Smar023003.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sphenella marginata
Gene Symbol
dl
Assembly
GCA_951509765.1
Location
OX608080.1:442992-446238[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.9e-75 2.2e-71 240.8 0.0 1 169 65 234 65 234 0.99
2 2 4.9 3.7e+04 -4.0 1.2 103 127 421 445 406 452 0.53

Sequence Information

Coding Sequence
ATGTATCCAAACCAAGGCAATGCCCTAATGGGCGGCGGAACAAGCGTAAGTCCGAACGGAGAGCAAATTCAAGAACAATCGCCGCAACCAGACCAGCAGCAACAAATCAACTATAATGGTGATCATACAAAGCAACAAATCTCCTACCAACAACAAACGAATGCTAACAAGAAAATTGCCAAAAAGGCGTATGTCAAAATTGTCGAACAACCCGCTAGTAAAGCATTAAGATTTCGTTACGAATGCGAAGGTCGTTCAGCTGGTTCGATACCAGGCGTGAATTCGACACCAGAAACAAAAACTTTTCCAACAATCGAAATCATTGGCTACAAGGGACGTGCTGTAGTCGTCGTGTCTTGCGTGACCAAAGATGCTCCATATCGACCACATCCACACAATTTGGTGGGCAAGGAGGGTTGCAAGAAGGGCGTCTGCACGTTGGAAATCAACAGCGAAACAATGCGGGCCGTATTCAGCAATCTAGGAATCCAATGCGTCAAAAAGAAAGACATTGAAAGTGCACTAAAGGCGCGAGAAGACATTCGTGTGGATCCCTTCAAAACTGGGTTTTCACATCGTTTCCAACCGACAAGCATCGATCTAAACGCTGTGCGATTATGTTTTCAAGTATTTCTCAAAGGTGATATGGGACGTTTCACAGTGCCTTTGCCGCCTGTCGTCTCAGAGCCAATTTATGATAAGAAGGCAATGTCAGATCTCGTAATAAGTCGGATATGTAGCTGTTCGGCAACTGTACTGGGCAACACGAAAATCATATTACTCTGCGAGAAGGTGGCGAAGGAAGACATCGCGGTGCGATTCTTTGAGGAGAAAGATGGAGTCACCATTTGGCAAGCGTTCGGTGATTTCGAGCACAACGATGTTCACAAACAGACTGCCATTACATTTAGAACACCCAAATATCATAAGACAAACATCACGGAACCAGTTGAGGTGTACGTGCAACTACAAAGACCTTCGGATGGAGCGGTTAGTGATCCAGTTAAGTTTGAATATGTGCCGGCTGAATCGGGTAGGTATTCCTTAGAGAACTTGCGTCGTACGCTCAAACGAAAGCCCGACGAagatatatttgaagaaatattAGCCGCAGCTGGTGGGATGAAGCCAGCTGTTGTGGATGTTGTAGATTTAAATAGGCCTTCGGCAGACCCACGAGCAGtagaaaatcaaattttaaaaaatgcaatgGTTGTGTCAGTGGAAATGGAAATGGAAGAAGCAGATAAAAGGCGCAAGGAGGATGAAGTCGATGCAATTATAGACGAGAAAGTGAGGGAACTggaacaacaagaacaacagcaacagcaacaacagcagcaaggGCTGGTTGCACCATTGCAAGAGCCAGATATGACTCAAAAACAACAAGATCAGCTTGCACCACAGCAGGTCGAAATCGttcaacaacaactacaagctGCCCCAGTACCAAATCATGGTTTGCAACCCAAGCCAAAAGAGGTGATACTCCCTGTAccggaacaacaacaacaattatccGTCAATGATAAAATTAATGAATGGATGAAATCGAATGATCTGCAAGAAATTGAAGGCTCGCCCCCACCTGACGGCGCCGCATCCATAGCATCTATTGATGAGGATAAAGTTCTTACAGCCCTGCTAGATGAGGCGGCCGAACTAGATGAAATTTACACGCGCCATGTTATTCAGCGTGACTCTTACAACGCAAAACTTAACGAAGTGCGTGGAGCTAACTTGAAGCAAGGAATGCAAAAGACACCCATGGAAACGGAAGACAGTTTCGATGACGCCGCCACATATAGCAGCTTACAACGGGCATTCAAAAATCCGATCGATATACCATCAGATAACTTAATGCCCCCAACACCGCCGTCTTCACAACTTGCGCCAGAAGATGCACTGCACTACGATCATGTAGAGACCTTTACATTGAGCGCTGATGCCGCGCTAGCTGCTCTTGAACAGTGTCCCATATTGCCTTTGCATCAAcctttgcaacaacaaaatctcTCACCTCCACGTCCAATGCCACCGAAATATGCTTCGCCACACATGCATGTGACCGCAGCGGAGGAAGAAAAGTTGCCACCACTTCCACCTAAACGTATTCGAAAACAAGATGGCACTTTGGAAGGGAAAGATTTTGATACAAATGATCATAAATCACGCCTCCCTGCCCCCATCATAATTAGGCGAACCCCTGATCAGTCACCTCTTTCGAAAGGGTTGCCCCCAAAGCCTGACAATACAAACAATTCAAATACTTTACCAAAGCAGAAGAAACCCGGCTTCTTTTCGAAACTATTTTCTCGTCGTAAAAGTAAATCCGATTTAGCTCAAAATAGTGACGTGGGTACTATTTCCAAAGGCAACTCGCCGAATTTGAGTCGAGAGCCAAGTATTGCCCAGTTTCGTCTCAATGATGTTAGTCGTGGTTCAGTGAAATCACTGCAACCAATGTCTTTGCCGACAAGTCCCACCAAAGCTGGTGCTAAAAAGGCCGATAAGCCAAGTCGACCGGTCGGCCGTAGTGTTAGTAGTGTTTCGGGTAAACGTCCTGCTCGTTTGACTGCTGACGTCATACACATACCACTAAAGGGTGAGAGCGTCAATAGCCTGCCACAAAACGAGGCCTACTCTCATGCCAGCACCTTGACATTGAGCAATACGCTGGATCGTAAAACGGTTTCGGCGCTACAATTAGCCGATATACCCATAAGCGAAGGCAACATGGAGCTTGTAGCAATAGCCGATCGTCAAAGTTTGCGCAACTTATGCGAAGGCGCATTTAATGTTCAACTCGATCCAGATGTCGACCTAACCGAAGCAGAACATTATGCTTTGTACACCAGCATACCGCCACAGGCGACGACCAGCGAGTTTGACGAAGCTTCCGCATATTACGCAGCCGTCGATGCGGGACAAATACTGACTCCTGACGAGATAGGAAGCCTTTTGGCGGCTGCGAATTGTGTTGAATGA
Protein Sequence
MYPNQGNALMGGGTSVSPNGEQIQEQSPQPDQQQQINYNGDHTKQQISYQQQTNANKKIAKKAYVKIVEQPASKALRFRYECEGRSAGSIPGVNSTPETKTFPTIEIIGYKGRAVVVVSCVTKDAPYRPHPHNLVGKEGCKKGVCTLEINSETMRAVFSNLGIQCVKKKDIESALKAREDIRVDPFKTGFSHRFQPTSIDLNAVRLCFQVFLKGDMGRFTVPLPPVVSEPIYDKKAMSDLVISRICSCSATVLGNTKIILLCEKVAKEDIAVRFFEEKDGVTIWQAFGDFEHNDVHKQTAITFRTPKYHKTNITEPVEVYVQLQRPSDGAVSDPVKFEYVPAESGRYSLENLRRTLKRKPDEDIFEEILAAAGGMKPAVVDVVDLNRPSADPRAVENQILKNAMVVSVEMEMEEADKRRKEDEVDAIIDEKVRELEQQEQQQQQQQQQGLVAPLQEPDMTQKQQDQLAPQQVEIVQQQLQAAPVPNHGLQPKPKEVILPVPEQQQQLSVNDKINEWMKSNDLQEIEGSPPPDGAASIASIDEDKVLTALLDEAAELDEIYTRHVIQRDSYNAKLNEVRGANLKQGMQKTPMETEDSFDDAATYSSLQRAFKNPIDIPSDNLMPPTPPSSQLAPEDALHYDHVETFTLSADAALAALEQCPILPLHQPLQQQNLSPPRPMPPKYASPHMHVTAAEEEKLPPLPPKRIRKQDGTLEGKDFDTNDHKSRLPAPIIIRRTPDQSPLSKGLPPKPDNTNNSNTLPKQKKPGFFSKLFSRRKSKSDLAQNSDVGTISKGNSPNLSREPSIAQFRLNDVSRGSVKSLQPMSLPTSPTKAGAKKADKPSRPVGRSVSSVSGKRPARLTADVIHIPLKGESVNSLPQNEAYSHASTLTLSNTLDRKTVSALQLADIPISEGNMELVAIADRQSLRNLCEGAFNVQLDPDVDLTEAEHYALYTSIPPQATTSEFDEASAYYAAVDAGQILTPDEIGSLLAAANCVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00992326;
90% Identity
iTF_00992326;
80% Identity
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