Basic Information

Insect: Spicauda simplicius
Gene Symbol: -
Assembly: GCA_949699795.1
Location: OX453087.1:3521515-3527510[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 26 0.011 0.96 10.8 0.7 2 23 197 218 196 218 0.97

2 26 1.3 1.2e+02 4.2 0.4 1 23 222 244 222 244 0.81

3 26 0.081 7.4 8.0 4.4 1 23 249 272 249 272 0.94

4 26 3.6 3.3e+02 2.8 1.5 2 23 280 302 279 302 0.89

5 26 0.0001 0.0094 17.1 0.7 3 23 311 332 309 332 0.94

6 26 0.00053 0.048 14.9 1.6 1 23 338 360 338 360 0.98

7 26 2e-06 0.00018 22.5 1.4 1 23 366 388 366 388 0.99

8 26 3.6 3.3e+02 2.8 1.4 1 13 394 406 394 410 0.89

9 26 0.024 2.2 9.7 0.2 1 23 475 498 475 498 0.92

10 26 0.1 9.4 7.7 0.0 2 23 523 545 522 545 0.93

11 26 0.00022 0.02 16.1 0.6 2 23 568 589 567 589 0.97

12 26 0.024 2.1 9.7 0.6 1 23 593 615 593 615 0.97

13 26 0.35 32 6.0 3.2 1 22 620 641 620 643 0.87

14 26 0.02 1.8 9.9 0.6 2 23 651 673 650 673 0.96

15 26 0.001 0.094 14.0 1.0 2 23 681 703 680 703 0.95

16 26 5.2e-06 0.00048 21.2 0.6 1 23 709 731 709 731 0.98

17 26 0.88 80 4.7 0.7 1 15 737 751 737 754 0.89

18 26 1.6 1.5e+02 3.9 4.0 1 19 822 840 822 845 0.95

19 26 1.9 1.7e+02 3.7 0.3 2 23 872 894 871 894 0.91

20 26 0.44 40 5.7 8.2 2 23 917 938 916 938 0.97

21 26 1.5e-05 0.0013 19.8 1.3 1 23 942 964 942 964 0.99

22 26 0.021 1.9 9.8 0.8 2 23 1000 1022 999 1022 0.91

23 26 0.0021 0.2 13.0 0.6 3 23 1031 1052 1029 1052 0.95

24 26 1.6e-05 0.0015 19.7 1.6 1 23 1058 1080 1058 1080 0.97

25 26 2.8e-06 0.00025 22.1 0.2 1 23 1086 1108 1086 1108 0.98

26 26 0.001 0.092 14.0 3.8 1 23 1114 1137 1114 1137 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	26	0.011	0.96	10.8	0.7	2	23	197	218	196	218	0.97
2	26	1.3	1.2e+02	4.2	0.4	1	23	222	244	222	244	0.81
3	26	0.081	7.4	8.0	4.4	1	23	249	272	249	272	0.94
4	26	3.6	3.3e+02	2.8	1.5	2	23	280	302	279	302	0.89
5	26	0.0001	0.0094	17.1	0.7	3	23	311	332	309	332	0.94
6	26	0.00053	0.048	14.9	1.6	1	23	338	360	338	360	0.98
7	26	2e-06	0.00018	22.5	1.4	1	23	366	388	366	388	0.99
8	26	3.6	3.3e+02	2.8	1.4	1	13	394	406	394	410	0.89
9	26	0.024	2.2	9.7	0.2	1	23	475	498	475	498	0.92
10	26	0.1	9.4	7.7	0.0	2	23	523	545	522	545	0.93
11	26	0.00022	0.02	16.1	0.6	2	23	568	589	567	589	0.97
12	26	0.024	2.1	9.7	0.6	1	23	593	615	593	615	0.97
13	26	0.35	32	6.0	3.2	1	22	620	641	620	643	0.87
14	26	0.02	1.8	9.9	0.6	2	23	651	673	650	673	0.96
15	26	0.001	0.094	14.0	1.0	2	23	681	703	680	703	0.95
16	26	5.2e-06	0.00048	21.2	0.6	1	23	709	731	709	731	0.98
17	26	0.88	80	4.7	0.7	1	15	737	751	737	754	0.89
18	26	1.6	1.5e+02	3.9	4.0	1	19	822	840	822	845	0.95
19	26	1.9	1.7e+02	3.7	0.3	2	23	872	894	871	894	0.91
20	26	0.44	40	5.7	8.2	2	23	917	938	916	938	0.97
21	26	1.5e-05	0.0013	19.8	1.3	1	23	942	964	942	964	0.99
22	26	0.021	1.9	9.8	0.8	2	23	1000	1022	999	1022	0.91
23	26	0.0021	0.2	13.0	0.6	3	23	1031	1052	1029	1052	0.95
24	26	1.6e-05	0.0015	19.7	1.6	1	23	1058	1080	1058	1080	0.97
25	26	2.8e-06	0.00025	22.1	0.2	1	23	1086	1108	1086	1108	0.98
26	26	0.001	0.092	14.0	3.8	1	23	1114	1137	1114	1137	0.97

Sequence Information

Coding Sequence: ATGACAAGTCAACAACGTCAAGTTGTCATCAAAATTGATAACTGGGATAGTAGTACGGGACGAATCAAAACTGAAAGAATTATCTTGAAGAAAATAAGAAAGGATGGAAGCAAAGTCAAGGTGAAGAAAGAATCTGACGCTAATAGCGCTAAAGATAAGGATACAGTTAAAGACGATGATGTTACTgataaaaagaagaagaaatacgaaattaacAGGTCACCAGAGTTAACGAAAAATCGTGTTAACCTCAAAGCTATACTTCAGTATTCTAATGCGACGCCGATTCGCTGCCGTGGAGACATTGGCTACGCGTGTTGCTTCTGTGAAGATCAGTATCCTGAACCCGCTGCCCTCAAGAAGCACACGGTAGAAACGCATGACTACGATACTATGAGTATGTTGATGAAGGAAAAACGAGTCTATTCTGTCAAACTGGACATCACAGGGCTGCAATGCAAAATATGCTTTGAGAACATGCAAAATGTAGAACAATTAACAGATCACTTAGTAGACATACATGAAAAGacgctatttaaaaatataaggagCTACATCATGCCTATGAAGTTCGAATCTGACGTCCTACAGTGTTTTATGTGCTTGAACACGTTTAACAACTATAAAGGATTGGTGGAACATATGAATACGCATTCCAGAAATTTCATCTGCGAAGTCTGTGATGCAGGTTTCCTGAATCGCGACATTTTACGACACCACTCGAAGATCCACGATCTCGGCTCGTACGCTTGTGACCACTGCTCGAAAACGTTTAACACGTTTCGGAAAAAGAAATCCCACGAGAACTCAGTACATATACGTAGAAACATGGTGAATAAATGTGGATTTTGCAATGAGAAATTCAACGGTCACTACAAGAAGATTGTTCATTTGTCAGAAGTGCATGGTATTGATCCGACTGTGCTGAATTGCCAAGCGTGTGAAAGGACTTTCAAGAATCAGAGTGCGTTGAGGATTCACATACAACGGTTTCATTTATTAGAGCGACCGTACAGCTGTACCGAGTGTGAGCTGAGCTTCTACAAGAAGTTTGAGTTGGACAAGCACATGGTGAAGCACACTGGTATAAAGGACTTCCAATGCGACGTCTGCTTCAAGTCGTACGGAAGGAAGAGCACATTGCGCGAACACATGAGGATCCACAAGGACGATCGTCGCTTTAAATGTGTACACTGCGAAATGGCCTTTGTACAAAGGTGCAGTCAACGTGAGCTTCACGTTACAGTGGAAATACATGAAACGGACGAGGATTGTCAAGAGTTACGAGATCTAGACGCAGAGTTGAAAACGGCTAGACCGGATATCGGCCATGCCATGGAATTAGTGAAAAATCGTGTGAACTTCAAAGAGATCATTCGTTGCTCAAACGCAACACCATTTCGTGGGCTCCGAGATAAGGGTTACGCTTGCTGTTACTGCCCTGAAACATTTCCTGACCCGGCTATTCTGAAAAACCACACCTTGGCCAGTCATGATGACtccacaaaaataaaactcatGAAGGAAATGAAAGTTTATGCAGTGAGACTTGATGTGACTGGACTTGAATGTAGCATTTGCAATAAAGCAATGGACAACTTAGAAGAACTAATAGATCATCTGATATACGTACACGACAAAGTTATGCACAGAAATATCATGAATTTTCTTTTGCCATTCAAGTTTACGGGTGATGACTTGCGTTGCGCTCTCTGTTCGAAACCCTTCGTTAGATTCAAAAGCCTGTTGGAACACATGAATACGCATTACAGGAATTTTGTATGCGATATTTGCGACGCTGGGTTCGTGTACCGAGATATTCTGCGCCATCATTCGAAGTCTCACGAGAAGGGCGTCTTCACTTGCAACGTTTGCTCGAAGCAGTTCGACACACATCGTAAGAAGAAATCCCACGAGAGCGCTGTCCACAAGCGAGCGAATATGATCAACAAATGCGGTTTTTGCGGTGAGAAGTTCATCAGCTACGAGAAGAAGCTGAGGCATATGGCGAAAGCCCACGGCACAAGTATGCCAGTGCTGAAGTGTCGGGCGTGCGAGAAGACGTTTACGAGCCAGAATGCCTTCAGGATCCACTTGAATCGAGATCATATGATGGAGCGCAATTTTAAGTGCGACATTTGTGACATGAGTTTCTACGAGAGCGATTTACTGAAGAACCACATGATAAAACACACGAAGGAAAAGTCGCATCGTTGTAATGTTTGTTTGAAGTCCTACGGGAGAAAGAGTTCCCGACAACACATAGACGTTGAGTTAGAAAAGTATTCAGGGAGAGCAAATAAGAAAACAATTAGAATTATAACGATCAACCGGGAAGACACTGAAGCAAAATATGCGGATACTCTAAAACGGATAACGCCGATGTATAAGCAACTGACAAACTTGAAGGAAATAGTTTTATGGTCGAATGCAACTTTGATTAGGTCCAAAACAGACTTTGGATACGAATGCTGTTtttgtgatgaaaagtatcaAGAGCCCAGCGACTTGAAAGAACACTGCCTAGATAATCATAGGGGAATCGAGGGCGCAAAATTCTTGAATCGACCATTTGAGAATAGTTTCCTAGCAAAACTCGATATCACAGATTTGCGCTGTAATATTTGCTACAGCAGCATTGATACTCTCGAAGATTTAATTGAACATCTCCATGAGACGCACGATAGGAAAATCTTCGCGGATATCAAAAATCAAATGATACCCTTCAAATTCGATTCGTCTAATCTCCAATGCTGTATTTGTTTCAAGGGTTTTAATAAGTTCAAAATGTTACACGAACACATGCATACGCACTACAGAAACTACACATGCACGGAGTGCGACGCTGGGTTCGTCAACAAAAACACCCTGAGGAttcacatgcacacacacaaactGGGCATCTTTCAGTGCCAGTTTTGTGCGAAGATCTTCGATACGTATCTGAAGAAGCATTCTCATGAGCGATGCGTTCACAATGACGCGATACTCCTGAACAAATGCGGTTATTGTAATGAGAGGTTTAGAGATTCGAGGCAGAAGGACAAGCATTTGGCAGAAATACATGGTGTGAAGTTCCCGCAAGTGATATGCCAAGCGTGCAACAGACAGTTTGGGAGTCAGAACTCCCTGAAGATGCACATGAAAAGGGATCATCTGTTGGAGCGAAAGTTTAGTTGTACGGAGTGTGATAAGAGTTTCTTTGTGAAGACTGAGCTAAGCCGGCATATGGTGAAACATACCGGGACGAGGGAGTTTGAATGTCTGATATGCGGGAAGGCGTACGGACGGCAGAACACACTGCGCGAACATATGCGAATACATGCGAACGATCGTCGACACAAGTGTAGGATTTGTGGAATGGCGTTCGTTCAAAAATGCAGTTGGAGAGGACACATGCGTTCTAAACACGGACAGGATGTCTAG
Protein Sequence: MTSQQRQVVIKIDNWDSSTGRIKTERIILKKIRKDGSKVKVKKESDANSAKDKDTVKDDDVTDKKKKKYEINRSPELTKNRVNLKAILQYSNATPIRCRGDIGYACCFCEDQYPEPAALKKHTVETHDYDTMSMLMKEKRVYSVKLDITGLQCKICFENMQNVEQLTDHLVDIHEKTLFKNIRSYIMPMKFESDVLQCFMCLNTFNNYKGLVEHMNTHSRNFICEVCDAGFLNRDILRHHSKIHDLGSYACDHCSKTFNTFRKKKSHENSVHIRRNMVNKCGFCNEKFNGHYKKIVHLSEVHGIDPTVLNCQACERTFKNQSALRIHIQRFHLLERPYSCTECELSFYKKFELDKHMVKHTGIKDFQCDVCFKSYGRKSTLREHMRIHKDDRRFKCVHCEMAFVQRCSQRELHVTVEIHETDEDCQELRDLDAELKTARPDIGHAMELVKNRVNFKEIIRCSNATPFRGLRDKGYACCYCPETFPDPAILKNHTLASHDDSTKIKLMKEMKVYAVRLDVTGLECSICNKAMDNLEELIDHLIYVHDKVMHRNIMNFLLPFKFTGDDLRCALCSKPFVRFKSLLEHMNTHYRNFVCDICDAGFVYRDILRHHSKSHEKGVFTCNVCSKQFDTHRKKKSHESAVHKRANMINKCGFCGEKFISYEKKLRHMAKAHGTSMPVLKCRACEKTFTSQNAFRIHLNRDHMMERNFKCDICDMSFYESDLLKNHMIKHTKEKSHRCNVCLKSYGRKSSRQHIDVELEKYSGRANKKTIRIITINREDTEAKYADTLKRITPMYKQLTNLKEIVLWSNATLIRSKTDFGYECCFCDEKYQEPSDLKEHCLDNHRGIEGAKFLNRPFENSFLAKLDITDLRCNICYSSIDTLEDLIEHLHETHDRKIFADIKNQMIPFKFDSSNLQCCICFKGFNKFKMLHEHMHTHYRNYTCTECDAGFVNKNTLRIHMHTHKLGIFQCQFCAKIFDTYLKKHSHERCVHNDAILLNKCGYCNERFRDSRQKDKHLAEIHGVKFPQVICQACNRQFGSQNSLKMHMKRDHLLERKFSCTECDKSFFVKTELSRHMVKHTGTREFECLICGKAYGRQNTLREHMRIHANDRRHKCRICGMAFVQKCSWRGHMRSKHGQDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00288232;
90% Identity: -
80% Identity: -