Ssim008978.1
Basic Information
- Insect
- Spicauda simplicius
- Gene Symbol
- Rel
- Assembly
- GCA_949699795.1
- Location
- OX453062.1:7635625-7671160[-]
Transcription Factor Domain
- TF Family
- RHD
- Domain
- RHD domain
- PFAM
- PF00554
- TF Group
- Beta-Scaffold Factors
- Description
- Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.3e-36 9.7e-32 111.0 0.0 1 168 57 224 57 225 0.88
Sequence Information
- Coding Sequence
- ATGTCGTCGAGCGATCAGGATATGAGCGACACTTCCAACATGGAGTCGCCGTATTCCCAAATAGAGTCTCCTTACAGTTCGCCGTCGCAGCAAGTTCCTCAACTAGCAAACTTCATGAATGTGTTGACTTGTGCCGAAAATCAAAGACGATCTAAAACTGgACCTTATTTGAGAATTGTGGAGCAGCCGCAAGACCATTTTAGATTTAGGTACAGAAGTGAAATGATTGGAACCCATGGTTGTCTACTTGGAAAATCCACAAACTCAAGCAAAACAAAAACGCATCCCACTGTTGagctGATGAATTATTCGGGAAAAGCGCTTATTAGATGTATACTGGCTCAGCACAACAATCCAAACGAGCATCCACACAAGCTTCTAGAAGACGACCAGGACAGGGATGTCAGTAAGGAAGTTCCTGGTAACGGGAGTTATATGGTTGGGTTTGGAGGTATGGGTATCATACATACAGCCAAAAAAGATGTTTCgacattattgttcaaaaagTTTACTGGTCAAGGAGTAAACATGGACGAAAAAGATctacGTTTGCACTGCGAGAACATAGCTAGGAACATCAACTTGAATATAGTTCGTCTGAGATTCAGCGCTCACGATTTGACCACGGACGCGGAGATTTGCCCTCCGGTTTTTTCAGAGCCAATACACAACATGAAGAGCGCTGCCACGAACGACCTGAAGATATGCAGAATCAGCCGCATCTCTGGCGGACCCCGCGGCGGTGACGATGTCTTCGTTCTCGTGGAAAAAGTCAACAAGAaGAACATAATGATCCGTTTCTACGAGCTGGGACCGAGCGGAGAGGAAGTCTGGACAGCCAATGGAGTATTCTTGCAGACTGATGTACATCATCAATACGCCATTGTCTTTAGAACGCCAAAGTACAGGGACTTACAAATAGCGAACGACGTGAAAGTGTTCGTTGAGTTGGTCCGACCGTCGGACGGACGAACGAGCGAACCGCGCGAGTTTACGTACAAAGCGGACCCCGTGTACAGGCAGAACAAGAAGAGGAAGGCCAATTCGTCGTTCTCGTCGATCAACAGCTCATCAGggGGATCTCTTAACAGCATAGACTTGCCAACGGCAGTGCAAGCAATGAACATACCGCGTATCCCGCAAGCGTTTGCGTCGAGCGATCCGATGGCGAACGCGCTAATGCACGACGTGAGCGGCTCCGTGACGTTGTCGGTCGCCCCGCTGTCCGCGCCGCTCGCCTCCCCGTTCGCCGCGCCGCTCTCCGCCCCGCTCTCCGCTCCGCTCATCACCCCGCACGCACAGTCCTACAGCTCCGTGGGCCCGCCGGAGATACAATTGGACTCCACTGAAATGGATAATATAGTCAACGGCAATATTCCGCCGGAGGAGCGTGCGCGGTTTCATGAGATGTTAAATAATGATTACATGAGACCATTCAATGATAGTTTCCCGAACTTACATTTCAAGCAGGACACGAAACCAACATTGAAGACAGAATCTGCGAGTCAATCGGAAATGCTGATCGACGATGAACTGCCGGGGAAAATGAACAAAAACAGCGAATACACCGCGTTCTACACTTCTGAAGATGGCGTTGAAGTGAAAAAGCTAGTGAAGGAGCTCTGCGAGATAATGAGAAACAATACAGGGTACAAGAAACAGGTCGTCCGGGATAAGTTGGAAAGACTTTTTGAAATGAGGCTATCTAATGGTGACACGTAA
- Protein Sequence
- MSSSDQDMSDTSNMESPYSQIESPYSSPSQQVPQLANFMNVLTCAENQRRSKTGPYLRIVEQPQDHFRFRYRSEMIGTHGCLLGKSTNSSKTKTHPTVELMNYSGKALIRCILAQHNNPNEHPHKLLEDDQDRDVSKEVPGNGSYMVGFGGMGIIHTAKKDVSTLLFKKFTGQGVNMDEKDLRLHCENIARNINLNIVRLRFSAHDLTTDAEICPPVFSEPIHNMKSAATNDLKICRISRISGGPRGGDDVFVLVEKVNKKNIMIRFYELGPSGEEVWTANGVFLQTDVHHQYAIVFRTPKYRDLQIANDVKVFVELVRPSDGRTSEPREFTYKADPVYRQNKKRKANSSFSSINSSSGGSLNSIDLPTAVQAMNIPRIPQAFASSDPMANALMHDVSGSVTLSVAPLSAPLASPFAAPLSAPLSAPLITPHAQSYSSVGPPEIQLDSTEMDNIVNGNIPPEERARFHEMLNNDYMRPFNDSFPNLHFKQDTKPTLKTESASQSEMLIDDELPGKMNKNSEYTAFYTSEDGVEVKKLVKELCEIMRNNTGYKKQVVRDKLERLFEMRLSNGDT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -