Sinv003319.1
Basic Information
- Insect
- Solenopsis invicta
- Gene Symbol
- grn
- Assembly
- GCA_016802725.1
- Location
- NC:27173542-27260191[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-19 5e-16 57.7 4.7 1 35 485 518 485 519 0.98 2 2 8.9e-18 1.8e-14 52.7 5.6 1 35 542 575 542 576 0.97
Sequence Information
- Coding Sequence
- ATGGATATGAGCAGCGAGTCGAGCACTAGGACGTGGTACGAGTCGCCTAGGTTGGATGCGCCTTCGGGGGGTACCGGCGTAGCCGGAGTGGTCGGCAACGATTACAGGGGTTACTACCCTCATGCCGGACCGACAGCGCATCACCCCGCAGCGGCCCACTACGCCCACACGAGGATGTCGAGCAGCGGCGTGTCGAGCGCTCCAGTGAGCCAGGTCTGCCGGCCGCACTTCCACGGCTCAGTACTCCATCCGTGGCTGTCCAGCAGCAGCGCGGACACCTCGAAGACGCCCTGGGGATTccccgcgacgacgacgaccacggGCGGCTCTGTGAACGACGAGAAGCCACAGAGTCCCCTGGGATCCACGCTGCCGCCCACCAGTGGAAGTTTGTCGAGTCACGGTGGCGGCGGCCACCACCTCTTCTCCTTTCCGCCGACACCGCCCAAGGACGCTACGCCCGACAGTATAACCGCCAGCACGACTTCCAGCACGAACAACAACTCTACGAGCgccaacaacaacaacagcggCAATCCTCTCTCCGGGTTGAGCGGTGGTACCACCAGTGAGTACCAAGCGGCGGTCGCTCACGCGGCGGTGATGGGCGCGTTCATGCATCACGACGCGCTGGGAGCATCCGGCGCCAGCTCGTGCGACATCAAGCCGACGGTGATGCTCGGCCATCATCACGGGGCGCCTTCGCCGCCGCATCAGCAACACAATGGCTCCAACAACGGTAGCAACGGTCACGCCGGCACGAACGGCTCGTCCGCCGGCCAGGTGAAACAGCGAGAAGGTAATAACCAATCTGGCAATGTGACGGGCAGCCAACAGGCGAGTGCCacgcaacagcagcaacaacagcaacaggACGCGTATCAGAGCAACAACGGGGTGCCggccggcggcggcggtggtggcggtggtggtggcggcggcggcggcggcggcggtggtggtggcggcagtggcagtggcggcggtggcggcggcggcggcggcgcggcctCGCCCTGTAGAGACAGTTACGCGGCCGCGACCGCGGCTGCCGTCGCAGCGGCGGCGGCCAACAGCCACCATGCCACTTCCGGCTCGCAGTACGACCCGGCCGCGAGCGCGTACAATATGTACCAGCACCTGCAGTATCCCACCACccaccatcaccatcatcatcatcacggCGCCACCTCGTCTACCGCCGCGTCGTCCCACAATCCGCACAATGGCAGTTCAGCCGCGGTCGCCGGTATTTTCGGTCACCATGCCGGCGGTGCCGGCGCCGGTAACGCAACCGGCGGCTTAACCGGCGGCCTACCCGGCGGCGCCGACTCGAAGCTGCTGGTCGGTCACGCGGCCGCGCACGGGAACACGCCGGGCTCGCCCTCCgcgcagcaacagcagcagcaaaaGCCGAGGAACAAGTCGAGGACGTCCGCCGAGGGTCGCGAGTGCGTGAATTGCGGCGCCACGTCGACACCCCTTTGGAGACGAGACGGCACTGGCCACTACCTCTGCAACGCTTGCGGGCTTTATTACAAGATGAACGGTCAGAATCGACCCCTCATCAAGCCGAAACGACGCCTGTCGCTGCAGAGTGCGGCGAGACGGGCGGGCACCAGCTGCGCCAACTGCAAGACGGCGACCACGACTCTCTGGCGGAGAAACCAGGCCGGCGAGCCAGTCTGCAACGCTTGCGGGCTCTACTACAAGTTGCACAACGTGAACCGACCGCTGACGATGAAGAAGGAGGGCATCCAAACGAGAAACAGGAAGCTCTCGTCGAAAAGCAAGAAGAAGAAGGCCGGCGGCTGCCTAGGCCTCGGTGGTGTTATGGGCGACATGATCAAGGCCAGTGGACACCTTGATCTCGACAACAAGCCCTTCCACTCAGGATTCGGATCGCCAATGGGTACGTCGCAGCATCATCACACGATGCATCCGGCGATGcagcattacatgtatcacacGGGTGTCGGCGTGGCCGGAGGTCTTCATCAAGGATTTGCGCCACCGGCGCCGCCCCCCATCCACCCGCACTCGCATTCGCATTCCCATTCTCATCACATGACGAGTCTTCAGGGTCTGCAGCTGGCGGCTACGACGAACGCAATGACCGGCTGGCGATCGGAGTACACATGA
- Protein Sequence
- MDMSSESSTRTWYESPRLDAPSGGTGVAGVVGNDYRGYYPHAGPTAHHPAAAHYAHTRMSSSGVSSAPVSQVCRPHFHGSVLHPWLSSSSADTSKTPWGFPATTTTTGGSVNDEKPQSPLGSTLPPTSGSLSSHGGGGHHLFSFPPTPPKDATPDSITASTTSSTNNNSTSANNNNSGNPLSGLSGGTTSEYQAAVAHAAVMGAFMHHDALGASGASSCDIKPTVMLGHHHGAPSPPHQQHNGSNNGSNGHAGTNGSSAGQVKQREGNNQSGNVTGSQQASATQQQQQQQQDAYQSNNGVPAGGGGGGGGGGGGGGGGGGGGGSGSGGGGGGGGGAASPCRDSYAAATAAAVAAAAANSHHATSGSQYDPAASAYNMYQHLQYPTTHHHHHHHHGATSSTAASSHNPHNGSSAAVAGIFGHHAGGAGAGNATGGLTGGLPGGADSKLLVGHAAAHGNTPGSPSAQQQQQQKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKASGHLDLDNKPFHSGFGSPMGTSQHHHTMHPAMQHYMYHTGVGVAGGLHQGFAPPAPPPIHPHSHSHSHSHHMTSLQGLQLAATTNAMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01262137;
- 90% Identity
- iTF_00417964;
- 80% Identity
- -