Basic Information

Insect: Merzomyia westermanni
Gene Symbol: su(Hw)
Assembly: GCA_949987695.1
Location: OX465288.1:150898298-150908307[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.00019 0.032 16.3 2.0 1 20 131 150 131 152 0.95

2 12 9.1e-06 0.0015 20.5 0.3 3 23 203 224 201 224 0.93

3 12 0.063 11 8.4 0.3 1 23 230 252 230 252 0.94

4 12 8.1e-07 0.00013 23.8 1.8 1 21 259 279 259 280 0.95

5 12 8.1e-07 0.00014 23.8 1.4 2 23 292 313 291 313 0.97

6 12 8.6e-05 0.014 17.4 4.4 1 23 324 346 324 346 0.99

7 12 0.00012 0.02 17.0 0.8 1 23 352 374 352 374 0.97

8 12 7.6e-06 0.0013 20.7 0.7 1 23 380 402 380 402 0.99

9 12 2.9e-05 0.0048 18.9 1.7 1 23 408 430 408 430 0.93

10 12 3.5e-05 0.0058 18.6 3.7 1 23 434 456 434 456 0.99

11 12 0.15 25 7.2 0.7 1 20 458 477 458 482 0.93

12 12 0.071 12 8.2 0.1 3 23 511 532 509 532 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.00019	0.032	16.3	2.0	1	20	131	150	131	152	0.95
2	12	9.1e-06	0.0015	20.5	0.3	3	23	203	224	201	224	0.93
3	12	0.063	11	8.4	0.3	1	23	230	252	230	252	0.94
4	12	8.1e-07	0.00013	23.8	1.8	1	21	259	279	259	280	0.95
5	12	8.1e-07	0.00014	23.8	1.4	2	23	292	313	291	313	0.97
6	12	8.6e-05	0.014	17.4	4.4	1	23	324	346	324	346	0.99
7	12	0.00012	0.02	17.0	0.8	1	23	352	374	352	374	0.97
8	12	7.6e-06	0.0013	20.7	0.7	1	23	380	402	380	402	0.99
9	12	2.9e-05	0.0048	18.9	1.7	1	23	408	430	408	430	0.93
10	12	3.5e-05	0.0058	18.6	3.7	1	23	434	456	434	456	0.99
11	12	0.15	25	7.2	0.7	1	20	458	477	458	482	0.93
12	12	0.071	12	8.2	0.1	3	23	511	532	509	532	0.94

Sequence Information

Coding Sequence: ATGGATGACACCAAAATTAAGTCTAGCCCGAAGACTAAAGAGGCCTTAAACAAAACGAGCCCAGCAAATacggtaaaaattttaaatgaacgtGCTTCAAAACGGACAAAACCAACTGCTACCTCACCAAGCACGGCTTTCAAACATGTGAAACTTTCTATAGCTAATAACAACACTAGTCCTGAAACTACCACTGACATGGACCATTATGTGCTACAAACTATTAAAGATGAAGGGAGCGGCGTTGGTGGAGAAACAATAGCTTTCGTTTTGTCTGATCCGAATGAGAAACAAAAAGACGTACAAAGTTACATCGAAGAACCAGCGGAGGAGTTACAAATCAGTGACGAAGAAGATGGGGATACTGATGAAAAAGCTGATGTGGTGGAACATGTATGTGGCAAATGTTATAAAACTTTTAGGCGATTTAGTGGTCTTAAAAATCATATGGAATTTTGTCGTTATGATAGCGGTTATCATTTGCGTAaagatgaaatgcaaaaaaacctAGGCAAGATAGAAAAGGATGCTGTTACTATGGAGAATAAAgatatttgcttttgttgtggCGAAAGTTACGACACATttcatTTGGGTCATATCAATTGCCCGGATTGTCCAAAATCATTCAAATCACAAATGAGTTATGAGCGTCATATATTCATCACCCACTCTGAATTCGATGACTATTCATGCTCCATATGCAATGCGAAATTGCGTAGTGAGaatttactgaaattgcatgaAGATCAGCACAAAAATCGCGGCAAGCCATTTGCATGTAAAATATGTGGAAAAGATTTTACACGTGCGTATCATCTCAAACGACATCAAAAGTACTCATCATGCTCAGGCAGTGACGCAGATTCCATGAAATGCAAAGTATGCGACAAATCATTCTTTCGTTTAGACAATTTGCGTGCACATCTACGACAACATTTAGGTACACATGTATCAAAGAAAACCGAATATAGATGTCCACAatgtaaaaactgtttttacagtttgtcaactttaaatatacaCACTCGTACACATACTGGAGAGCGACCTTTCGATTGTGACTTGTGCGAAAAGAAATTTCCTTCCTTAATTGCGCTTAAGAAACATCGCCGTTACCACACTGGTGAGAAACCATACACTTGTTCTGTGTGCAATCAGTCTTTTGCTGTCAAAGAGGTATTGAATCGACATATGAAACGGCATACGGGTGATCGCCCACATAGTTGTATTGAGTGCAATAAAAGTTTCATACAAGCATCTCAGCTGCGTAATCATGCGCGTACGCATATTCTACCATACGAATGTACATTATGCCATGAGAAATTTAGAAAGCCTACTCTGCTTGAAAAACATCGAAAAACTCATGTCCATAAATGTCATGAGTGTCAGGAATTGTTTTTAACAGTGTCTGAACTGGAAGAGCATATGGTTGCTACATCTCATAAAgcGGCACTTAGGAAACGTAGAACATGCAATACACCTAAACAACCTAGAACTCGCAAAACTACAAAACGTAATCGAACCTTCTGTGCTGTATGTGATGAAGACTTTGGCACagctaaaaatttgcaatttcaTATACTGAAAATACACGAAGTGGATCCTGAAGACTTTGTAAATGAAATGCCGAAAACTACTGGCAAAGTAAGAGGAAAGAGTCAACATGTATACAAAATCCAAGGTGGGGAGTCgaacgaaattaaaattttaagtgaaacTGAAGGTAATGCCGCTATTATGGCAGCTGGCAGTGTtagcagcaaaaaaatttacaagaatAGAGAAAATGGTAGTAATGGAGGTTTGGTTGTGAAGGAATTCATTGTCAGTAATGAACCTACCGGTGATGATAAAGACCGGCCAATTATACTACGCAATGAGGCTTTCACTGTTATACCTTTAGATGGAGATGGACCTATTGAAACAGTTACTGTTGCCCCTGTTGATATATCGCCTGAAGTTAAGAAAGAGCAACGTAAATCGTTGACCGAATCACTAGCAGGCGCTATAGAAAGCAATGCAAATACGACGATTGAATTGAGCGAAGAGGATAAGACGTTGAAAGAGAATGTAAGAAAACTATTAGACATGTTGGTAGACAACAAGACATTAAAGAAATTCGGCTGGCCAAGCAACACGGAAGAAAATgttttaTGCCGCGTTATTGAGAACTGTGGATACAATTTATCAAAAGATGCCGAAACATATCGTGATTATGATTATGCAACTCGTATGCGCGAATATGTTAAACTGTTGTTCACAGTAGTAATCCATAATGACTCCATAAAGGAATTGTTAAACAACTATCCCATTGATGAAGTTGTTGAATATGTGCTCggtaatgatgatgatgaagatgATGATGATCTTGACAACGAAGAAGAACATGAACTGATAATATCAACATAA
Protein Sequence: MDDTKIKSSPKTKEALNKTSPANTVKILNERASKRTKPTATSPSTAFKHVKLSIANNNTSPETTTDMDHYVLQTIKDEGSGVGGETIAFVLSDPNEKQKDVQSYIEEPAEELQISDEEDGDTDEKADVVEHVCGKCYKTFRRFSGLKNHMEFCRYDSGYHLRKDEMQKNLGKIEKDAVTMENKDICFCCGESYDTFHLGHINCPDCPKSFKSQMSYERHIFITHSEFDDYSCSICNAKLRSENLLKLHEDQHKNRGKPFACKICGKDFTRAYHLKRHQKYSSCSGSDADSMKCKVCDKSFFRLDNLRAHLRQHLGTHVSKKTEYRCPQCKNCFYSLSTLNIHTRTHTGERPFDCDLCEKKFPSLIALKKHRRYHTGEKPYTCSVCNQSFAVKEVLNRHMKRHTGDRPHSCIECNKSFIQASQLRNHARTHILPYECTLCHEKFRKPTLLEKHRKTHVHKCHECQELFLTVSELEEHMVATSHKAALRKRRTCNTPKQPRTRKTTKRNRTFCAVCDEDFGTAKNLQFHILKIHEVDPEDFVNEMPKTTGKVRGKSQHVYKIQGGESNEIKILSETEGNAAIMAAGSVSSKKIYKNRENGSNGGLVVKEFIVSNEPTGDDKDRPIILRNEAFTVIPLDGDGPIETVTVAPVDISPEVKKEQRKSLTESLAGAIESNANTTIELSEEDKTLKENVRKLLDMLVDNKTLKKFGWPSNTEENVLCRVIENCGYNLSKDAETYRDYDYATRMREYVKLLFTVVIHNDSIKELLNNYPIDEVVEYVLGNDDDEDDDDLDNEEEHELIIST

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01358236;
90% Identity: iTF_01358236;
80% Identity: -