Basic Information

Insect: Sphenella marginata
Gene Symbol: su(Hw)
Assembly: GCA_951509765.1
Location: OX608079.1:96560278-96565662[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00019 0.029 16.3 2.0 1 20 131 150 131 152 0.95

2 12 9.1e-06 0.0014 20.5 0.3 3 23 203 224 201 224 0.93

3 12 0.063 9.7 8.4 0.3 1 23 230 252 230 252 0.94

4 12 8.1e-07 0.00012 23.8 1.8 1 21 259 279 259 280 0.95

5 12 8.1e-07 0.00013 23.8 1.4 2 23 292 313 291 313 0.97

6 12 8.6e-05 0.013 17.4 4.4 1 23 324 346 324 346 0.99

7 12 0.00012 0.018 17.0 0.8 1 23 352 374 352 374 0.97

8 12 7.6e-06 0.0012 20.7 0.7 1 23 380 402 380 402 0.99

9 12 2.9e-05 0.0045 18.9 1.7 1 23 408 430 408 430 0.93

10 12 2.8e-05 0.0043 18.9 3.3 1 23 434 456 434 456 0.98

11 12 0.15 23 7.2 0.7 1 20 458 477 458 482 0.93

12 12 0.046 7.1 8.8 0.2 3 23 511 532 509 532 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00019	0.029	16.3	2.0	1	20	131	150	131	152	0.95
2	12	9.1e-06	0.0014	20.5	0.3	3	23	203	224	201	224	0.93
3	12	0.063	9.7	8.4	0.3	1	23	230	252	230	252	0.94
4	12	8.1e-07	0.00012	23.8	1.8	1	21	259	279	259	280	0.95
5	12	8.1e-07	0.00013	23.8	1.4	2	23	292	313	291	313	0.97
6	12	8.6e-05	0.013	17.4	4.4	1	23	324	346	324	346	0.99
7	12	0.00012	0.018	17.0	0.8	1	23	352	374	352	374	0.97
8	12	7.6e-06	0.0012	20.7	0.7	1	23	380	402	380	402	0.99
9	12	2.9e-05	0.0045	18.9	1.7	1	23	408	430	408	430	0.93
10	12	2.8e-05	0.0043	18.9	3.3	1	23	434	456	434	456	0.98
11	12	0.15	23	7.2	0.7	1	20	458	477	458	482	0.93
12	12	0.046	7.1	8.8	0.2	3	23	511	532	509	532	0.94

Sequence Information

Coding Sequence: ATGGATGATACCAACATCAAGTCTAGCCCAAAGACTAAAGAGATCTTAAACAAAACGAGCCCAGGGaatacagtaaaaattttaaatgaacgTGCCTCAAAACGGACAAAACCATCTACACCCTCACCAAGCACGGCTTCAAAACATGTCAAACTTTCTATAGCTTATAACAACACTAGTCCTGAAACTACCACTGACATGGACCATTATGTGCTACAAACTATTAAAGATGAAGGGAGCGGCGCTGGTGGAGAAACAATAGCTTTCGTTTTGTCTGATCCGAATGAGAAACAAAAAGAGGTACAAAGTAATATTGAAGAACCAGCCGAGGAGTTGCAAATCAGTGACGAAGAAGATGGGGATACTGATGAAAAAACTGATATGGTAGAACACGTGTGTGGCAAATGTTACAAAACTTTTAGGCGATTTAGTGGCCTTAAAAATCATATGGAATTTTGTCGGTATGATAGCGGCTATCATTTGCGTAAagaggaaatgcaaaaaaaccTAAGCAAGATAGAAAAGGATGCTGTTACTATGGAGAATAAAgatatttgcttttgttgtggCGAAAGTTACGACACATtccatTTGGGTCATATCAATTGCCCGGATTGTCCAAAATCATTCAAATCACAAATGAGTTATGAACGTCATATATTCATTACTCACTCTGAATTCGATGACTATTCATGCTCTATATGCAATGCGAAATTGCGTAGTGAGAATTTACTTAAATTGCATGAGGATCAGCATAAAAATCGCGGCAAGCCATTTGCATGTAAAATATGTGGAAAAGATTTCACCCGTGCTTATCATCTCAAACGGCATCAAAAGTACTCATCATGCTCAGGCAGTGACGCAGATTCCATGAAATGCAAAGTATGTGACAAATCCTTCTTTCGTTTAGACAATTTGCGTGCACATCTACGACAACATCTAGGTACACATGTATCAAAGAAAACCGAATATAGATGTCCACAAtgtaaaaactgtttttacagtTTGTCAACAttaaatatacacACTCGTACACATACTGGAGAACGACCTTTCGATTGTGACTTGTGCGAAAAGAAATTTCCTTCTTTAATTGCGCTTAAGAAACATCGCCGTTACCACACTGGTGAAAAGCCATACACTTGTTCTGTGTGCAATCAGTCGTTTGCTGTCAAAGAGGTATTGAATCGACATATGAAACGGCATACGGGTGATCGACCACATAGTTGTATTGAGTGCAataaaagtttcatacaagcATCTCAGCTGCGTAACCATGCGCGTACCCATATTCTACCATACGAATGTACATTATGCcatgaaaaatttagaaagccTACTCAGCTTGAAAAACATCGAAAAATTCATGTCCATAAATGTCATGAGTGTCAGGAATTGTTTTTAACAGTGTCTGAACTGGAAGAGCATATGGTTGCTACCTCCCATAAAGCATTACTCAGGAAACGTGGAACATCCAATACACCTAAACGCCCTAGAACTCGCAAAACTACAAAACATAATCGAACCTTTTGTGCTGTATGTGATGAAGACTTCGGTACATCTAAAAATTTACAGTTTCATATACTCAAAATACACGAAGTGGATCCTGAAGACTTTGTAAATGAAATGCCGAAAACTACtagtaaagtaaaacaaaatgatGAACATGTATACAAAATCCAAGGTGGAGAGTCGaatgaaattcaaattttaagcGAAACAGAAGGTAATGCCGCTATTATGGCAGCAGGCAGTGTTAgcagcaaaaaaatttacaagaaTGGAGAAAATGGTAGCAATGGAGGTTTGGTTGTGAAGGAATTCATTGTCAGTGATACACCTGCCAGTGATGATAAAGACCGGCCAATTATACTACGCAATGAGGCTTTCACTGTTATACCCTTAGATGGAGATGGGCCAATTGAAACAGTTACTGTTGCCCCTGTTGATATATCACCTGAAGTTAAGAAAGAGCAACGTAAATCATTAACCGAAACACTAGCCGATGCTATTGAAAGCAAAGCAAGTACGACGATTGAATTAAGCGAAGAGGATATGACGTTGAAGGATAATGTAAGAAAACTATTAGACATGTTGGTAGATaacaaaacattaaagaaaTTCGGCTGGCCAAACAACACTGAAGAAAATgtACTATGCCGCGTTATTGAGAACTGTGGatacaatttatcaaaagaTGCCGAAACATATCGTGATTATGATTATGCGACTCGTATGCGTGAATACGTGAAACTGTTATTTACAGTAGTAATTCATAATGACTCCATAAAGGAATTGTTAAACAATTATCCCATTGATGAAGTTGTTGAATATGTGCTCGGTAACGATGATGATGAAGACGATGATGATCTTGACAAAGAAGAAGAACATGAGCTGATAATATCAACATAA
Protein Sequence: MDDTNIKSSPKTKEILNKTSPGNTVKILNERASKRTKPSTPSPSTASKHVKLSIAYNNTSPETTTDMDHYVLQTIKDEGSGAGGETIAFVLSDPNEKQKEVQSNIEEPAEELQISDEEDGDTDEKTDMVEHVCGKCYKTFRRFSGLKNHMEFCRYDSGYHLRKEEMQKNLSKIEKDAVTMENKDICFCCGESYDTFHLGHINCPDCPKSFKSQMSYERHIFITHSEFDDYSCSICNAKLRSENLLKLHEDQHKNRGKPFACKICGKDFTRAYHLKRHQKYSSCSGSDADSMKCKVCDKSFFRLDNLRAHLRQHLGTHVSKKTEYRCPQCKNCFYSLSTLNIHTRTHTGERPFDCDLCEKKFPSLIALKKHRRYHTGEKPYTCSVCNQSFAVKEVLNRHMKRHTGDRPHSCIECNKSFIQASQLRNHARTHILPYECTLCHEKFRKPTQLEKHRKIHVHKCHECQELFLTVSELEEHMVATSHKALLRKRGTSNTPKRPRTRKTTKHNRTFCAVCDEDFGTSKNLQFHILKIHEVDPEDFVNEMPKTTSKVKQNDEHVYKIQGGESNEIQILSETEGNAAIMAAGSVSSKKIYKNGENGSNGGLVVKEFIVSDTPASDDKDRPIILRNEAFTVIPLDGDGPIETVTVAPVDISPEVKKEQRKSLTETLADAIESKASTTIELSEEDMTLKDNVRKLLDMLVDNKTLKKFGWPNNTEENVLCRVIENCGYNLSKDAETYRDYDYATRMREYVKLLFTVVIHNDSIKELLNNYPIDEVVEYVLGNDDDEDDDDLDKEEEHELIIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00992852;
90% Identity: iTF_00992852;
80% Identity: -