Spin018147.1
Basic Information
- Insect
- Sphinx pinastri
- Gene Symbol
- clz9
- Assembly
- GCA_947568825.1
- Location
- OX387623.1:6944450-6946588[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.6e-10 6.5e-07 29.6 0.1 2 39 17 55 16 59 0.88 2 2 5.3 7.5e+03 -2.6 0.0 24 31 364 371 364 372 0.81
Sequence Information
- Coding Sequence
- atggtcagaaattacaagaaaaagggaactaggagtggagaggtggacgaacaggcaatgttaaaagctatcgatgaagttttacaaaacaaactctctttaagaaaatcagcagccaaatatggagttaATGCACAAACACTACAAAGCCGTATCAAAAAATTACGCAAAACACAAGATCTTGATAGCGAAAATCGTGTGTTCGATTCTAAATTTGCATCGCAGCAAGTTTTTACGAAAACAGAAGAGGATCTTTTGAATAAATATATCTTAGAGTGTTCTAAGATGCACTATGGACTGACATGTATCCAAGTTAAAAACCTTGCATATGAATTTGCTAAGGCCAATGAAATTAAATATCCAGCAAGTTGGGATAATAACATGATGGCGGGAGCAGATTGGTTAGCAAGTTTCCGAAAACGCCATAAGAATTTAAGTTTGCGGATACCTGAAAATACCAGCGCTGCCAGGTCATTCGGTTTTAATAAAACGGCAGTGAATGATTTCTTTAAGAACCTGGAGAATGTATACCGCAAACACAATTTTACTGCCGATCGGATTTTTAACTACGACGAATCTGGCATATCCACTGTGCTGAGCACACCGAAAATTTTGGCTGACAAAACCCAAAAACAGGTTGGTCAAATAGTGTCTGCCGAAAGAGGAGAACTGGTCACATTTGGTGGTATTATTTCAGCAAGAGGAAACACCATACCGCCATTATTCATCTTCCCTCGAGTACATTTTAAGGACCACTTCATAGAAGGTGCTCCAGAAGGCTCTTTAGGTGTAGCCTCGAGAAGTGGTTGGATAAATTCGAGCATTTTTGTTGATGTTCTAAAGCACATTCAGAAACACACCTTATGTTCGAAAGAAAATCCAATATTGCTTTTATGTGACAACCATGAAAGTCACATTTCTATTGATGCAATCAACTACTGCCGTGACAATGGGATTGTGTGCCTTTCCTTTCCACCTCACACGACTCACCGCCTTCAACCATTAGATGTTGGAGTATTTGGACCACTAAAGTCTAAATTAAAAACAGCATTCAATGACTGGCACGTTTCCAACCCAGGAAAGACACTTAATATTTATAATATCCCAAAACTCACAAAGATACCTTATTTGGAGTCATTCAATGGTAGAAATATCACCAATGCATTTGAAAAAACCGGAATATGGCCTTTTAATAAGTTGATTTTCAATGATGATGATTTTGCGCCGGTTCAGGTGTATCATTCTAATCCTGTAACAAATCGTGATGAAAATACAAGAGGTGAGGAGATTGGAATACCTGGTAATGAGCTTGCTACAGTTAGTCCTGAACTTGCTGTAGTTAGTGGTGATGTTCCTGCTCGAACACCACCGATTTTGTCCAGAGATGTCTCGCCTTCATTGCTTTCACAACCTCTTACATCAACAGTGATGGATTTTGATAGCCCTGCACCATCTACTTCCAAAGTATTAAAGACGCCAGAAATGATAAGGCCTTTCCCGAAAGTTCAACGACGCATACAAACAAGAAAAGGTCGATCACTTGGAAAATCAAGGATTTTTACAGACACGCCTGAGAAGACTAGAATTGAAGACTTGGAAAAAATCAAAGAGATGAAGAGATTAGAAAAAGAACGAAAAAGTAAAGCAAGAGAAATGAAGAAAGCGTTGAGTTTATTAAATGAAGATTATGACAGATCAAGTAAACCAAAAAGGAATAAAACTAAAGAGATTGAAACAATTAGTAGCGACAGTGAAATAAATATCAGCCTAAGAGAAAGTTCTGCTTCACCTTTCGACGTGCTTGAAGAAAACGAAGAAGATGATCATGAAGAGCCTGTTGACCCTGAACATGTGAAGGATGGTGCATATGTGCTTGTAAAATTTGAAAAAAAGAAGTCTGTTATCTACTATGTCGGACATATAATCAAACACTACAGTTTGACAGAAGTAATGGTTTCATTCTTGAGGAAGAAACCAGGATCGTCTATGAAATTTGTATTTCCAGACGTTAAAGACGAAGGATCAGTAGATCTATCAGATATAGTTTTGATATTACCGGAACCTAAATCAGCTAGGACAGCTAGGACTGCTAGTATTTTAAGTTTTAACAAAGATCTCTCTTTTTATAACGTCCATTAA
- Protein Sequence
- MVRNYKKKGTRSGEVDEQAMLKAIDEVLQNKLSLRKSAAKYGVNAQTLQSRIKKLRKTQDLDSENRVFDSKFASQQVFTKTEEDLLNKYILECSKMHYGLTCIQVKNLAYEFAKANEIKYPASWDNNMMAGADWLASFRKRHKNLSLRIPENTSAARSFGFNKTAVNDFFKNLENVYRKHNFTADRIFNYDESGISTVLSTPKILADKTQKQVGQIVSAERGELVTFGGIISARGNTIPPLFIFPRVHFKDHFIEGAPEGSLGVASRSGWINSSIFVDVLKHIQKHTLCSKENPILLLCDNHESHISIDAINYCRDNGIVCLSFPPHTTHRLQPLDVGVFGPLKSKLKTAFNDWHVSNPGKTLNIYNIPKLTKIPYLESFNGRNITNAFEKTGIWPFNKLIFNDDDFAPVQVYHSNPVTNRDENTRGEEIGIPGNELATVSPELAVVSGDVPARTPPILSRDVSPSLLSQPLTSTVMDFDSPAPSTSKVLKTPEMIRPFPKVQRRIQTRKGRSLGKSRIFTDTPEKTRIEDLEKIKEMKRLEKERKSKAREMKKALSLLNEDYDRSSKPKRNKTKEIETISSDSEINISLRESSASPFDVLEENEEDDHEEPVDPEHVKDGAYVLVKFEKKKSVIYYVGHIIKHYSLTEVMVSFLRKKPGSSMKFVFPDVKDEGSVDLSDIVLILPEPKSARTARTASILSFNKDLSFYNVH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00357390;
- 90% Identity
- iTF_00859392;
- 80% Identity
- -