Sjav007423.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sphaerogastrella javana
Gene Symbol
dl
Assembly
GCA_037040025.1
Location
JBANCZ010002661.1:7310-10885[+]

Transcription Factor Domain

TF Family
RHD
Domain
RHD domain
PFAM
PF00554
TF Group
Beta-Scaffold Factors
Description
Proteins containing the Rel homology domain (RHD) are eukaryotic transcription factors. The RHD is composed of two structural domains. This is the N-terminal DNA-binding domain that is similar to that found in P53. The C-terminal domain has an immunoglobulin-like fold (See PF16179) that functions as a dimerisation domain [1-2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.3e-74 7.6e-70 236.9 0.0 1 169 47 217 47 217 0.99
2 2 0.42 9.6e+03 -1.0 0.7 111 142 620 652 605 670 0.45

Sequence Information

Coding Sequence
ATGTttccaaatcaaaataatttggcCGCTGCAGGTGCAGGCAACGAACAGAACCTCAACTACAAtggactacaacaacagcaacaagcaaccCAACAATTGTCACAGTCTGCCAAGAATGTGCGCAAGAAACCATATGTGAAAATCACGGAACAACCCGCCGGCAAAGCTCTACGTTTTCGATATGAATGCGAGGGCCGTTCCGCGGGCTCTATACCCGGTGTTAACTCTACGCCCGAGAACAAAACCTATCCGACCATCGAGATTGTTGGATACAAGGGACGcgccgttgtcgttgtttcCTGTGTTACCAAGGATACGCCATATCGTCCACATCCACACAATCTGGTAGGCAAGGAGGGCTGCAAGAAGGGCGTCTGTACGCTGGAGATCAGCAGTGAGACGATGCGTGCGGTGTTCAGTAATCTTGGCATACAGTGTGTCAAGAAGAAGGACATTGAGGCGGCCCTGAAGGCGCGTGAGGAAATACGCGTGGATCCCTTTAAGAcgGGCTTCTCGCATCGTTTTCAGCCATCGAGCATTGACCTGAACTCGGTCCGTTTGTGCTTTCAAGTATTTATGGAGAGCGAGCAAAAGGGGCGCTTCACATCGCCACTGCCGCCAGTTGTCTCGGAGCCCATATTCGATAAGAAGGCCATGTCCGATCTGGTTATATGTCGGCTGTGCAGCTGTTCGGCGAGTGTTTTGGGCAATACCCAGATCATATTGCTGTGCGAGAAGGTAGCCAAAGAGGATATCTCTGTGCGTTTCTTTGAGGAGAAAAACGGACAGACTGTATGGGAGGGATACGGTGATTTTCAGCACACGGACGTGCACAAGCAGACTGCCATAACATTTAAGACGCCGCGTTATCACTCGCTCGAAATAACAGAGCCCGCCAAGgTTTTTATACAGCTGCGTCGGCCATCGGACGGCGTTACCAGCGAGTCGTTACCCTTCGAATATGTGCCATTGGATTCAGGTAGGCATACGTTCTGGAATCTTCATCGGCATCTCAAGCGGAAGCCCGATGAAGACATCTTTCAGCAAATACTATCCATCGATACGGATGCGCAGGCGCCCAAGCGTGAGGCGCCCACGATTGAGGTTATTGATTTGAACACGCCCACCTTGGAGCAACCTACACCGCAACCAGGTTTAACACCATTCGACATGGGCAACGTGGATGCAACGGATCAGACACCGCATGACATGgaagccgcagccgcagcagctgaGGTACAGGATGAGGCCGAGGCTGTGGCAGAGCGTATGCGCACGAATCTAGAGATTGATACGATTATCGATGAAAAGGTACGCGAGTTAGAGGCATTGCAGCTCGAGCAGCAGCTGGCTGGCGTTGATCGGCCACCAGAGCCACATCCGCTCACTGCGAATGACAAGATAACCGAATGGATGAAGTCCAATGAGCTTATGCAACAGCCTCACGAGGCTAGTCCTGAGCAGGGTAGTGATGCACCAACCGATGCCACCGACGAGACGCAAATAGCAGCTGCCGCCACAGATGAGGATAAAACATTGAATGAACTACTCGAACAGGTCGCCGAGCTGGATGAGATCTATACAGATTACCGAGTGCAGCGAGATACTTATAATAATACGATGCAGAATGAGCTGCAAAATGAGCTGGAGTCCATGGATCGTCCGCCCATGCGCATGGAGGATAGTTTTGATGATGCTGCTACATATACGAGTTTACAGATAGCCTTTAAGAATCCCGTGCTCATACCAATGGATGACATTATGCCACCCACACCGCCCATGTCGCAGTGTGCGCCAGAGGATGCCCAGCACTATGATCCTGTAGAGATTAActcacagcagctgcagcaaaagcaacagcagcagcagcagcaacagcagcagcagcaactacagctTGAGCAAGAACTGCAACGTCAGCATCAACTGGACGAGGAGCACCTGGagttggctgctgctgccatgctAGCAGCGCATGAGGAAGAGAaactgccgccgctgccgcctaAGCGTTTGCGCAAACAGGATAGTAATGCCGAGAATCGTTCCATTGAGGCGAACGGCGGTCAGGACGACAATGGTGTACGTGAGAAGGCACGCCTGCCACCTCCCATTATTCATCCACGCATGGCTGATCTGCCACCGGCGCCGACCAAAAGTTTACCACAACCACCGGAGCCAAAGGCCAAGGCAAAACCGGTCAAGAATCCAAACTTTAATACGCTGCCCAGGCAAAAGAAGCCGGGCTTCTTCTCCAAAATCTTTTCGCGCCGCAAGAGCAAGCCAGAGCTCATGCAGGACAGCAACGAGAACTGTTCACGGCTCGACTCCAAGTCGACCAGTGTGACAGTCAGCCGCGAGTCTTTGGATTCGCGTGATCCACTGCGTGCCTCTCAGCGCTCGGCCAAGTCACTAAATCAAGTTAAAAACTTAGGCAATTCAAGTCCACTGAAACCCAGCGGCAATGGGAACGGCAGTAGTAGCGGTCGAAAGCTGGGCAAGACTGGCAAGCCAGTGGGTCGCAGTGTGAGCAGCGTAAGCGGCAAACGACCTGGTTATCTGAATGCAGATGTGGTGCACATACCGCTCAAGGGCGACAGCTCCAGCAGTTTGCAACAGCCGTCGCATGAGGCGTACTCCAATGCCAGCACCATCACCGTGGGCGGTCAGTTGGACAGACGTACTGCGTCCGCTTTGCAACTGGCTGAGATACCCATCAGTGAGGGCGGCATGGAGCTGGTGGCCATTGCCGATCGTCAGAGTCTGCACAATTTGGTTAGCTCCATTGAGGCGCACTTTAATGTGCAAATGGATCCCAATTTGGATCTGACCGAGGTGGAACACTTTGCGCTCTACACGAGTGTCCCGCCCCAGGCGACGGTCAGTGAATTTGATGAAACATCTGCATACTATGCGCCAGTCGATGCCGGCGAGATTTTAACGCCAGATCAAGTGGCCAAACGCTTGGCGGCAGCAaatagcagcagtaacaattag
Protein Sequence
MFPNQNNLAAAGAGNEQNLNYNGLQQQQQATQQLSQSAKNVRKKPYVKITEQPAGKALRFRYECEGRSAGSIPGVNSTPENKTYPTIEIVGYKGRAVVVVSCVTKDTPYRPHPHNLVGKEGCKKGVCTLEISSETMRAVFSNLGIQCVKKKDIEAALKAREEIRVDPFKTGFSHRFQPSSIDLNSVRLCFQVFMESEQKGRFTSPLPPVVSEPIFDKKAMSDLVICRLCSCSASVLGNTQIILLCEKVAKEDISVRFFEEKNGQTVWEGYGDFQHTDVHKQTAITFKTPRYHSLEITEPAKVFIQLRRPSDGVTSESLPFEYVPLDSGRHTFWNLHRHLKRKPDEDIFQQILSIDTDAQAPKREAPTIEVIDLNTPTLEQPTPQPGLTPFDMGNVDATDQTPHDMEAAAAAAEVQDEAEAVAERMRTNLEIDTIIDEKVRELEALQLEQQLAGVDRPPEPHPLTANDKITEWMKSNELMQQPHEASPEQGSDAPTDATDETQIAAAATDEDKTLNELLEQVAELDEIYTDYRVQRDTYNNTMQNELQNELESMDRPPMRMEDSFDDAATYTSLQIAFKNPVLIPMDDIMPPTPPMSQCAPEDAQHYDPVEINSQQLQQKQQQQQQQQQQQQLQLEQELQRQHQLDEEHLELAAAAMLAAHEEEKLPPLPPKRLRKQDSNAENRSIEANGGQDDNGVREKARLPPPIIHPRMADLPPAPTKSLPQPPEPKAKAKPVKNPNFNTLPRQKKPGFFSKIFSRRKSKPELMQDSNENCSRLDSKSTSVTVSRESLDSRDPLRASQRSAKSLNQVKNLGNSSPLKPSGNGNGSSSGRKLGKTGKPVGRSVSSVSGKRPGYLNADVVHIPLKGDSSSSLQQPSHEAYSNASTITVGGQLDRRTASALQLAEIPISEGGMELVAIADRQSLHNLVSSIEAHFNVQMDPNLDLTEVEHFALYTSVPPQATVSEFDETSAYYAPVDAGEILTPDQVAKRLAAANSSSNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00831916;
90% Identity
-
80% Identity
-