Basic Information

Insect: Solenopsis invicta
Gene Symbol: znf423
Assembly: GCA_016802725.1
Location: NC:11512589-11616319[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 21 6.5e-06 0.00057 19.9 1.5 1 23 145 167 145 167 0.98

2 21 0.061 5.3 7.4 4.9 1 23 173 195 173 195 0.98

3 21 1.8e-06 0.00016 21.6 2.3 1 23 201 223 201 223 0.99

4 21 0.0001 0.0092 16.1 0.2 1 23 231 253 231 253 0.99

5 21 0.0083 0.73 10.1 3.3 1 23 421 444 421 444 0.94

6 21 0.33 29 5.0 0.0 3 23 457 478 455 478 0.88

7 21 0.64 56 4.1 0.1 3 23 547 567 546 567 0.97

8 21 0.02 1.7 8.9 0.3 3 23 584 604 582 604 0.95

9 21 0.00097 0.085 13.0 0.4 1 23 613 636 613 636 0.92

10 21 1.8 1.6e+02 2.8 0.2 1 23 641 664 641 664 0.92

11 21 0.06 5.3 7.4 2.7 2 23 745 766 744 766 0.96

12 21 0.012 1.1 9.6 0.1 1 23 771 794 771 795 0.93

13 21 4 3.5e+02 1.6 0.1 2 23 860 883 859 883 0.80

14 21 2e-05 0.0018 18.3 0.8 2 23 899 921 898 921 0.96

15 21 0.022 1.9 8.7 0.9 1 23 930 953 930 953 0.93

16 21 0.72 63 4.0 1.0 2 23 961 982 960 982 0.96

17 21 0.0085 0.75 10.1 0.1 2 23 1147 1169 1146 1169 0.91

18 21 0.24 21 5.5 0.3 1 23 1180 1203 1180 1203 0.95

19 21 1.1 95 3.4 0.1 2 23 1215 1236 1214 1236 0.94

20 21 0.018 1.5 9.1 0.1 2 23 1245 1267 1244 1267 0.94

21 21 0.057 5 7.4 2.6 1 23 1274 1297 1274 1297 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	21	6.5e-06	0.00057	19.9	1.5	1	23	145	167	145	167	0.98
2	21	0.061	5.3	7.4	4.9	1	23	173	195	173	195	0.98
3	21	1.8e-06	0.00016	21.6	2.3	1	23	201	223	201	223	0.99
4	21	0.0001	0.0092	16.1	0.2	1	23	231	253	231	253	0.99
5	21	0.0083	0.73	10.1	3.3	1	23	421	444	421	444	0.94
6	21	0.33	29	5.0	0.0	3	23	457	478	455	478	0.88
7	21	0.64	56	4.1	0.1	3	23	547	567	546	567	0.97
8	21	0.02	1.7	8.9	0.3	3	23	584	604	582	604	0.95
9	21	0.00097	0.085	13.0	0.4	1	23	613	636	613	636	0.92
10	21	1.8	1.6e+02	2.8	0.2	1	23	641	664	641	664	0.92
11	21	0.06	5.3	7.4	2.7	2	23	745	766	744	766	0.96
12	21	0.012	1.1	9.6	0.1	1	23	771	794	771	795	0.93
13	21	4	3.5e+02	1.6	0.1	2	23	860	883	859	883	0.80
14	21	2e-05	0.0018	18.3	0.8	2	23	899	921	898	921	0.96
15	21	0.022	1.9	8.7	0.9	1	23	930	953	930	953	0.93
16	21	0.72	63	4.0	1.0	2	23	961	982	960	982	0.96
17	21	0.0085	0.75	10.1	0.1	2	23	1147	1169	1146	1169	0.91
18	21	0.24	21	5.5	0.3	1	23	1180	1203	1180	1203	0.95
19	21	1.1	95	3.4	0.1	2	23	1215	1236	1214	1236	0.94
20	21	0.018	1.5	9.1	0.1	2	23	1245	1267	1244	1267	0.94
21	21	0.057	5	7.4	2.6	1	23	1274	1297	1274	1297	0.97

Sequence Information

Coding Sequence: ATGTCCAGAAGGAAGCAGGCAAAGCCTCGATCACTCAAACGGGACGAAGAGTGGGACGACGGTAACGAGCAGAATGTCCTGGAGGCGGCCGAACAGGATAACGAAACGACAGCGATTAAGCAGAATgatgaggaggaagaggaagaggaagagctACAACGAGCGTTCAGCCGTCAGTCAGAAGattATCTGCAGGATGGCAGGTCAACTTCCGTCCAAGGTCCGGATTTGGAAAATCAGAATAGTCTTGACAGTGAGGCCCTAGAAACCGGAAGTTCCTCGTGGCATAGCGAGGATGGTGGACCCAACTCGCGTCGCGGAGGCGAGACGCCGTCCTCCTGCGCAACGCCGACGTCGGCCAGCTTTCCGTCAGAGCCTGAGGTCGACGCTGACGTTGGCGCCAATCCCGACGGCAATAATCCCGCCGCTCCCTATCCTTGCCAATTCTGCGACAGAACATTCCCTCGACTCAGCTATCTGAAGAAACACGAACAGAGCCATGGTGATCAGATGCCGTATCGATGCAGTTGGTGCAATAGACTGTTCAAGCACAAGCGCAGTCGCGATCGTCACGTGAAGCTGCACACCGGGGACAGGCGATATCGTTGCTCGAAATGTGAGGCCGCCTTCTCCAGAAGTGATCACTTGAAAATCCACTTGAAGACGCACGACACCGACACCCAGAGGCCTTATCAATGCACGGCTTGTACGAGAGGCTACAGCTCAGCCGCAGCCTTAACCTCGCACATGCAGTCTCACAAGAAACATCACCAATCATCGTCCTCCCAATCGGTCGGCAAGCTCCAAGACGTCGATTATGGTAGAAGAAGCGTCTCCTCGCACAGCACATCGTCACCGCCGATACCATCATCGCCGTCGCCATCGTTAAATTTTAGTCTAAACCCGAGGAACGTTCTGAAGACGTCGCAGGGCACTGGTAGCACCTCCACTACGCCGATTCTCAATTCGCCTTTGAAGTTGGCCTGCATGTACTGTACTCGCGACTCGTTCAGCTGTATGCAACAATTACAGATGCACGTGCGCACGATGCACCAGGCGATCCTTAGCGGTACAGAGAGCTTGCCGCGGCCGCCGTCTCCAAACAGAACATCGAACGAACAGCAAACAACGGTGTTCTGCTCGCGCGACAAACCTCTCGATCGCCAGGATTGCTTGAAGGACTTACGCTCGGACCGAAAATACCCGCCCGAGGAGAGAGCCGACAGGCCTGCCGGCGAACGAGATCACTATGAGAACGCATTCACTTGTAATCAATGCACCATGAAATTCTCCACCCTGGCCTGCTTGCGCGAACATTCGTTGTCGACACATCGAGTGGACGATGGTTTCAGCGCGACGATGGTGATATGTCCACTTTGTGGCATTCCGTGCACTTCGACGGCAGCCTACGCCGAACACTACGTTCTCCAACATTGCGAGAATCGTCGTCCTGCACTGACGACCGGTATAGATTACAGCGAGACGAAACTGAACGGTGGCATATACAACAATACTCCAGCGAGAGACTCTAGAATATCGAGAAGCAAGGATGTCCCGGAGGCCGCTGATCTCACGAACAAACGTCCGATTCGGCCATCCGCGGACGCCGCTGGTGCTTATACCACTGACACCCTGCTCTGTGGTCAGTGCGACGCCGCGCTCAAGGATTTTGAATCTTTTCGCGAACACGTGGCCCGCCATTTGCAAGCCGACCATCGCAATCAAGAGATATCCAACAGACAACACCTATGTCCCAAATGCGAAACCGTTTTTCCCGCACGCGAGGACATGCTAGCCCACCTGACCAAGCACTATCTGGGCCAGATCAGTAAGGAATTCGCATGCGGCGCTTGCAAGAAATTCTATCCGCATCCGGATCAACTTCAGAGACACTTGCTGGATGCCCACGCTCATCATTTGTACCGTTGCGCTCTGTGCCGGGACACGTTCGACTCCAAGGTGGCGATACAGGTCCATTTCGCGGTCAAACACAGCCAGGAGTGTCGGATCTACCGATGTAATGTATGCACGTCGTCCAACAATGAGAACTCACCGCCGGGGACTAACGCGACGCCCGGTGATGGCAGAAACTTCTTCAGAAGCGAAGCCGAAATGGCAGCTCACGTGCGTAATGTACACGCGCCTCCTCCCGTCGCGCCGTCCTTGATGAACAGCAGTCCTGTCGGTGCCATAACAAGGAGTCCGGCCTCAACGCCCGGTGTCATCGCGACGCGTTGCGTCTTCTGCGGGACTTGCTGCAGTTCGGAGCTCGAGCTTCAGCTTCACTTGGCCAGCCACTCGGCCAATCTTTATAGATGTCCCATCTGCAGAGAAGGTTTTGCGGTGGAATTCCTATTGGATCGTCACGTTGCTCAGGTTCATCATCAGGCAGTGCAAGCCGACCAGACGTCATCAGTCAGAAACAGAGAAAACGGACGTGTTCATCGACCGGTTAAAAGTCAGGAAGAAaCGAAATCTCTGAAGAGAGGCCGTTCGCCAGCTTCAAGTAACAACAATTCCCTGAATCAGCGTGACAATAATAACAAACGTTCAAATTATGGCATGAATTCCAGTCAGCAGTGCGAACTTTGCGAACGCGGTGAATTTGCGAACGAAGCTGAGTTGCAAGCACACAAGAAATTCGCCCACACGCCTTCCAAGCTTTCCAACAAGACTGTATCTTCTTTGAGCATAACGTGCGGCTATTGCGGCGAAGTCTGCCGTTCGCGAAGCGAACTGGAATCTCATACGAGGATTCAACACGCATCCAACGAGCCGGGTGGACGTCACAAGTGCAACATCTGTGATGAAGTGTGTCCGTCGGGCGCAAGTCTGGCAGAACACAAGCtccaaaaacattgcaaaattcAATTGAGCGACACGTGCGTGGTATGTCGCGGCTGTCTCACGTCAGAGAGCCAGTTCCTGGATCATGTACAAAGACACAGCCTGGAGAACGTGGATCCGCAACAACGGCTGGACAATACGCTGCCTCATCTGCCTGCGCCATGCGTCGTTTGCCGACAGACGCTGATCAGCGATCTGGAATGTCGTTTGCACGCGCGGCATCACCTACGAACATCTTCGGGATCACGTAGCGCCGGTTCCAGTCCCACCAATCCTGGTGGCAGTAAAAGCCAAAATGAAGGTTGCTGCCTGTGCCTGCGCGATTTTGCAGCCGAGGACTTTGTCAATTTACCACCCAATCCTACCAGTACAAGCGGACAGCTGCTCAGAGTTTGCAAACCATGCTACATGAGACATTCTCAGGGACTGCCTATTCTGAATTCGACAACCTATGAGCATCGGGCCAAGTACGAGACGGCTTGGCTTGCGAGCAAGGATGACCAATGTGATGAATCCAAGGACAAGTGGGAACATGAGAGAAGACTCAAGGTAGAGGATCGATCGAGGAATGAAGGAATTACGAGTAATAAACGGTGCGACGAGTGCGGTGTAAAGTTCGAAGATCCGGAAGAGGCGAAAAAACATAAGATCGCCGAGCACGAAAAGGCTGTCAGTAGTGGCTCGAATAACTATACCTGTATACAGTGTCAAGTGTCGTTTCCAACTGAAGCCAAAATTCAGCAACACGTAAAAAAAGAACACTTAGAGGCATCCAAAACATCCTTGGAGGCTCTACGGTGCCACTTGTGCTTATTCGAAGCTGCTAGTCCTATGCAACTGCAAATTCATTTAATAGAGCACACTTTCGCTGGTTGTGCTGCTCTTAGCTGTTATATCTGCCAGTCGCTCTTCACAACTCCCATTGGCCTTCAGAATCATATGCTGCAGGAGCATGGACTGGACGCGCGACCATACGATTGCTCCAAATGCACcctcaaatttttctttagcgCCGAATTGGATCACCACGTATTGACCTTCCACCGTCTAAGAGAAGAGGTTCACTCTACATTGGTCGAAAACGCTCACGAGACGAAAAGTCGCAAAGAGAAGCGCGACGGCGACACTATAACGGTGAAGAAAGAAGTGATGCAAAGAAGTGGCaaggaagaagagaaggaggaggaacaGGAGGAAGAAGAAGTAAACGTGGACGATCAAGTAGGACACAGACAACACGAGGAAACTATACAAGAGGAACAGAAGCTGAAGATAGAAATAGACAACGAGATATCCAGCAGAACGGAATCGTGA
Protein Sequence: MSRRKQAKPRSLKRDEEWDDGNEQNVLEAAEQDNETTAIKQNDEEEEEEEELQRAFSRQSEDYLQDGRSTSVQGPDLENQNSLDSEALETGSSSWHSEDGGPNSRRGGETPSSCATPTSASFPSEPEVDADVGANPDGNNPAAPYPCQFCDRTFPRLSYLKKHEQSHGDQMPYRCSWCNRLFKHKRSRDRHVKLHTGDRRYRCSKCEAAFSRSDHLKIHLKTHDTDTQRPYQCTACTRGYSSAAALTSHMQSHKKHHQSSSSQSVGKLQDVDYGRRSVSSHSTSSPPIPSSPSPSLNFSLNPRNVLKTSQGTGSTSTTPILNSPLKLACMYCTRDSFSCMQQLQMHVRTMHQAILSGTESLPRPPSPNRTSNEQQTTVFCSRDKPLDRQDCLKDLRSDRKYPPEERADRPAGERDHYENAFTCNQCTMKFSTLACLREHSLSTHRVDDGFSATMVICPLCGIPCTSTAAYAEHYVLQHCENRRPALTTGIDYSETKLNGGIYNNTPARDSRISRSKDVPEAADLTNKRPIRPSADAAGAYTTDTLLCGQCDAALKDFESFREHVARHLQADHRNQEISNRQHLCPKCETVFPAREDMLAHLTKHYLGQISKEFACGACKKFYPHPDQLQRHLLDAHAHHLYRCALCRDTFDSKVAIQVHFAVKHSQECRIYRCNVCTSSNNENSPPGTNATPGDGRNFFRSEAEMAAHVRNVHAPPPVAPSLMNSSPVGAITRSPASTPGVIATRCVFCGTCCSSELELQLHLASHSANLYRCPICREGFAVEFLLDRHVAQVHHQAVQADQTSSVRNRENGRVHRPVKSQEETKSLKRGRSPASSNNNSLNQRDNNNKRSNYGMNSSQQCELCERGEFANEAELQAHKKFAHTPSKLSNKTVSSLSITCGYCGEVCRSRSELESHTRIQHASNEPGGRHKCNICDEVCPSGASLAEHKLQKHCKIQLSDTCVVCRGCLTSESQFLDHVQRHSLENVDPQQRLDNTLPHLPAPCVVCRQTLISDLECRLHARHHLRTSSGSRSAGSSPTNPGGSKSQNEGCCLCLRDFAAEDFVNLPPNPTSTSGQLLRVCKPCYMRHSQGLPILNSTTYEHRAKYETAWLASKDDQCDESKDKWEHERRLKVEDRSRNEGITSNKRCDECGVKFEDPEEAKKHKIAEHEKAVSSGSNNYTCIQCQVSFPTEAKIQQHVKKEHLEASKTSLEALRCHLCLFEAASPMQLQIHLIEHTFAGCAALSCYICQSLFTTPIGLQNHMLQEHGLDARPYDCSKCTLKFFFSAELDHHVLTFHRLREEVHSTLVENAHETKSRKEKRDGDTITVKKEVMQRSGKEEEKEEEQEEEEVNVDDQVGHRQHEETIQEEQKLKIEIDNEISSRTES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01406753;
90% Identity: iTF_01354819;
80% Identity: -