1 23 0.89

2 30 0.11 10 7.6 0.8 1 23 43 66 43 66 0.96

3 30 0.0035 0.31 12.3 1.6 1 23 72 95 72 95 0.96

4 30 0.039 3.5 9.0 2.0 1 23 99 122 99 122 0.93

5 30 0.042 3.8 8.9 0.6 2 23 125 147 125 147 0.94

6 30 0.23 21 6.6 0.1 2 20 153 171 152 173 0.91

7 30 0.0034 0.31 12.3 2.1 1 23 227 250 227 250 0.97

8 30 3.5 3.2e+02 2.9 0.1 3 23 279 300 277 300 0.93

9 30 0.00044 0.04 15.1 0.2 1 23 322 345 322 345 0.92

10 30 5.3e-05 0.0048 18.0 2.3 2 23 351 372 350 373 0.94

11 30 1.4 1.3e+02 4.1 4.8 1 23 378 401 378 401 0.95

12 30 0.034 3.1 9.2 0.2 2 23 407 429 406 429 0.94

13 30 0.0034 0.31 12.4 2.4 1 23 433 456 433 456 0.95

14 30 4.8 4.4e+02 2.4 2.1 2 23 463 484 462 484 0.94

15 30 1.8 1.6e+02 3.8 0.9 1 10 490 499 490 503 0.95

16 30 0.018 1.6 10.1 0.2 1 23 541 563 541 563 0.95

17 30 0.036 3.3 9.1 0.3 2 23 591 613 590 613 0.91

18 30 0.086 7.9 7.9 0.8 2 23 634 656 633 656 0.95

19 30 0.0012 0.11 13.8 1.7 1 23 661 683 661 684 0.96

20 30 0.15 14 7.1 3.0 1 23 688 711 688 711 0.90

21 30 0.02 1.8 9.9 2.8 2 23 714 736 713 736 0.94

22 30 7.8 7.1e+02 1.8 0.5 2 20 742 760 741 762 0.91

23 30 0.0047 0.43 11.9 5.5 1 23 811 834 811 834 0.96

24 30 0.00094 0.086 14.1 0.3 1 23 906 929 906 929 0.92

25 30 5.4e-07 4.9e-05 24.3 0.3 1 23 934 957 934 957 0.97

26 30 0.00033 0.03 15.5 4.6 1 23 962 985 962 985 0.94

27 30 0.0018 0.16 13.2 0.5 2 23 991 1013 990 1013 0.93

28 30 4.3e-05 0.0039 18.3 3.3 1 23 1017 1040 1017 1040 0.97

29 30 0.2 18 6.8 0.3 2 23 1047 1068 1046 1068 0.96

30 30 0.043 4 8.9 1.5 1 23 1074 1096 1074 1096 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	6.7	6.1e+02	2.0	0.0	3	23	2	23	1	23	0.89
2	30	0.11	10	7.6	0.8	1	23	43	66	43	66	0.96
3	30	0.0035	0.31	12.3	1.6	1	23	72	95	72	95	0.96
4	30	0.039	3.5	9.0	2.0	1	23	99	122	99	122	0.93
5	30	0.042	3.8	8.9	0.6	2	23	125	147	125	147	0.94
6	30	0.23	21	6.6	0.1	2	20	153	171	152	173	0.91
7	30	0.0034	0.31	12.3	2.1	1	23	227	250	227	250	0.97
8	30	3.5	3.2e+02	2.9	0.1	3	23	279	300	277	300	0.93
9	30	0.00044	0.04	15.1	0.2	1	23	322	345	322	345	0.92
10	30	5.3e-05	0.0048	18.0	2.3	2	23	351	372	350	373	0.94
11	30	1.4	1.3e+02	4.1	4.8	1	23	378	401	378	401	0.95
12	30	0.034	3.1	9.2	0.2	2	23	407	429	406	429	0.94
13	30	0.0034	0.31	12.4	2.4	1	23	433	456	433	456	0.95
14	30	4.8	4.4e+02	2.4	2.1	2	23	463	484	462	484	0.94
15	30	1.8	1.6e+02	3.8	0.9	1	10	490	499	490	503	0.95
16	30	0.018	1.6	10.1	0.2	1	23	541	563	541	563	0.95
17	30	0.036	3.3	9.1	0.3	2	23	591	613	590	613	0.91
18	30	0.086	7.9	7.9	0.8	2	23	634	656	633	656	0.95
19	30	0.0012	0.11	13.8	1.7	1	23	661	683	661	684	0.96
20	30	0.15	14	7.1	3.0	1	23	688	711	688	711	0.90
21	30	0.02	1.8	9.9	2.8	2	23	714	736	713	736	0.94
22	30	7.8	7.1e+02	1.8	0.5	2	20	742	760	741	762	0.91
23	30	0.0047	0.43	11.9	5.5	1	23	811	834	811	834	0.96
24	30	0.00094	0.086	14.1	0.3	1	23	906	929	906	929	0.92
25	30	5.4e-07	4.9e-05	24.3	0.3	1	23	934	957	934	957	0.97
26	30	0.00033	0.03	15.5	4.6	1	23	962	985	962	985	0.94
27	30	0.0018	0.16	13.2	0.5	2	23	991	1013	990	1013	0.93
28	30	4.3e-05	0.0039	18.3	3.3	1	23	1017	1040	1017	1040	0.97
29	30	0.2	18	6.8	0.3	2	23	1047	1068	1046	1068	0.96
30	30	0.043	4	8.9	1.5	1	23	1074	1096	1074	1096	0.96

Sequence Information

Coding Sequence: ATGTGTGAAATATGTGAGGAGAGTAAAGTTAATTTCGACGAGTTGGTCACACATTTGATCGACGAACACAATTTGTTGTACGACAAAGAAGTAAAGCTGGTGATAATGAAATATGAATTGGAAAATTTCAAATGTGTGTTGTGTGATCAGAAATGTGACAATCTCATCGCATTGTTGACTCACGTTAGCAAAGATCATGAGACGATTAAGCCGTATTCCTGTTCAGAATGTAGACAAAAGTTCAATAAAAAGTGGGAGTTAGATACGCATACCCGAGCCTATCACAAAAAAGAGTATAATTGCTCGAAGTGTACTCTACGCTTTTCTTCGTACCTGGCGTTGCAAAGTCATAAAAGTAACTCGCACATCGCAACGTGTAATATTTGCTTTAAACCCTTCGCGACGGCTAAGAAGAGGCTTGAACATTTAAAACTCGAACATGGTGATGATGGTCTAACGTGTGGCTTTTGCGACAAAGTAATAAGTACCAAGATTGGGTTTCTGAGACACGCTTCGaaatgcactgaaaaggaaGAAAAGCATTCGCCTGAGGAATTAAAAGAACTTATTGGTGATAGGGTCGTGATAAAGAAAGCTAGCGTGAAAACTATTAGAAATAATATAGCGTGCCTTCTCAACAACTCCACAGCTGTACCGTTTAAATTCTTTATGAATAGATTCAGATGTTTTTATTGTCCGCAAGATTTTAACGAATGTGATGATCTGAAGGAGCACACAAAGATAGAGCATCCGCTTTGCGATACAACATTCAAATGCATGAGCATGCGAAACAGACAGGACGCGAAAATCAAAATAGATGTATCTTCGCTGTTTTGCAAATTATGTTTTGAGCCAATGAAAGATTTAGAAACACTAATTGATCATCTGATCTCTGAGCATAAATCGCATTATGATAAGACTGTAGATAGTAATATTCAAACGTTTTCTTTGATTAAAGATAGATTCCTTTGTCCCTTTTGTGGTGAAGTATTCCGGTATTTTAGTAACGTGCTAAAACATATAGGACGTGCTCACTCTAATAATAATACTGTATGCATGCACTGCGGCGCAACGTTCCGGAACTCACCGAATCTGAGAGCGCACATTTACAAGCACCATAAAGCCGCGAAGTACAAATGCGGGAAGTGTAAACTAGACTTTAGTTGCAAGAAATACTTCCAAACGCACTTAGGTCGGGTCCATGGGAACAAGATGGTGGAATGCGAGACGTGTAGGGAGAAGTTTGCGTCGGTTTACGAGAAGCAACGGCACATGATAAACGTGCATCAATCGGGACATAAATGTTCTTACTGTGGCAAGCTGTTTACGCGTAATTCTATAATGGTGGATCACGTGAGACGGACGCATTTGAAGGAGAAGAACGTTCAATGTGAGATTTGTTGCGAGCTCTTCTTCGATGTGCATCTGTTAAGAATGCACATGGTTAAGCATTACGGTGAGAGGAACTTTCATTGTGATCTCTGCGGCAAAAAGTTTCTCTGGAAGAAAAATCTGAGAGATGTAAACGGACCGGGACAAACGCAAAGTTTTAATAGACGAAGGAATCTTCAGATTTTGTTCAACAATACGTCATTGTGCCCTTTTAAGTGGCGAGGGAAATACCTGTGCTTTTACTGCGGAGAGGATATACCAAATTACGAGGAGTTGAAGAAACATACGAAAGCGCATGGCGCCTGTTCTGATAGAGACAGAGCGATACGATTAGTCAAAGCGGCTGACGCTGAGGTTAAAATCGATATATCTGACGTCACCTGTGAGATTTGTAATGAATCCTTCGCTAATTTCGATGATATTGTATACCATTTGATACATAAACATGAGTTGCCCTATGACAATAATGTGAAATTGTCCTTAGCAGTGTATCGTCTTGTGGATTTGcaatgtttgttttgtgaagagaaatttgattattttaacaaacttATAAAGCACGTTAATATAAGACATCCAAGCGAAAGTTACGAATGTTCCGAATGCCTTCAAATTTTCAATAAGAAGAGGGACTTGGACGCTCATACGCGAATGCATCATAAAAAGGATCACCGATGTCTCAAATGTTCTTTAACGTTCGCCTCGTATGCCGCTTTCAAGAAACACAATTCCAATTCTCATGTATCCACGTGTAATATATGTTTCAAAAGTTTTTCGTCGCTGAAGAAGCGGTTAAAACATACGAAGTTGGAACACGCAGACGAAATGCTAAAATGCGGTTTCTGCTTGAAAATAATGAGCACGAAACAAAGTTTTTTACGTCACGCTACCaagtgtaatataaaaattaagatgACCGAAAACGATGTTGCAATCGACGATGAAGAGAGGAAACCATCAGTTCTGCAAATCAGAAATAACGTTGCATGCGTCCTAAACATGTCCACCGCCATACCTTTCAAGTATTTCATGAGTAGATTCAGATGTTTTTACTGTCCGAAAGATTTCTATGATTGCACTGATCTGAGGCACCATACTGTAACCGAGCATCCCCATTGCGACACTAAGTTAAAAAGTATGAGATTACGTAATCGACATGATGGTTGTATTAAAATAGATATCGCATCTCTAGCTTGTAAATTGTGCTTTGAACCGATGCAGGATTTGGATTCGTTGATTGATCATCTCATTTCGAATCACAAGGCCAGATACGATAGATCTATTGATTGCAACATGCAACCGTACAAACTTATAAAGGACAATTTCGCTTGCCCTCTCTGTAGGGAAGTCTTCAGGTATTTCAGTTCGTTGCTGAGACATGTCGCTCAGTCCCACACagacaataaatacatttgtgtGTACTGTGGCAAGCCGTTTAGAAACGTGTCGAATTTACGCGCACATATTTCAACGAAGCACAACACGGTAGTTCATAAATGCAGCAAATGTGACCATGAGTTTGCATCGAACAGTCATCTCCAGACACATTTGGGCAGCGCGCACGGTGCCAAAGTCATCCAATGTTCGGAATGTCAAGAGAAGTTTATATCGAACTACAGGATGCAGAGGCATATGGTGAACGTCCACGGCTCTGGACATAAATGTAGTTACTGTGGTAAACTCTTCACGAGAAACTCCCTGATGGTCAACCACGTGAGACGGACACATTTGAAAGAAAAGAACGTTGAATGTTCGGTGTGTTTCGAGAGATTCTTCGACGGGCAACGCTTGAAGATTCACATGGTCAAGCATTATGGGGAGAGGAACTTTCACTGTGACGTGTGTGGAAAGAAGTTTCTATGGAAGAAGAACCTTATTGGTCACATGTCGTCACATGTCAAGAATGTGAATCAGTTGACGAGCTAG
Protein Sequence: MCEICEESKVNFDELVTHLIDEHNLLYDKEVKLVIMKYELENFKCVLCDQKCDNLIALLTHVSKDHETIKPYSCSECRQKFNKKWELDTHTRAYHKKEYNCSKCTLRFSSYLALQSHKSNSHIATCNICFKPFATAKKRLEHLKLEHGDDGLTCGFCDKVISTKIGFLRHASKCTEKEEKHSPEELKELIGDRVVIKKASVKTIRNNIACLLNNSTAVPFKFFMNRFRCFYCPQDFNECDDLKEHTKIEHPLCDTTFKCMSMRNRQDAKIKIDVSSLFCKLCFEPMKDLETLIDHLISEHKSHYDKTVDSNIQTFSLIKDRFLCPFCGEVFRYFSNVLKHIGRAHSNNNTVCMHCGATFRNSPNLRAHIYKHHKAAKYKCGKCKLDFSCKKYFQTHLGRVHGNKMVECETCREKFASVYEKQRHMINVHQSGHKCSYCGKLFTRNSIMVDHVRRTHLKEKNVQCEICCELFFDVHLLRMHMVKHYGERNFHCDLCGKKFLWKKNLRDVNGPGQTQSFNRRRNLQILFNNTSLCPFKWRGKYLCFYCGEDIPNYEELKKHTKAHGACSDRDRAIRLVKAADAEVKIDISDVTCEICNESFANFDDIVYHLIHKHELPYDNNVKLSLAVYRLVDLQCLFCEEKFDYFNKLIKHVNIRHPSESYECSECLQIFNKKRDLDAHTRMHHKKDHRCLKCSLTFASYAAFKKHNSNSHVSTCNICFKSFSSLKKRLKHTKLEHADEMLKCGFCLKIMSTKQSFLRHATKCNIKIKMTENDVAIDDEERKPSVLQIRNNVACVLNMSTAIPFKYFMSRFRCFYCPKDFYDCTDLRHHTVTEHPHCDTKLKSMRLRNRHDGCIKIDIASLACKLCFEPMQDLDSLIDHLISNHKARYDRSIDCNMQPYKLIKDNFACPLCREVFRYFSSLLRHVAQSHTDNKYICVYCGKPFRNVSNLRAHISTKHNTVVHKCSKCDHEFASNSHLQTHLGSAHGAKVIQCSECQEKFISNYRMQRHMVNVHGSGHKCSYCGKLFTRNSLMVNHVRRTHLKEKNVECSVCFERFFDGQRLKIHMVKHYGERNFHCDVCGKKFLWKKNLIGHMSSHVKNVNQLTS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00288234;
90% Identity: iTF_00288234;
80% Identity: -