Ssim022035.2
Basic Information
- Insect
- Spicauda simplicius
- Gene Symbol
- LZTR1
- Assembly
- GCA_949699795.1
- Location
- OX453077.1:10988680-10996720[-]
Transcription Factor Domain
- TF Family
- BTB
- Domain
- zf-C2H2|ZBTB
- PFAM
- PF00651
- TF Group
- Zinc-Coordinating Group
- Description
- The BTB (for BR-C, ttk and bab) [6] or POZ (for Pox virus and Zinc finger) [1] domain is present near the N-terminus of a fraction of zinc finger (Pfam:PF00096) proteins and in proteins that contain the Pfam:PF01344 motif such as Kelch and a family of pox virus proteins. The BTB/POZ domain mediates homomeric dimerisation and in some instances heteromeric dimerisation [1]. The structure of the dimerised PLZF BTB/POZ domain has been solved and consists of a tightly intertwined homodimer. The central scaffolding of the protein is made up of a cluster of alpha-helices flanked by short beta-sheets at both the top and bottom of the molecule [2]. POZ domains from several zinc finger proteins have been shown to mediate transcriptional repression and to interact with components of histone deacetylase co-repressor complexes including N-CoR and SMRT [5, 3, 4]. The POZ or BTB domain is also known as BR-C/Ttk or ZiN.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.1e-14 4.5e-12 46.9 0.0 4 109 19 154 16 155 0.87 2 5 1.9 7.7e+02 1.1 0.0 77 108 154 185 152 187 0.87 3 5 2.6e-09 1e-06 29.6 0.0 9 49 252 290 249 296 0.85 4 5 1.6e-14 6.3e-12 46.4 0.0 14 96 294 376 293 391 0.85 5 5 1.1 4.3e+02 1.9 0.0 77 106 391 420 380 424 0.80
Sequence Information
- Coding Sequence
- ATGTACGTCCTGACGAACTACCCTCGATGCACGCTGCACGACGACTTCGGCCGGATCCTGAAGTCTCAGCAGTTTTGCGAGGTGACCATCCTGGTGGGGCCCGAGAAGACAACGGTGCCCGCCCACCAGGCCATGCTGGTAGCCAGGTCGCAGTACCTCCGATTGAAGATCGACAAAGCGCGTGTAGACCTAGCCGCCCAGATAGCAGAAGGGGAGGTGGAACAAGTCCCGTGGTCGTACAAGTCGAAGCCGCAGTTAACAATCACACTACCAGAAGCAACTCCCGAGGCGTTTAACATGGTGCTGAATTATATTTACACTGATCGGATTGATCCAACTGAGAAagACGACGACCCCGGCTCTCCCGCGACGATCCTGCTGGTGATGGAGGTGCTCCGGCTGGCGCTGACGCTGAAGGTGCCGCGACTGCGAGGACTATGCGCGCGGTACCTGCGCGCGAACCTCTGCCTCAGCAACGTGCTGCAGGCGCTGCACGCCGCGCACTACGCCGGCCTGCAGTGCATCAAGGAGTACTGCCTCAGGTTCGTCGTGAAAGACTACAACTTCACGCAGATTGTAATGTCGAAAGAATTCGAAGTGTTGGAGCAGAAATTGATGGTTGAGGTGATACGACGCAATCAGGTGCCTCCACAGAAGGCCTCCACCCAAAACAACATTGACTGCGACGATGAAATTATcgGTACGACGCTGGAGCAGGACATGTGCGTGTTCGTgtccggcggcggcggcgcggagCTGGCGGACGTGCAGCTGCGCGTGGGCGGCGCGCCGCGGCCCGCGCACCGCTCCGTGCTCGCGGCGCGCGCCTCATACTTCGAGGCGATGTTCCGCTCCTTCTCGCCTCAGGACAACATCGTTAACCTGCGCGTGGGCGGCGCGCCGCGGCCCGCGCACCGCTCCGTGCTCGCGGCGCGCGCCTCATACTTCGAGGGGATGTTCCGCTCCTTCTCGCCGCAGGACAACATCGTTAACATCCAAATTTGCGACACGGTTCCATCGGAAGAAGCGTTCGACTCCCTGCTAAGATACATCTACTACGGCGACACCAATATGCCTACTGAGGACTCGTTATACCTTTTCCAAGCGCCAATATATTAcgGTTTCACAAACAACCGTCTGCAGGTGTTCTGCAAGCACAACCTGCAGAGCAACGTGTCGCCGGACAACGTGCTGGCCATCCTGCAGGCGGCCGACCGCATGCGCACCGCCGACATCAAGGAGTACGCGCTCAAGATGATCGTGCATCACTTTAGCTTGGTGGCACGTCAGGACGCAATAAAGAACTTAGCACAGCCGTTGCTAGTGGACATCGTGACGGCGCTCGCCGAAGAGGCGCAGTGCGACACGCCCCTCCCGCCCTCCCAGCCGCGCTCCCTCCCCTCCTCCTCCTCCGCGGACACCCTCTCCGACGACCCCGAGTACTTGCGCCACAAGTCCTTCAAGTCCTAG
- Protein Sequence
- MYVLTNYPRCTLHDDFGRILKSQQFCEVTILVGPEKTTVPAHQAMLVARSQYLRLKIDKARVDLAAQIAEGEVEQVPWSYKSKPQLTITLPEATPEAFNMVLNYIYTDRIDPTEKDDDPGSPATILLVMEVLRLALTLKVPRLRGLCARYLRANLCLSNVLQALHAAHYAGLQCIKEYCLRFVVKDYNFTQIVMSKEFEVLEQKLMVEVIRRNQVPPQKASTQNNIDCDDEIIGTTLEQDMCVFVSGGGGAELADVQLRVGGAPRPAHRSVLAARASYFEAMFRSFSPQDNIVNLRVGGAPRPAHRSVLAARASYFEGMFRSFSPQDNIVNIQICDTVPSEEAFDSLLRYIYYGDTNMPTEDSLYLFQAPIYYGFTNNRLQVFCKHNLQSNVSPDNVLAILQAADRMRTADIKEYALKMIVHHFSLVARQDAIKNLAQPLLVDIVTALAEEAQCDTPLPPSQPRSLPSSSSADTLSDDPEYLRHKSFKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01153108;
- 90% Identity
- -
- 80% Identity
- -