Basic Information

Insect: Sphinx pinastri
Gene Symbol: -
Assembly: GCA_947568825.1
Location: OX387620.1:7368910-7375874[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00091 0.074 14.1 1.9 1 23 223 246 223 246 0.96

2 12 0.12 10 7.4 1.0 3 23 255 275 253 275 0.94

3 12 1.5e-05 0.0013 19.7 4.2 2 23 282 303 281 303 0.97

4 12 5.6e-06 0.00046 21.1 0.2 1 23 309 331 309 331 0.98

5 12 0.0032 0.26 12.4 3.3 1 23 340 362 340 362 0.98

6 12 0.00012 0.0096 16.9 0.3 6 23 372 389 367 389 0.92

7 12 0.0064 0.53 11.5 11.6 1 23 395 417 395 417 0.97

8 12 4.1e-08 3.3e-06 27.8 2.0 1 23 423 445 423 445 0.99

9 12 7.2e-07 5.9e-05 23.9 2.1 1 23 451 473 451 473 0.98

10 12 0.00016 0.013 16.5 0.4 1 23 479 500 479 500 0.97

11 12 0.0011 0.09 13.9 1.8 1 23 506 528 506 528 0.96

12 12 1.9e-06 0.00016 22.6 1.4 1 23 534 556 534 556 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00091	0.074	14.1	1.9	1	23	223	246	223	246	0.96
2	12	0.12	10	7.4	1.0	3	23	255	275	253	275	0.94
3	12	1.5e-05	0.0013	19.7	4.2	2	23	282	303	281	303	0.97
4	12	5.6e-06	0.00046	21.1	0.2	1	23	309	331	309	331	0.98
5	12	0.0032	0.26	12.4	3.3	1	23	340	362	340	362	0.98
6	12	0.00012	0.0096	16.9	0.3	6	23	372	389	367	389	0.92
7	12	0.0064	0.53	11.5	11.6	1	23	395	417	395	417	0.97
8	12	4.1e-08	3.3e-06	27.8	2.0	1	23	423	445	423	445	0.99
9	12	7.2e-07	5.9e-05	23.9	2.1	1	23	451	473	451	473	0.98
10	12	0.00016	0.013	16.5	0.4	1	23	479	500	479	500	0.97
11	12	0.0011	0.09	13.9	1.8	1	23	506	528	506	528	0.96
12	12	1.9e-06	0.00016	22.6	1.4	1	23	534	556	534	556	0.98

Sequence Information

Coding Sequence: ATGGATATTAACAATATACACGTAGCAAAACCGGAAAAATCTGAAGAAAGCAATGGCGCAAATGAATATTTCGAAATCAAGATCCCTTTAAACTTATTCCAATACCTCAGTGCAGAGGGTTGTGATCTGCAGAACTTGTGTCGCATCTGTTTGTCCCTAGATAATGAAGTGATGTTTCCATTGTGCAGCGAAGACAATAGTTTATATTCCAATATGTTTTCTAATTTCACAACTTTACCGGCCTATTTTGGTGATGGTCTGCCTTCAAACATCTGCTCTTCTTGTCAAGCTCAAGTTGTTAACTGCTATGAATTCAAGGCTCTGTGTGAACGATCTAATTATACATTAAAGTCTATATTAAAAGGTGAATTCACTGCCAAAGATGAAATACTTGATAATGATGACTATTTACAGAATTTACAAGAAACAAAGAAAGAAAAGGAAGTAGAGCAGCAAAATTTTAGAATAGAAGAAGAAAATCAAGATACTCCATATTTAGAAGACTTTGGTGAGGTATCTAATGAGAATGTGACACGACAATGTAATTCAGGGTACACAAATGCAGATGTAAAGGACCCAGCATCATTTTCCGCTACAGATCCTAAAAGTCTGTTGGATGAAACTTATTCTGTAAATGTTGGAAGTAATAAGAACAGTAAAAGTTCTTATACATGTTCGTTTTGTGGTAAGAACTACATGAAGTTGAAAACACTAAGGGCGCATGTGAAGAACACGCACAAAGAATCTGAACGACCATATGGATGTAACCAGTGCAAAGATACATTTAATTCCGAACATGATCTCAAGCTGCATGCAGCCTTACACCCAACGGGATCTGTGTGGAAATGCAATAAATGCGAGAAGGAATTTCATTCAAAATCGATGCTACGTCGCCACATACAGCGGCACATGGAGTCGAAGCGGTACGCGTGCGAGACGTGCGGCAAGCTGTTCATAGAACTGTACGCGCTGCGGCGGCACATGCGCGTGCACACCGGCGAGCTCGTCGAGAAGAAATACAAGTGCCATCTCTGCGACAAAAAGTACCGGTGGCGCACGCAGCTGTCGGCGCACGTGTCGCGTCACGCGGGCGCGCGGCCCTGCGCATGCGCATGCGGCAAGGCCTTCTCCACGCCGCGCCTGCTCGCCAGCCACCAGCGCGTGCACGACGACCGCAAGCCGCACGCCTGCCACTACTGCGACAAGAGGTTCCGACACGAGTCGACGCGCAACACGCACCACCGCACGCACACAGGCGAGAAGCCGTACGTGTGCTGCACCTGCGGGAAGGCCTTCATACAAAACTCAAACCTCACGCTGCACATGCGCACACACACCGGCGAGAAGCCGTACTCGTGCTCGAAATGTTGGCGCAAGTTCTCGTCGAGTTCTACATTGAAGGCGCACTTGCGCAGCCACACCGGCGAGCGGCCTTACGAGTGCAAAATTTGTGGGAAAAAGTTCGCGCGCGTGCCGCTGCAGACGCACATGCGGCTCCACACGGGCGAGCGGCCGCACCGCTGCAGTGCCTGCCCCAAGACCTTCGTCAACGCCTCGCGTCTGCGCGAACACGCACACGTCCACACCGGTGAAAAACCATTCGAATGTGCAATATGCGCTCAAAAGTTTCCCACAAAGTCCCACCTGATTAAACACCTGAGAACCCACCAACCGCAGAAGAAATCCAAAAGAGTGGTGGTGCGCAAACCCGAAATATTAGTTTCTAATAAAATCGTCATATCCGAAAATACGACTATTGAAGGGTTGAAATCGGAGACTGTGAGAGCGGAGGAGATTGCATGCAGAATTGTGATATTAGATTCAGAACAAGCACCGTTAGAGGTGCACTTGCCGTGCTAA
Protein Sequence: MDINNIHVAKPEKSEESNGANEYFEIKIPLNLFQYLSAEGCDLQNLCRICLSLDNEVMFPLCSEDNSLYSNMFSNFTTLPAYFGDGLPSNICSSCQAQVVNCYEFKALCERSNYTLKSILKGEFTAKDEILDNDDYLQNLQETKKEKEVEQQNFRIEEENQDTPYLEDFGEVSNENVTRQCNSGYTNADVKDPASFSATDPKSLLDETYSVNVGSNKNSKSSYTCSFCGKNYMKLKTLRAHVKNTHKESERPYGCNQCKDTFNSEHDLKLHAALHPTGSVWKCNKCEKEFHSKSMLRRHIQRHMESKRYACETCGKLFIELYALRRHMRVHTGELVEKKYKCHLCDKKYRWRTQLSAHVSRHAGARPCACACGKAFSTPRLLASHQRVHDDRKPHACHYCDKRFRHESTRNTHHRTHTGEKPYVCCTCGKAFIQNSNLTLHMRTHTGEKPYSCSKCWRKFSSSSTLKAHLRSHTGERPYECKICGKKFARVPLQTHMRLHTGERPHRCSACPKTFVNASRLREHAHVHTGEKPFECAICAQKFPTKSHLIKHLRTHQPQKKSKRVVVRKPEILVSNKIVISENTTIEGLKSETVRAEEIACRIVILDSEQAPLEVHLPC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00859701;
90% Identity: iTF_00859701;
80% Identity: -