Basic Information

Gene Symbol
JARID2
Assembly
GCA_943591125.1
Location
CALSBT010000041.1:1834948-1862001[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 9.7e-22 5.9e-18 66.2 0.0 6 89 1669 1750 1665 1750 0.93

Sequence Information

Coding Sequence
ATGGTGGTTTCCAAAGACTCCAAAAGAAAACGCAAGGAGTCCCCGCTCATTGAATCGTCACCAGAAATGCCAAAAAGGACAAAAGTGCAAGCGCAGAGAAAATTTGCCCAAGGCCAAAGCGCCCCAACCTCATCGTACAGCGCTGCTTTGGCGTCGTCTTCAACATCCGCCGCCGGCGTAAATTCATCGTTAAACAATTCAGGCACACATGAACCCCCAACTGAAATTCTGCCCAATAAAAGGCCCAAAACTGAAGACTTTCTAACATTCCTTTGCTTTCGTGGGACCTCAGCATTGCCTGCCCATTTAGATTTTCTCAATCAAAACACATCACAGGCACCAAAAGACGAATCTCAAGACACAAATGAAAAATCAACCGAGGACACCGAATCTTCGCCAACAACAAAGGCAAATGTGCAAAAATCAACAAGATCATCGTCAACCAAAAAGAAGGACAAAAGTGCAACAACAGTCGATGAGAGTTCAACATCGACACTTAGTGCTAAGAAAAATGAAACCAAAAAATCGGCGGCTAAGAAAAATGAAAATGAGACAAAAGATGATAAGGTTATGGCGTTTGCGGTTAGGAAGAGGGCAGAACAGTTGCCAGAGGGTAATCGTCGTGGGCGACCGCCAAAGGATAAACTAAACAAGTCCCAGGATGGCAATCGACGTTCGGTACGGAATAAAGACAATAGCAAGAGCTTTGCTGATTTGGATGATTTGGCATCGGAATTAAATGACTTGGAAGAAACAAATTCCATTGGAAGTGGTCAGGAGAAACCACCACAACAGAAGGGAAAACGAGGGAAGCTCTCCAATTCGGCTAAGAAAAAGCTGGAGGCAAGTGGTTCAGTTACATCCGAAGTGACATCCCTGCCGAATGAAAATAATAAACAAGCCCCCGAAGAACCTGTCCCGCCAGCAAAACCCACTCCCAAAGAGAAGCCAGTAATTAAAAGACCTCGCCAAAAAGAAGCTCCAATATTTGTACCGTCACCAGAGCCAACAGGCGGGGGAAGAATGACTCGACAAAGAGCTTTCTTTGAGCCTGTGAAGGTTATCCGTCATGAAGAAGAGAAAAAGGACGATGATGAAAACAACAAGGAGCCCGAGAAGGTAAAAATTCAAGAACCCTCGCTGCCAGCCGAGTCCGTTGTCGATAAAAAGGAGGACCTCACCCAGAACAGAGATGTGTTTGATTTTTCCTCCGAAGACGAACAGCCATTGGCAAAAGCTTGCAAAATGAAAAATTCCAGAGAAGCCTCCTCAAAAAAGTTAACTCCCAAAAAGCCACAGAAGTCCGCCGTGGCCCAAGGCAAAGACAGTTCTCCAAATAAAAGTGAAACTGCACAAAATTCAAAACCAGTTGAAAACGCAAAAGAGAAATCGCTTAAGAGCCAAGAAAAGCCCGAGGAAATCTCAAAGACCGAACTTAAAGAAAATGAAGAAGTCCCTAAAGTAAAAAAGGCACCTGGTCGCAAGCCCAAGAAGAAGCTTGTCGAAGATCAACCTGTTGTCCCCGAGAAGGATTCAAAAGACGCAACAGAATCAAACAATCAACAGGACAACGACGGTGACCTAAAGGTGTTGCAAAATGTTCCAGCATCGACTGCCACCACAACCCGACAAAAGAAGAGATCAATAGTCGAAACTCCGGCAGTGATTGAGCCAGAAATTCGCAACACCAGGCCAACAAGGAAGACCAAAGAAGCCGCAACCATTTACATGGGCATAATTGGTCAAAAACTTCAACTGGACGAATTCGACGATGACGAGCTGTCATTGAGCAGCTTCCCCGATCTGCCCAATGTCAAGGAAATGGAAAAAATGGAAACTGAATTGAAAAAGAACGCAGAGCACAATAAGCAATTGCAGAAACAAGCGGCCATTGAACAAGCTGAAAAACAGGATGACAAGTCAACATCACCAGCCAAGAAAGACACCGACAAGGCGCCAGCTAAAAGAGGTCGTCCGCCAAAAAACGCTACAGCGAAAGCCGGCGCGGCCGCAAAACAGAAACTCACTAAACCACTTCAAATTGAAGGAATGCTCCGCAAAAGGGAGGAGCCCAAATCACAGGACCTAAAAGACACTGAAAGGGAAGATGAAGAAGATTTTCTGCTCAATGAAGAAGTCAACGAGACCAAGAGAAAACTTGAGAAGAGTTTCAGTGATTCCGACGATGAACCATTGGCAATCAAAGTCACCAAAAGCTCCGATGATTATTCAAAGAAATCGGATAATCCCCCAATTGTTATGCCAACAATGTCCTCGAACGAAGAACGGTCTAAGGAAGTCCGGCCAGCTCCGAAAATGTTGAATCTTCTCCCGATAACAGCTCCAGCACCAACACTACAGTGCAATGTACCAACATCGTCTCATATGAACTCAAATGCACTCAAACTTGATGACAAACCAAAAATCCCAACCTCATTGTCGGCTCCGGTTCCAGCTTTCATACCCCGACAACCAACTCTCAAAACTCCTCCAGCCCAAACAACTAGCTTGCCCCCACTGCAGCCTACCATCAAATACCAAACTCCCCCAACAACATATCCTCCCCCGATCGAAGCATATCCCTCACCCAAAATCAATCCTAACTTTCTCACTCCGAAATTCGACCGGAATATCGACCGCCGCATAGTTTGTCTTGACGGATCCTCATCGCTGTCGACAATGCAAAGACCAAGCACCAGTTTTCCCTCGCCGTCTCCTGTGAAATACGATATGTCGACCCCGAAAACACCAAGCACCGCGAATGCAAAAATTCCTGTAGTTCAATCGACGATTTCGTCAAATGCGCAACCCTCGTCTGACCCCCTCAAAGATGAGATCGGAAGCATACTCGCCGCAAATCTTATGCCAAGCAAAGAAGAGTCCGGGAAAATCTTTGGAATCGCTAGCGTTAGTTTGGCGCAAAGTTCTGGGCCCGACAACACCAAATGCACGCTGGGTAAATGTGGTTCCATCCACAAACCTGTACTCGGTCCAGTAGTTCCAACTGAATCCTATTTGGGCGAACAACTCTCCAGCAAGGAACGGCGAAAAGCCAAGGTCAACATGACACACGAACAAATCCAAAAGTGGCTCATAGAATGTTCTTCGAATCCAGATGAGATTCAAGACGATTTGGACGATGATTTTGATGACAATCTCCGCCCGAATCTGTATGCAACCACTCCTCCACCAACACGGGACGACAAGGAAAGTACTTCGTTCAGTTCCTCATCAAAAACTACCCGTGATTTGGGTAAAAGTGAAAGCGCCTGGTCAGGCAAAGGTCCCTCTCTAAAAGCCACACCTGTTGTTGTTCCGAAAGATGACCAACGACCCGAAGAATGTTCCTTCTCCTCGGAGGCTGGCAACAAAGACTTGAAAGAAACTACCAAAGACTACCAGGCGACACCGCAAAAAGCAGCAGCTATGAATAAGAAAAACGACAACCTCGCAAAGTCGAAAGAGAAAATTAAAGTCGACAAGGCTAAACTAGAGAAGGAAACAAAGAAGCCTGCTGATAAAGCATCAAAAGAAGGACCCGGCCTTCAGAAAGGAGCAAAACAATCGAACTCGACAACTGCCACAGCTGCAGCCCCAACGACGTCTTCACCGCGACAGCAGAAAAAAGTCGAAGACAATAAAAAAACACCAGCAGTTAACTCGCCTGCATCTAAAGCCAGTACGCCAGCTACAACATCTAATTCGGCGAAAACTCCCAAGCGCACAACAGTCTACAATTCAAAACTCAAAGAGACCACAACCACAAGTCATAAGAAGAAAGCTCCATTTTCCTATACATTCGGTGCCTTTTCGGCAGATAACGAAAAAAGTGTGTATTCGTTCGATAAGGAAGACGACAACGACGCCAAGCTTCCCATGTCGAAGCCATTCAGGCGACAGAGTCGTCGTGAATCTCACAATGACGACTCCAACTTGCCTGATCAAATAGCTACGCAGAAAAACACCAACGCGGCCGTTGAGAAGAAACAAGAAAGCAAATCGCAAGTCATCGCTCCGGCAACTTTGGTTACGAGTCCGGAAAAAACCAAACCTACAAAAGCCATCCCGGAAAAACGCAAATCAACCGCTGATTCTACCACCGACAAACAAGCCGACAACAATGTCGGAGACTCCGATTCAGATGTGCATACATTTTATATTCCCCTGCAAGGTGCTGGAGTTGGCTCAAGTGGCGAAGACAAACCGGACATGATCCAAGGAGTTGCAGTCAAACTCGGGCGAGAAGGCCCCGAAGGACCCAATCAGAAAGTTGTGATGCATGCGACTCTAGTCACAAAATCACAAATGGGATCGAATTCTAAACCGCTACCCGATTCAATGAATGTATCGGAAATCGTCAAGAACCTTCTCAATTCCAACAATTTGCAACAAGCAAACAACAAGGATTCGGGTGTGGTTGCTCCTATAACGCCACCTACACCATTTGTCCCGACGGCAAGCAGCTCGGCTTCTGTTGCTGCGGCACCGCCGCAACAACAAACCGCAGCAGCGAATACAACAGCCGGGACCTCAGTTGGCAGCTCGAAAAGTGTACCCGTCGGCACAGTTCAGCCGAGATTCAAGTCAAACGAAGTTAGCGGCGGTGCAGCGCAGCCAAATCATGCATCAGGCTCAGGAGCATTGACTCGAGTCAATTCAAACTCGTCGCTCTTCTCCGGTTCCAATAAATCCCGTGGCCAATCAAGCAAAAAGGTCAAAGACGAACCACCCATAAAAATGTGCAATAACACTGCTTTCCCACGCCATGATGATCCCACACAAATGGTGGAAGCGCCAATTTTCAGACCGACCGAAAAAGAATTCCTCGACCCGATGGAATTCATCGATCGAATTACACCCATAGCTGCTCGATTCGGCATATGCAAGATCATACCACCGGCCAGCTTCAAGCCCGAGTGTAGAGTATCGGATGATATGCGATTTACCGCCTACAATCAGTACGTTCACAAAATGCTACATCGATGGGGTCCGAGTACAAGGGAACTGAGTGCAATTAGGAAGTATCTAGCAACACAGAGTGTTGTCATGAACCACCCGCCATGGATAGGAGGCATGGAAGTTGATCTGCCAAGACTGTATCACACCGTTCAGGAGTTGGGCGGCCTCAAGGAGGTCATCGAAAAGAAGAAGTGGACTCGAGTGGCTGAAGAAATGTGCATTCCGAAGTTAGCGCAGGACCGCGTAACAAAGCTTGACGACATTTACTGCAGGTATCTCTTGCCGTACGATACATTGTCACCAAGTGAACGTCAGAAGCTGTTTGACGAAGTTGAAGCCGATTGGTCGAAACGAGAGGCCAGAGCCAGACGGAATGCTGATAGGTTTGTTAATACCGAGAGTGTGAGCAATGAAGATGATGAAGTTTCGAGTGAAGACGATGAGGAATCGGAAGAAGAGGTTGACGGCGTGTCAATGGAGTGCATAGTCAAAGGTCGCAGCATGCCACTGAGCCAATTTTTCCGAATAGCTCGAAACACCATGTCATTGTGGTTTAAGAACCTGGAACCAACAGTAAACGAGGTGGAGGCCGAATTTTGGCGTCATGTTGCTGTGCGAGACAGCCATGTGTGTGTCCATTCCGGATCAATAGATTCCAGTGGCTGGGGATATGGTTTTCCCTCGCCCGGACCGAAAGGCAAGGGTTCTGTTTGTGCCCGTCATCCGTGGAATTTGAAAGTCTTGACCAACAACCCGGGGTCAGTGTTGCGTTCTTTAGGTCCGGTTATGGGCGTAACAGTTCCAACACTTCATGTTGGCATGCTTTTCAGTGCCTGCTGTTGGTATCGTGACCCACATGGGCTGTCATGGATTGAATATTTGCACACTGGAGCGAGCAAACTATGGTATGGCATTCCCGACGATCAGAGTGCAAATTTCCGATCGGCTCTCACCTCACTGATCCCAACTCATATTCAAAATAAGACGATTTGGCTGCCTTGCGACACGGTCATGGTTCCGCCGCATATGCTTACCGACCGGGGGGTCTCTCTGTGCCGGATCGAACAAAAGCCCGGAGAATATGTTGTCATATTTCCGAGGGCCTATACTTCGAGTGTGTCAACTGGTTATGTTGTATCGGAGAGCGTTTATTTTGCCACCAGTTCGTGGTTGGAATTGGGAAAAGATGATTTCAGAGACATTCACGAGAGCTGTGAACCCGCCATGTTTTCATTGGAGCAATTATTGTTTGCTTTGGCTTCAGATCAACGAGTCACGGTTGATGTACTCTCCCAAATGTTGCCCATGATAAATGAGGTGTTCGAAAAGGAAGTTGCGGCGAGGGAACAGCTTAAGGCTGCTGGTGTGATATCAACGGAAAAAATTCCCGCTGAAAAAACAACAAAATCGCGAAAGCAGCCCATTGCATCCATTCAATACGAATGCGACCTATGCCGAGCTAATTTGTATATATCCATGGTGAAGACCGACGAAGGCAACATCTACTGCTTGCAACATGCCCTCAAAAATCTCAACAAAGGCAACATTCAAGCCAAACAATGTAAACTCATATTCAGCTACAACATTGAAGACATTGAGAATCTTATTAAAACTTTGAAAGATCGACTAACGCAAAAGCGAACTGTTGCCAATAAGAAATCCAAGTAG
Protein Sequence
MVVSKDSKRKRKESPLIESSPEMPKRTKVQAQRKFAQGQSAPTSSYSAALASSSTSAAGVNSSLNNSGTHEPPTEILPNKRPKTEDFLTFLCFRGTSALPAHLDFLNQNTSQAPKDESQDTNEKSTEDTESSPTTKANVQKSTRSSSTKKKDKSATTVDESSTSTLSAKKNETKKSAAKKNENETKDDKVMAFAVRKRAEQLPEGNRRGRPPKDKLNKSQDGNRRSVRNKDNSKSFADLDDLASELNDLEETNSIGSGQEKPPQQKGKRGKLSNSAKKKLEASGSVTSEVTSLPNENNKQAPEEPVPPAKPTPKEKPVIKRPRQKEAPIFVPSPEPTGGGRMTRQRAFFEPVKVIRHEEEKKDDDENNKEPEKVKIQEPSLPAESVVDKKEDLTQNRDVFDFSSEDEQPLAKACKMKNSREASSKKLTPKKPQKSAVAQGKDSSPNKSETAQNSKPVENAKEKSLKSQEKPEEISKTELKENEEVPKVKKAPGRKPKKKLVEDQPVVPEKDSKDATESNNQQDNDGDLKVLQNVPASTATTTRQKKRSIVETPAVIEPEIRNTRPTRKTKEAATIYMGIIGQKLQLDEFDDDELSLSSFPDLPNVKEMEKMETELKKNAEHNKQLQKQAAIEQAEKQDDKSTSPAKKDTDKAPAKRGRPPKNATAKAGAAAKQKLTKPLQIEGMLRKREEPKSQDLKDTEREDEEDFLLNEEVNETKRKLEKSFSDSDDEPLAIKVTKSSDDYSKKSDNPPIVMPTMSSNEERSKEVRPAPKMLNLLPITAPAPTLQCNVPTSSHMNSNALKLDDKPKIPTSLSAPVPAFIPRQPTLKTPPAQTTSLPPLQPTIKYQTPPTTYPPPIEAYPSPKINPNFLTPKFDRNIDRRIVCLDGSSSLSTMQRPSTSFPSPSPVKYDMSTPKTPSTANAKIPVVQSTISSNAQPSSDPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTESYLGEQLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFDDNLRPNLYATTPPPTRDDKESTSFSSSSKTTRDLGKSESAWSGKGPSLKATPVVVPKDDQRPEECSFSSEAGNKDLKETTKDYQATPQKAAAMNKKNDNLAKSKEKIKVDKAKLEKETKKPADKASKEGPGLQKGAKQSNSTTATAAAPTTSSPRQQKKVEDNKKTPAVNSPASKASTPATTSNSAKTPKRTTVYNSKLKETTTTSHKKKAPFSYTFGAFSADNEKSVYSFDKEDDNDAKLPMSKPFRRQSRRESHNDDSNLPDQIATQKNTNAAVEKKQESKSQVIAPATLVTSPEKTKPTKAIPEKRKSTADSTTDKQADNNVGDSDSDVHTFYIPLQGAGVGSSGEDKPDMIQGVAVKLGREGPEGPNQKVVMHATLVTKSQMGSNSKPLPDSMNVSEIVKNLLNSNNLQQANNKDSGVVAPITPPTPFVPTASSSASVAAAPPQQQTAAANTTAGTSVGSSKSVPVGTVQPRFKSNEVSGGAAQPNHASGSGALTRVNSNSSLFSGSNKSRGQSSKKVKDEPPIKMCNNTAFPRHDDPTQMVEAPIFRPTEKEFLDPMEFIDRITPIAARFGICKIIPPASFKPECRVSDDMRFTAYNQYVHKMLHRWGPSTRELSAIRKYLATQSVVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWTRVAEEMCIPKLAQDRVTKLDDIYCRYLLPYDTLSPSERQKLFDEVEADWSKREARARRNADRFVNTESVSNEDDEVSSEDDEESEEEVDGVSMECIVKGRSMPLSQFFRIARNTMSLWFKNLEPTVNEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSVCARHPWNLKVLTNNPGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHIQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEYVVIFPRAYTSSVSTGYVVSESVYFATSSWLELGKDDFRDIHESCEPAMFSLEQLLFALASDQRVTVDVLSQMLPMINEVFEKEVAAREQLKAAGVISTEKIPAEKTTKSRKQPIASIQYECDLCRANLYISMVKTDEGNIYCLQHALKNLNKGNIQAKQCKLIFSYNIEDIENLIKTLKDRLTQKRTVANKKSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00664642;
90% Identity
-
80% Identity
-