Basic Information

Insect: Spicauda simplicius
Gene Symbol: -
Assembly: GCA_949699795.1
Location: OX453061.1:7412554-7431642[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 8.7e-05 0.0079 17.3 1.5 1 23 423 445 423 445 0.96

2 20 0.0046 0.42 11.9 0.4 1 20 451 470 451 473 0.93

3 20 2.1e-05 0.0019 19.3 5.6 1 23 492 514 492 514 0.98

4 20 3.8e-05 0.0034 18.5 4.6 1 23 520 542 520 542 0.99

5 20 3.8e-05 0.0034 18.5 5.3 1 23 548 570 548 570 0.97

6 20 2.5e-05 0.0022 19.1 7.1 1 23 576 598 576 598 0.97

7 20 1.8e-06 0.00017 22.6 2.7 1 23 604 626 604 626 0.97

8 20 0.0001 0.0094 17.1 6.7 1 23 632 654 632 654 0.97

9 20 0.0001 0.0093 17.1 6.5 1 23 660 682 660 682 0.97

10 20 4.9e-07 4.5e-05 24.4 1.9 1 23 688 710 688 710 0.98

11 20 5e-05 0.0046 18.1 7.9 1 23 716 738 716 738 0.98

12 20 4.4e-06 0.0004 21.4 6.8 1 23 744 766 744 766 0.98

13 20 1.7e-05 0.0015 19.6 6.0 1 23 772 794 772 794 0.98

14 20 7.9e-06 0.00072 20.6 5.2 1 23 800 822 800 822 0.96

15 20 0.00012 0.011 16.9 7.5 1 23 828 850 828 850 0.97

16 20 3.1e-06 0.00028 21.9 6.0 1 23 856 878 856 878 0.98

17 20 0.00027 0.025 15.8 9.5 1 23 884 906 884 906 0.97

18 20 2.8e-05 0.0026 18.9 4.5 1 23 912 934 912 934 0.96

19 20 0.00074 0.067 14.4 0.3 1 23 941 963 941 963 0.96

20 20 0.046 4.2 8.8 5.4 1 23 972 994 972 994 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	8.7e-05	0.0079	17.3	1.5	1	23	423	445	423	445	0.96
2	20	0.0046	0.42	11.9	0.4	1	20	451	470	451	473	0.93
3	20	2.1e-05	0.0019	19.3	5.6	1	23	492	514	492	514	0.98
4	20	3.8e-05	0.0034	18.5	4.6	1	23	520	542	520	542	0.99
5	20	3.8e-05	0.0034	18.5	5.3	1	23	548	570	548	570	0.97
6	20	2.5e-05	0.0022	19.1	7.1	1	23	576	598	576	598	0.97
7	20	1.8e-06	0.00017	22.6	2.7	1	23	604	626	604	626	0.97
8	20	0.0001	0.0094	17.1	6.7	1	23	632	654	632	654	0.97
9	20	0.0001	0.0093	17.1	6.5	1	23	660	682	660	682	0.97
10	20	4.9e-07	4.5e-05	24.4	1.9	1	23	688	710	688	710	0.98
11	20	5e-05	0.0046	18.1	7.9	1	23	716	738	716	738	0.98
12	20	4.4e-06	0.0004	21.4	6.8	1	23	744	766	744	766	0.98
13	20	1.7e-05	0.0015	19.6	6.0	1	23	772	794	772	794	0.98
14	20	7.9e-06	0.00072	20.6	5.2	1	23	800	822	800	822	0.96
15	20	0.00012	0.011	16.9	7.5	1	23	828	850	828	850	0.97
16	20	3.1e-06	0.00028	21.9	6.0	1	23	856	878	856	878	0.98
17	20	0.00027	0.025	15.8	9.5	1	23	884	906	884	906	0.97
18	20	2.8e-05	0.0026	18.9	4.5	1	23	912	934	912	934	0.96
19	20	0.00074	0.067	14.4	0.3	1	23	941	963	941	963	0.96
20	20	0.046	4.2	8.8	5.4	1	23	972	994	972	994	0.99

Sequence Information

Coding Sequence: ATGAATCAAGAACACCACAATATCAATACGGGTGGTGGCCAGCCGCCTGGCAATTCAGAGTCGCAGAACCAAAGAGTTCAAACTACGCAGCAGCAGCAAGGCTCGAATCTGCCACCTACAACGTCAGCTACTGATTTGAGAGTTAATTCGGCAGCCGTGAACGTCGCTTTGTCGAGCGTTGCCAAGTATTGGGTGTTTACAAATTTATTCCCTGGACCATTACCGCAAGTTTCTGTATATAATTTGCCTACCAATGCAAGAATTGAAAATGGCAAACCTGtacagGACCTCGGTCAGACTCACGGTATTCTTAATGGTGATCCAAATATCATACTTGGACATCACGCAGGGCAGCCACAGGTCACGGTTTCTGCCGCTGGCCAGCAGATACCAGTCCCTCAAATTATTGCAACACAATCTGGACAAACGCATGaAGCGCTTGTGACACATGGTCAACAACAGGAGCTTACGACACAGCAGGCTTCTAGTGGGGCACAGGTGACAGTGAGCGCAAGCCAAGCCACCCATCAGCAGGTACCCAATAATCGGGTCGAGTTTGTACAACACCATAACATTGACATGGGTCATCAttcacaacaacaacaacaacacttACTTCAACAACAGCTTTTGGCAGCTACGAGGGCAGATCATGCCAACCAACAGATCCAATTGACTGTAAGTGAAGATGGAATTGTCACAGTGGTGGAACCTGGTGCAGGCAAGCTTGTGGACAAAGAGGATCTCCATGAGACTATCAAGATGCCTACAGACCATACTCTGACTGTTCATCAGTTGCAACAGATTGTTGGACACCATCagGTAATCGACAGCGTTGTACGCATAGAGCAAGCGACGGGCGAACCGGCGAACATCCTAGTGACGCAAAACCCCGACGGAACCACTTCGATAGAGACGAGCGCGGCGGACCCGCTCGCCATCGTCAAAGACGAGAAAGCTGTCGCTAAGATCGAAGCCGCCCAGTTCGCGATACCCGCTGAGATCAAGGAGATTAAGGATCTGAAGAGCGTTGGTGCCATGGGCATGGAAGGCGCTGTGGTTAAGATCTCAGCGGGCGCGAGCGAACACGATCTTCATGCGATGTATAAAGTGAATGTCGAGGATCTGTCACAGCTACTTGCCTATCATGAAGTGTTTGGCAAACTGAACGCGGAGGGTCAACAACAAGCTAAGGTCATAAGCGAGGTGGAGGCGGAAGCTGGTACCAGCGCGGCCATGTCAGAAGCGGACTCGTCGCCCGGTCATCACGCCTGTGATATTTGCGGGAAGATTTTCCAATTCCGTTACCAACTTATTGTTCATAGACGATATCACGGAGAAAGCAAACCATATATGTGTCAAGTATGCGGTTCTGCGTTTGCTAATCCTGCAGAGTTATCAAAGCATGGAAAATGTCATTTAGCGGGTGATCCCGCCGAGAGACAAACGAAGAGGTTAACACAAGACAAGCCATATGCCTGCACTACGTGTCATAAAACATTTTCACGGAAAGAACACCTTGACAACCACGTGCGAAGTCATACGGGTGAAACACCGTACAGATGCCAGTACTGCGCGAAGACGTTCACCCGCAAGGAGCACATGGTGAACCACGTGCGCAAGCACACGGGCGAGACGCCGCACCGCTGCGACATCTGCAAGAAGAGCTTCACGCGCAAGGAGCACTTCATGAACCACGTCATGTGGCACACTGGTGAAACGCCGCACCATTGTCAAATATGCGGCAAGAAGTATACTAGGAGGGAGCATTTAGTGAGCCATATGAGGTCACATACAAACGATTCCCCGTTCCGCTGCGAACTGTGCGGCAAGTCCTTCACAAGAAAGGAGCACTTCTCCAATCACATATTGTGGCATACGGGCGAAACGCCGCACAGATGCGACTTCTGCTCTAAGACGTTCACGCGCAAGGAGCACCTACTGAACCACGTGCGGCAACACACGGGCGAGTCGCCGCACCGCTGCAACTTCTGCTCCAAGTCGTTTACGCGCCGCGAACACCTCGTCAACCATGTCCGCCAGCATACTGGTGAAACGCCTTTCCAGTGTGGTTATTGTCCGAAAGCGTTCACCAGGAAGGACCATCTCGTGAACCATGTCCGGCAACACACGGGCGAGTCTCCGCACAAGTGTTCGTTCTGCACGAAGTCGTTCACGCGCAAGGAGCACCTCACGAACCACGTCAGGCAGCATACGGGCGAGTCGCCGCACAGGTGTTCCTACTGTGCCAAGTCATTCACTAGAAAGGAACATCTGACCAACCATATCAGACGGCACACGGGCGAAACTCCACACAAGTGCACGTTCTGCCCGCGCTCGTTCTCGCGCAAGGGGCACCTCAACAACCACGTGCGGCAGCACACCGGCGACACGCCGCACGCGTGCACGTACTGCAACAAGAGCTTCACGCGCAAGGAGCATCTCGTCAACCATGTGCGACAACACACGGGCGAGACGCCGTTCAAGTGTACGTTCTGCACGAAGTCGTTCTCGCGCAAGGAGCACCTCACTAACCACGTACACCTGCACACGGGGGAAACGCCCCACAAATGTCCGTTCTGCACGAAGACGTTCTCAAGGAAGGAGCATCTCACCAACCATGTTAGGATACATACAGGCGAGTCTCCTCATCGGTGTGAGTTTTGCCACAAGACATTTACTCGAAAGGAACACCTATTAAATCACTTGAAACAACACACGGGCGATACGCCACACGCGTGTAAGGTGTGCTTGAAACCGTTTACGAGAAAAGAACACCTTAGTACACATATGAGATCGCACAGTTGCGGCGAACGACCTTTCAGTTGTGGGGAGTGCGGTAAATCTTTTCCATTGAAGGGCAACCTACTCTTCCATGAGAGGTCACACAACAAGTCGAGTGGTTCTAGACCATTCCGATGTGATGTCTGTTCGAAGGATTTCATGTGTAAAGGACACCTAGTGTCGCACCGACGGACGCATACAGAGGCGACTGATAGTGGAGCGAGCACTGAGCCGACGGCCGAGAGTGAAGACTGCGGCGATTGCAACAAATGCGAGAAAGAAGCCCCCGAACGACCCGAAAGAAAACACGACACAagGGCGACTTCTGAAAGTAGACCAACGGAGAGCAGTGTAGCACAAACTCAACAAACTAACACAGCTGTGATGCAAATAACAAGTCAACAAGTCCGAACGGGAACAACGAGTAACCCTCCAAGTGAAGCAACCGCCACTTTCACTCACACGGCGAGCTCGCAGCACCACGCCAGTACCGCGATAGCGCACCATCCTGTCACGGTCAACTACTAG
Protein Sequence: MNQEHHNINTGGGQPPGNSESQNQRVQTTQQQQGSNLPPTTSATDLRVNSAAVNVALSSVAKYWVFTNLFPGPLPQVSVYNLPTNARIENGKPVQDLGQTHGILNGDPNIILGHHAGQPQVTVSAAGQQIPVPQIIATQSGQTHEALVTHGQQQELTTQQASSGAQVTVSASQATHQQVPNNRVEFVQHHNIDMGHHSQQQQQHLLQQQLLAATRADHANQQIQLTVSEDGIVTVVEPGAGKLVDKEDLHETIKMPTDHTLTVHQLQQIVGHHQVIDSVVRIEQATGEPANILVTQNPDGTTSIETSAADPLAIVKDEKAVAKIEAAQFAIPAEIKEIKDLKSVGAMGMEGAVVKISAGASEHDLHAMYKVNVEDLSQLLAYHEVFGKLNAEGQQQAKVISEVEAEAGTSAAMSEADSSPGHHACDICGKIFQFRYQLIVHRRYHGESKPYMCQVCGSAFANPAELSKHGKCHLAGDPAERQTKRLTQDKPYACTTCHKTFSRKEHLDNHVRSHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQICGKKYTRREHLVSHMRSHTNDSPFRCELCGKSFTRKEHFSNHILWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCNFCSKSFTRREHLVNHVRQHTGETPFQCGYCPKAFTRKDHLVNHVRQHTGESPHKCSFCTKSFTRKEHLTNHVRQHTGESPHRCSYCAKSFTRKEHLTNHIRRHTGETPHKCTFCPRSFSRKGHLNNHVRQHTGDTPHACTYCNKSFTRKEHLVNHVRQHTGETPFKCTFCTKSFSRKEHLTNHVHLHTGETPHKCPFCTKTFSRKEHLTNHVRIHTGESPHRCEFCHKTFTRKEHLLNHLKQHTGDTPHACKVCLKPFTRKEHLSTHMRSHSCGERPFSCGECGKSFPLKGNLLFHERSHNKSSGSRPFRCDVCSKDFMCKGHLVSHRRTHTEATDSGASTEPTAESEDCGDCNKCEKEAPERPERKHDTRATSESRPTESSVAQTQQTNTAVMQITSQQVRTGTTSNPPSEATATFTHTASSQHHASTAIAHHPVTVNY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01030446;
90% Identity: iTF_00970589;
80% Identity: -