Sjav017680.2


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sphaerogastrella javana
Gene Symbol
Hr39
Assembly
GCA_037040025.1
Location
JBANCZ010011825.1:1-2928[-]

Transcription Factor Domain

TF Family
SF-like
Domain
zf-C4|SF-like
PFAM
AnimalTFDB
TF Group
Zinc-Coordinating Group
Description
The ligand binding domain of nuclear receptor steroidogenic factor 1 (SF-1): SF-1, a member of the nuclear hormone receptor superfamily, is an essential regulator of endocrine development and function and is considered a master regulator of reproduction. Most nuclear receptors function as homodimer or heterodimers, however SF-1 binds to its target genes as a monomer, recognizing the variations of the DNA sequence motif, T/CCA AGGTCA. SF-1 functions cooperatively with other transcription factors to modulate gene expression. Phospholipids have been determined as potential ligands of SF-1. Like other members of the nuclear receptor (NR) superfamily of ligand-activated transcription factors, SF-1 has a central well conserved DNA binding domain (DBD), a variable N-terminal domain, a flexible hinge and a C-terminal ligand binding domain (LBD). [1, 8, 3, 11, 6, 5, 12, 10, 9, 2, 4, 7]
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.16 4.6e+03 -0.7 0.0 32 79 41 88 20 121 0.68
2 3 0.093 2.7e+03 0.1 13.2 39 159 190 322 178 347 0.57
3 3 2.5e-55 7e-51 176.6 12.7 1 292 489 774 489 775 0.81

Sequence Information

Coding Sequence
ATGCCCAATATGTCGAGCATTAAGACGGAGCAGAGTATATCACCAGGCGCAGGCACGGGAGGAGGATATCAGCTGCCGGTGAACATGTCGAcggcaacgacgacgacaacaacaacgacgcgACACAATGTCTCCGTGACGAATATCAAGTGCGAGGAAGTGGATGAGCATCTGCCGCAGACGCCGAATGGCAATCACCTGGTGCCGGTTATAGCCAGCTACAcgaatcacaatcacaatcataataatcatggCAGCAGCCTGAGAATACCACTGGGGGGTGGTGACGAGGAGGAGGATGAGTCTGATTCGGAGCCGGAGTTGGCAAACATTGAGAATCTGAAGGTGCGTAGACGCGGTGCGTCTGATAAGAATGGTCCCAGGCCCATGTCATGGGAGGGTGAGCTCAGCGAACCGGAGACGGCAGCCGGTATCGAAGTGAGCATGACCTCTGGCATGGGCGAGCAGGAACTAatggagacggagacggtGATCAAGAGTGAATCAGGCAGCGGCAATGGCGGCAACGGCAGCGCCATGTTGCAGCCCATCAAAACGGAGCTGGAGCACATAGCAGGtgaattgcaacagcagcagcagcaacagcagcaacaccaacaccaacaacagcaacaacacttacagctgcaacggcagcagcagccacatcaTCTCCAGCAACAGATTGGCGCAAAGACATACCCCAACAACAAGCTGAAACTGGCGCCCACCCAAAGTGATCCCATCAATCTGAAGTATGAGCCTAGTGCAGCCGGAACGCTCTGCGATCGCAGCAAGTCCAACAGTGGCGGCCACCTGCCCCTGCTGCCGGCTAATCCGAGTCCAGACTCTGCCATACATTCCGTCTACACGCACAGCAGTCCGTCGCAGTCGCCGCTGACATCCCGGCACGCCCCCTACACGCCTTCGCTGAGCCGGAACAACAGCGACGCATCGCATAGCAgctgctacagctacagctccgAGTTCAGTCCCACCCATTCGCCCATACAGGCTCGTCATGCGCCACCAGGCGGTGCTGCCTTGTTTCCGGGTAGTACGGCCAATGGCAGCGCCGGAGGGCTGCATCATCACAGTGTGCTGTATCGTCCCCTGAACGTGGAGGCGAACTCCTCTTCGACATCGTCGCTGCAGGAGGCACAAAATCTCAGCATGGATGCTACTCCCTTGGATGCGAGCGCTGCCCTGCCAGCATCGCCAGCGGGCATCTCACGGCAGCAGCTCATCAATTCACCGTGTCCCATTTGTGGCGATAAAATCAGTGGCTTCCACTATGGCATCTTCTCGTGCGAGTCGTGCAAGGGCTTCTTCAAGCGCACCGTGCAGAATCGCAAgaactatgtgtgtgtgcgcggcGGTCCTTGCCAGGTGAGCATCTCCACGCGCAAGAAGTGCCCCGCCTGCCGCTTCGAGAAGTGCCTGCAAAAGGGCATGAAACTGGAGGCCATACGCGAGGATCGCACCCGTGGCGGTCGTTCCACCTATCAGTGCTCCTACACATTGCCCAATTCAATGCTTAGCCCGCTGCTAAGTCCGGATcaagcggcagctgctgcagcggcggcagcagctgtggtcagtcaacagcaacaacagcagcaacaacagcagcagcaacagcagcaacaacaacaccagcagcagcagcaacatcaaacacagcatcagcaacatcaacgccTGCAACACGCACCGCTCAACGGCTTCGGCGGTGGTGGCTCCAACTCCCTGCCCGCCAGTCCCAGTCTGGGCGCCTGCATCAAGACGGAGCAAGCAGAGCCCCTCAATCATCTACAGACATCGTCGCGACCATCAAGCATTCCAGCGCTCCTGCAGGAAATCATGGATGTTGAACATCTCTGGCAATACACCGACGCAGAGTTGGCTAGAATCAATCAACCGCTGTCCTCGTTCGCCAGCAGCGGCTCGGCATCGAGCGGTGCGAGCAACGCTGGTGGTGGCGCCTCAAGCGGACATCATCATACGGCGAATCCTCAACAGATGACCAATCCACTGCTGGCCAGTGCCGGTCTGTCATCCAATGGGGAGAACGCCAATCCCGATCTAATCGCACATCTCTGCAATGTGGCCGATCATCGCCTCTACAAGATAGTCAAGTGGTGCAAAAGTCTCCCACTTTTCAAGAACATTTCGATTGATGATCAGATCTGTTTGCTCATCAATTCGTGGTGTgaactgttgctgttctcCTGCTGCTTTCGTTCCATTGACACGCCCGGAGAGATCAAAATGTCTCAAGGCAGAAAGATAACCCTGGCACAGGCCAAAACCAATGGCTTACAG
Protein Sequence
MPNMSSIKTEQSISPGAGTGGGYQLPVNMSTATTTTTTTTRHNVSVTNIKCEEVDEHLPQTPNGNHLVPVIASYTNHNHNHNNHGSSLRIPLGGGDEEEDESDSEPELANIENLKVRRRGASDKNGPRPMSWEGELSEPETAAGIEVSMTSGMGEQELMETETVIKSESGSGNGGNGSAMLQPIKTELEHIAGELQQQQQQQQQHQHQQQQQHLQLQRQQQPHHLQQQIGAKTYPNNKLKLAPTQSDPINLKYEPSAAGTLCDRSKSNSGGHLPLLPANPSPDSAIHSVYTHSSPSQSPLTSRHAPYTPSLSRNNSDASHSSCYSYSSEFSPTHSPIQARHAPPGGAALFPGSTANGSAGGLHHHSVLYRPLNVEANSSSTSSLQEAQNLSMDATPLDASAALPASPAGISRQQLINSPCPICGDKISGFHYGIFSCESCKGFFKRTVQNRKNYVCVRGGPCQVSISTRKKCPACRFEKCLQKGMKLEAIREDRTRGGRSTYQCSYTLPNSMLSPLLSPDQAAAAAAAAAAVVSQQQQQQQQQQQQQQQQQHQQQQQHQTQHQQHQRLQHAPLNGFGGGGSNSLPASPSLGACIKTEQAEPLNHLQTSSRPSSIPALLQEIMDVEHLWQYTDAELARINQPLSSFASSGSASSGASNAGGGASSGHHHTANPQQMTNPLLASAGLSSNGENANPDLIAHLCNVADHRLYKIVKWCKSLPLFKNISIDDQICLLINSWCELLLFSCCFRSIDTPGEIKMSQGRKITLAQAKTNGLQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00832218; iTF_00832200; iTF_00901533; iTF_00901550;
90% Identity
-
80% Identity
-