Spin027630.1
Basic Information
- Insect
- Sphinx pinastri
- Gene Symbol
- Znf711
- Assembly
- GCA_947568825.1
- Location
- OX387639.1:11215563-11224662[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00087 0.071 14.2 2.0 1 23 248 270 248 270 0.98 2 11 0.54 44 5.4 2.5 1 23 277 299 277 299 0.97 3 11 1 84 4.5 0.4 1 20 303 322 303 326 0.73 4 11 1.1e-05 0.00092 20.1 5.5 1 23 333 356 333 356 0.96 5 11 4.5e-05 0.0037 18.3 0.2 3 23 364 385 362 385 0.96 6 11 0.00031 0.025 15.6 2.6 2 23 399 420 395 420 0.93 7 11 7.2e-06 0.00059 20.8 0.7 1 22 426 447 426 451 0.94 8 11 0.00013 0.011 16.8 1.8 2 23 460 482 459 482 0.95 9 11 5.3e-05 0.0043 18.0 2.2 1 23 488 511 488 511 0.98 10 11 4.1e-05 0.0033 18.4 3.2 1 23 520 542 520 542 0.98 11 11 0.00071 0.058 14.5 0.2 1 23 548 571 548 571 0.97
Sequence Information
- Coding Sequence
- ATGGTGGATGTGATGGAGGCGGTGGAAATGTACTGTTTCGGTTGTTTGAGCAGTACCAGTGAAATACATGTGTTGCATCAATATAACATGAACAATGGGCCACTACAAGCTATTTTGCAGGTGGACAGCCTTCATTTGTGCTACCTATGCAGAAGATTGGCTCAAAGAGCAGACACATTCATCCAGAATGTACAAAGCAATCAAATACTATTGGAGAATTTTCATAGTATGATGGGTGACACACTTCAAGCGGTGAAGAACCAAATACATCCGATACTAGATCTTACCCACGTTTCTCTGAGTGCCATAGAGTTTCTGCATAATGGAGACGATATAAAATTAGAGAAGTATGGTAATGATCTTATAGGAGAATTCATACAGAAGGATGAGGAATCTAAAGATTTGCCAGGGGCAGCGTCTCAAGAAGACATAAAAATAGAAATGAAAGAGGAGGATGGTGATGGGATTGATGACAATTTAATGGATGATGATTACCAAGATGCCTATTTTAAAGAAGATTCATTCCCACTGAAGGAATTACTTAAGGAAGAAGTGGAAGGGGAGGAAATTGACTTAATCAGTCTCAAGAACTCATTAAAACGAGCTAAAACTAAAGGCACTAAGAAAATCAAATTAAATGGCAAAGAATCACCATTAATACAAAAAGTGTATTTGACAAAGAAGCAATGTCTTGAAGAGCGACAGCGCCTGGCGCAGGACCCCAAGTACCTGGACTCTACGTTCAAGTGCACGGACTGTCTCAAAGGGTTCAACTTCAAGCCGAGCTACGATAAGCACATGGAAAAACACAGTGAGAGCATGGGCCCACACCGATGCGAGGTTTGCAAGCAACGCATGGACACGGAAGAGAAGCTCGCTAATCATAAAAAATACCACGAAGTGCGGTACAAGTGTTCAGAATGCGGTCTGATGCGAAGCGGTCGGCTCACTATACGAGATCACTACACTGCGTTCCACTGTCACGGATACTATCAGTACAACTGTCCGCACTGTCCCAAGTCATTCAAGCGACAAGTGTCCATGAGGAAGCATATATGTTACTCCCACAAGAACAAGGAGCGAGTTATTTGTGCGTATTGTAATAAAAGCTATGCTAGTAAAGAAGTGCTAAAGGCGCATATGATGAGGAGGCATCCAAAGAAAGTGTCCGCCGGCGAGAAATGCAAGCGCTGCGTGTGCCAGGAGTGCGGGATGGCGTTCGTGTCTCCCTCCCAGCTGAGGAGTCACAGCGTCAAGCACACGCTCAATAGGAACTACTACTGCGTCGAGTGTGACAAGAGCTTCAAATCAGACTCTACGCTAAAACAACATTTGAAAACGGCGTCACCTCACGTTAATTATATAGATTTACCATTACCTTGCACGCACTGTAACAAAAGGTTTGCGATCCGAAGAGACCTAGAGAGGCACACTAACAGGGTCCATTTGAACTTGAGACCTTATAAATGCGACCGCTGTGATAAGTCTTACGTGACGTCATGGTGCCTGACTGAACACAAGCGGATCATCCACGAGGGATACAAAAGGCCCATGAAATTCTCTTGTTCCATGTGTGACAAAGTGTTCGATCGTAACCACATTCTAAAAACCCACCTTCGAACCCACACCGGCGAGAGACCATACCAATGCAGCAAATGTCCTGCGCAGTTCAGCCAAGCTGGCATTCTGAATACGCACATGAAGCTCATACACCTCAAACTAACCAGAGACGGTAGACCCAAGACGCTTGTCAAGAAATAG
- Protein Sequence
- MVDVMEAVEMYCFGCLSSTSEIHVLHQYNMNNGPLQAILQVDSLHLCYLCRRLAQRADTFIQNVQSNQILLENFHSMMGDTLQAVKNQIHPILDLTHVSLSAIEFLHNGDDIKLEKYGNDLIGEFIQKDEESKDLPGAASQEDIKIEMKEEDGDGIDDNLMDDDYQDAYFKEDSFPLKELLKEEVEGEEIDLISLKNSLKRAKTKGTKKIKLNGKESPLIQKVYLTKKQCLEERQRLAQDPKYLDSTFKCTDCLKGFNFKPSYDKHMEKHSESMGPHRCEVCKQRMDTEEKLANHKKYHEVRYKCSECGLMRSGRLTIRDHYTAFHCHGYYQYNCPHCPKSFKRQVSMRKHICYSHKNKERVICAYCNKSYASKEVLKAHMMRRHPKKVSAGEKCKRCVCQECGMAFVSPSQLRSHSVKHTLNRNYYCVECDKSFKSDSTLKQHLKTASPHVNYIDLPLPCTHCNKRFAIRRDLERHTNRVHLNLRPYKCDRCDKSYVTSWCLTEHKRIIHEGYKRPMKFSCSMCDKVFDRNHILKTHLRTHTGERPYQCSKCPAQFSQAGILNTHMKLIHLKLTRDGRPKTLVKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00063812; iTF_01010636; iTF_00859731; iTF_00859729; iTF_00341568; iTF_00858816;
- 90% Identity
- iTF_00859731; iTF_00859729;
- 80% Identity
- -