Sjav010106.1
Basic Information
- Insect
- Sphaerogastrella javana
- Gene Symbol
- stc
- Assembly
- GCA_037040025.1
- Location
- JBANCZ010004348.1:2-3217[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 1.3 7.6e+04 -3.6 0.5 15 18 294 297 293 298 0.79 2 15 1.9 1.1e+05 -4.0 1.6 15 19 321 325 320 325 0.81 3 15 0.074 4.2e+03 0.5 2.3 4 11 354 361 353 362 0.91 4 15 5.5e-07 0.031 16.9 15.1 1 19 366 383 366 383 0.93 5 15 1.4e-07 0.0081 18.7 16.4 1 19 419 437 419 437 0.97 6 15 1.6 9.1e+04 -3.8 1.5 7 13 441 447 441 448 0.75 7 15 1.9e-09 0.00011 24.7 12.9 1 19 477 495 477 495 0.98 8 15 0.95 5.4e+04 -3.1 0.4 5 10 525 530 525 530 0.93 9 15 0.00016 9.2 9.0 16.2 4 19 543 558 536 558 0.88 10 15 0.054 3.1e+03 0.9 11.6 1 11 598 608 598 620 0.79 11 15 2.6e-10 1.5e-05 27.5 15.1 1 18 625 642 625 643 0.97 12 15 2 1.1e+05 -4.3 1.2 6 10 672 676 672 676 0.88 13 15 0.76 4.3e+04 -2.8 4.7 10 18 690 699 686 700 0.75 14 15 3.8e-08 0.0022 20.6 13.4 1 16 736 751 736 761 0.86 15 15 1.3e-07 0.0073 18.9 14.1 1 19 768 787 768 787 0.97
Sequence Information
- Coding Sequence
- AGCAACACCAATGCCAATCCTGGTGGAaaCTACGCACAGTCTTTTTACGGTTATACAAACTGTGATGCTGgtgcaacaggcaacagtgTACCCTATTATCCCACAACGTATCGCCATGGGTCAACCTATGGCAATAATCCATTTGCTATCACTACTCCAACAACTGGCTTCGATTTTAGCGCATCCAAGTTGCAGGCCACTGCTCCGGAATTTGTGCCGAACTTTGCCAAACTAAACCTTTCGGCAGATACGAATGCTACAGCCACAGCTGCGTCTCTGGATCcacagagcaacagcagtaagaacaataacagcaacactgCCACACAGTCAAACAGTGATACAGTCAATGGAGCAgctaatatttataatcatcatcatcatcagcagcagcagcagcagcagcaacggcaaccaACACAAAATCAGTCACAACAAAGATTATCAGTTACACCCACCGAGCCGAGGCATCCGAAGCCGCCGAGCAACAGCAGTCGTCAGCAACGTCGCAATGATTATAGAGAGGATCGCAGTGAGCGGAATGAGGACCGCTACGAACGCAAGAAgccacagaagcagcagcgtTATGACAATCATCGCAGCAACAAGCGACGCGACGACTGGAATCGTAATAGAGATCGCATAAATGGCTATTCGCGAGCCAACGAGGAGCTAGataccagcaacagcaatgacaGCGCCCAGGCCTCACctgagaaacaacaacagcagcagcaacagcatcagatCTCACCACGACGAGCGGCGGATAGTGAAAAGCTGTCGCAGCGAGAGAAACTAATGCGTGACATAGACCAGCGACGTCTGGAGTGTCTGGTGTGCGTGGAGCAAATTAAGGCTCATCATGGCACCTGGTCGTGCCAGAACTGTTACCATGTGCTGCATCTTAAGTGCACCATCACCTGGGCGAGCAGTTCAAAGTCCAATGAGGGCTGGCGTTGTCCAGCCTGCCAGAATGTGCTGCAGGAAGTGCCGCGTGATTACCTGTGCTTCTGTGGCAAACTGAAGAATCCGCCGCTGACGCGCACCGAATTGCCGCACAGCTGTGGCGAGCTTTGCTGTCGCGTGGAGGGTTGCAGCCATGCATGCACTCTGCTCTGCCATCCGGGCCCCTGTCCGCCCTGTCAGGCCAATGTGAGCcgtagctgtggctgtggaCGCACCAATAAGCTAATGCAGTGTGCCATGAAGGAGCAACTGCTGTGCGAGGCCATCTGCGATAAGCTGCTTAATTGTGGCGAACATCGCTGCCAGCAAGGCTGTCATGCGGGCAAGTGTGAGCCATGCACGGAGCAGGTGCAACAGAATTGCCATTGTGGAAAGCAGCAGCGCGAGGTTCAATGCACCAAGGAGACTCTAGACAAGCGCAATTACTCATGCAAGGAATGCTGCAGTAAACCCCTGCCCTGCGGCAATCACAAGTGCAAGGATTCATGTCACGCTGGCGCCTGTCGTCCCTGCAAGCTGAGTCCCACGCAAATCACCAGCTGTCCCTGCGGTAAGCTGCCTGTGCCAGCAGATCAGCGCGACAGCTGCCTGGATCCAGTGCCCACCTGCGACAGCATCTGCGGCAAAACGTTACGTTGCGGCAAGCCAGCGCATCCGCATCAGTGCGCCATCAAATGCCACTTGGGTCAGTGTCCACCCTGTCCCAAGCAGACGGCCGTTAAGTGCCGCTGCGGGCACATGGATCAGATGATCAAGTGCCGTCAGTTGTCGACGCGGGCGGACGATGCACGCTGCAAGCGTCGCTGCACCAAGAAACGAAGCTGTGGCAAGCACAAGTGCAATGCGGAGTGTTGCATTGACATTGATCATGCCTGTCCGCTTCCCTGCAATCGCACCTTGAGCTGCGGACGGCACAAGTGTGATCAGCCATGTCATCGCGGCAATTGTCCGCCCTGCTATCGCAGCAGCTTCGAGGAGCTGTACTGTGAGTGTGGTGCCGAAGTAATCTATCCACCGGTGCCGTGTGGCACCAAGAAGCCCCTCTGCAAGCGCCCCTGCACTCGCACCCATGGCTGCGATCATGTGCCTCAACACAACTGCCATGCGGCGGCAACGTGTCCGCCCTGCATGATGTTCACCACCAAATGGTGTCATGGTAATCACGAGCAGCGCAAGACCATTCCCTGCTCACAGGCAAGCTTCAGCTGTGGCCTGGCTTGTGGTAAGCCGCTTGCCTGCGGACGCCACAAATGCATTAAGCCTTGTCACGAGGGCGACTGTCAGCTGGCTGGCGAGGTGTGTCGTCAAAGCTGCAGCAAAGCGCGACCACAGTGCGGTCACAAATGTGCAGCACCATGCCACGATGGCGATTGTCCGGACACGCCGTGCAAAGAGGTCGTCGAGGTGCAGTGTGAGTGCGGCAATCGGAAGCAGAGTCGCAGCTGTCAGGAGCTCGCCAGGGAGCACAGCCGTATTGCCACCGCGCAGCTGGCTTCGTCCATGGCGGAAATGTCCCGAGGTAACTACATGGAACTAAGTGAAATATTGGCCCCCGTCAAGGGCAACAAATCCAATAAAACATTGGAGTGTAATGACGAATGTCGTCTGCTGGAGCGTAATCGTCGTCTGGCCATTGGTCTGCAGTCTCGAAATCCGGATGCACAGCTGAAGACGCTTACCAAATATTCGGAATTCTTGCGAGGATTTGCAAAACGTAATCCAGCGCTGACGAAGAGCGTCTATGAAACGTTGAGCGATCTGGTTAAACTGGCCAAGGAGAGCAAACAAAAGTCGAGAAGTCACTCCTTTCCCACAATGAATCGGGAGAAACGTCAACTGGTTCACGAGCTGTGCGAAGTGTTTGGCATTGAGTCCGTCTCCTATGACAAGGAGCCCAATCGCAATGTGGTGGCCACGGCTCACAAAGAGCGGtgCTGGTTACCCGCTACTAGCATCATGGAGGTGTTGAATCGCGAATCCGGACAGCGTCGTGTGCCCGTGCCCAGCAACAATGCCTGGGGCCTCAAGAAGTAG
- Protein Sequence
- SNTNANPGGNYAQSFYGYTNCDAGATGNSVPYYPTTYRHGSTYGNNPFAITTPTTGFDFSASKLQATAPEFVPNFAKLNLSADTNATATAASLDPQSNSSKNNNSNTATQSNSDTVNGAANIYNHHHHQQQQQQQQRQPTQNQSQQRLSVTPTEPRHPKPPSNSSRQQRRNDYREDRSERNEDRYERKKPQKQQRYDNHRSNKRRDDWNRNRDRINGYSRANEELDTSNSNDSAQASPEKQQQQQQQHQISPRRAADSEKLSQREKLMRDIDQRRLECLVCVEQIKAHHGTWSCQNCYHVLHLKCTITWASSSKSNEGWRCPACQNVLQEVPRDYLCFCGKLKNPPLTRTELPHSCGELCCRVEGCSHACTLLCHPGPCPPCQANVSRSCGCGRTNKLMQCAMKEQLLCEAICDKLLNCGEHRCQQGCHAGKCEPCTEQVQQNCHCGKQQREVQCTKETLDKRNYSCKECCSKPLPCGNHKCKDSCHAGACRPCKLSPTQITSCPCGKLPVPADQRDSCLDPVPTCDSICGKTLRCGKPAHPHQCAIKCHLGQCPPCPKQTAVKCRCGHMDQMIKCRQLSTRADDARCKRRCTKKRSCGKHKCNAECCIDIDHACPLPCNRTLSCGRHKCDQPCHRGNCPPCYRSSFEELYCECGAEVIYPPVPCGTKKPLCKRPCTRTHGCDHVPQHNCHAAATCPPCMMFTTKWCHGNHEQRKTIPCSQASFSCGLACGKPLACGRHKCIKPCHEGDCQLAGEVCRQSCSKARPQCGHKCAAPCHDGDCPDTPCKEVVEVQCECGNRKQSRSCQELAREHSRIATAQLASSMAEMSRGNYMELSEILAPVKGNKSNKTLECNDECRLLERNRRLAIGLQSRNPDAQLKTLTKYSEFLRGFAKRNPALTKSVYETLSDLVKLAKESKQKSRSHSFPTMNREKRQLVHELCEVFGIESVSYDKEPNRNVVATAHKERCWLPATSIMEVLNRESGQRRVPVPSNNAWGLKK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00472738;
- 90% Identity
- -
- 80% Identity
- -