Basic Information

Insect: Solenopsis fugax
Gene Symbol: -
Assembly: GCA_003595255.1
Location: QKQZ01055627.1:4130-6457[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0011 0.17 13.2 0.7 1 23 365 388 365 388 0.96

2 10 2.4e-06 0.00036 21.6 0.7 1 23 394 416 394 416 0.99

3 10 4.5e-07 6.7e-05 23.9 0.3 1 23 422 444 422 444 0.99

4 10 0.015 2.3 9.6 3.6 1 23 450 472 450 472 0.99

5 10 1.2e-05 0.0018 19.4 0.4 1 20 478 497 478 498 0.96

6 10 0.0063 0.95 10.9 1.9 1 23 507 527 507 527 0.97

7 10 1.3e-06 0.0002 22.4 0.5 3 23 535 555 534 555 0.98

8 10 0.00011 0.016 16.4 0.9 1 23 561 583 561 583 0.98

9 10 0.0014 0.22 12.9 3.4 1 21 589 609 589 612 0.96

10 10 0.6 90 4.6 5.7 3 23 620 641 618 641 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0011	0.17	13.2	0.7	1	23	365	388	365	388	0.96
2	10	2.4e-06	0.00036	21.6	0.7	1	23	394	416	394	416	0.99
3	10	4.5e-07	6.7e-05	23.9	0.3	1	23	422	444	422	444	0.99
4	10	0.015	2.3	9.6	3.6	1	23	450	472	450	472	0.99
5	10	1.2e-05	0.0018	19.4	0.4	1	20	478	497	478	498	0.96
6	10	0.0063	0.95	10.9	1.9	1	23	507	527	507	527	0.97
7	10	1.3e-06	0.0002	22.4	0.5	3	23	535	555	534	555	0.98
8	10	0.00011	0.016	16.4	0.9	1	23	561	583	561	583	0.98
9	10	0.0014	0.22	12.9	3.4	1	21	589	609	589	612	0.96
10	10	0.6	90	4.6	5.7	3	23	620	641	618	641	0.97

Sequence Information

Coding Sequence: ATGACCAGCATGCAGCAGCAAACGATCTCGCATAATATAACCGGGCCTGAGCAGTCACAAGAGGAAGTTCAGCTGACCGAATTGCTGCCGGTGAAGCAATCGCGTATCAAAGAAAATGTCTTCAAGGATGACGACGCGACCGACGCTTTGAGGGCGCTCATGAGTCTCTCGGGCGATTGCGACGATAGCGAAAGCTTTGACCTGCAAGACTTCAACTTCTACAAGAATATCGAACAATCGGACCGCCAGAGCAGCAAGCATCGACGAATGGATCGGAAGAGACCAACGGAAAAGATCAAGAACGGTGTTAAAAACGTGTACTtcgataaagagaaaaatagcGAGGTGGCAGAGATAAAAGTTCGTGACGACAAAAAAATTGCTCGCGCGAAAACGCTGAAGAGGAAGCTGGTGAAATCGAACAAGAAGAAAGATGAGAGTAATTATGGAACGAATGGGAAATTAACTAAGAGAGAAATCATCCAATACGATGAAGATGATGACGATGAACAATTGTATTTGGAcctggaaaaaaaagactgcTTTAAAGACGAGGTTTACGTATACAGACAGGAACCGCTGGGTTTGTCTTCGAGTTCGGAGCCAGAGGAATCAGAAGCGACCAGTCACAAGGATCTTCGAAAGAATTATCACCCCACAGATAGAAAACCGTTTGATGGAAAAGGAAAATTCGCTGGCAAGGTCTCTGACATAGATGACAAGAACGAAAAATGCAAGTCCAAGGCAGATGACATTATTGAGAAAGAAAATCCCGAAAAAGAGCTCAGATTAAAGATGGACGCCATCATTCAAGCGAATTATTTGCTGGAGCATGAGAAAAATGATGTTCTCACTTCTGGCAGAGTTAAAGTTATGGAATATATTAGTACTTCCTCTACTGCCGCCTCGTTAAACGCAAAAAATAACGATGGTTCTTTGAGTAACTCAGCAGaatcgaaaaagaaaaagaagaagaagcgaaCTGACCAAGCCAAACAGTTGAAGGATCAAGAGGATCATTACAAGGACCAAGAAAATCCTCTGAAGGAACAAGAGAATCCTCAAAAAGACGAAGAGAATTCTGAGAAGAATTTCTGCTGCGTCGTATGTGACGCGCGTTTTAAAGGCAGCGGTGGTCTACGGAATCACTACAAGGTGGTGCACGGCGCCGGACCGCTGTACAAATGCAACGATTGCGGCAAGGAATTCCCGCTGAAGGAACGCTTAAAATTGCACGTGCGCACGCACACCGGCTTCAAGCCGTACAAGTGTCCGGAGTGCAACAAGAGCTTCGCACGGGGCGGCCAGCTGGTGCAACATCGTCGTATTCACAGCCAGGACAGGCCGTACCGTTGCAAACTGTGCTCCAACACCTTCACGTGCTCGGCCAATTTGGTGCTTCACCTGAAGCGTCACAACGGCCAGAAGGATCACAAATGTAATCTGTGCGGACGTGGTTTCGTGCGTCGCGACGCCCTGAAGAAACATCTGGAGTGCTTGCATCGCGACGTCAAGTCGTTCATCTGTGCGATCTGCAACAAAACTTTCAAGGGTCATCTACCACAGCACATGAGGACACACGCGCGCGATCGCCCGCACGGCTGTGCCACGTGCGGCCAGCGATTCGCTCAGAAATCCCAACTAACCGTGCACCAAAGGACTCACTCCGGCCAGCGACCGTTTCGCTGTCTAGTCTGCTGGCAAGCTTTCGCCCATTCGACCGCCTTAAAGCTACACGTCCGACGTCACACTGGGGAACGGCCGTTCAAGTGTTCCGAGTGTAATGCCGGCTTCACTCAACTGCCACATTGGAAGAAGCACATGAAATGCATACATGGTAAAACTAATCCATACGGCTGTAAGCATTGCAAAAGCTTTTTTAGGATTAAGACCGACCTGGACAACCACGTGAAAACTTGTCACTCAGGGATGGAGACGGaagatgacgacgacgatggcTATGTCTTCAGCGGACCGGCTGGCAACTCCGAGATCGTCGAAAAGATCACTGTTACCGCGAGGTATAATCGGGTAACGGTGGGGAAGATGCGACTGCTGCTGGCGGTGCTGCTGAAGAGGATCAGTAAGCAGGAACGGTTAAGCGAGCTCGGCTTCGGCAAACGTCTCATCGACGAGGTTCTTCAGGACTCTTTGGTGTCCGCTGGTAAGGAACCGGTGTATCCAGGGAATGGTTTATCCGAGCTTGAGGCTCTCACtcgaaatttagaaatttttctgGAATGGACTGTGCCGAAGGAACACTTAGAGAAATTTCGTAAAATGAAAAAGTCGCCCGAAGAAATTCTCGAAACGCTCACAGCTACGTAA
Protein Sequence: MTSMQQQTISHNITGPEQSQEEVQLTELLPVKQSRIKENVFKDDDATDALRALMSLSGDCDDSESFDLQDFNFYKNIEQSDRQSSKHRRMDRKRPTEKIKNGVKNVYFDKEKNSEVAEIKVRDDKKIARAKTLKRKLVKSNKKKDESNYGTNGKLTKREIIQYDEDDDDEQLYLDLEKKDCFKDEVYVYRQEPLGLSSSSEPEESEATSHKDLRKNYHPTDRKPFDGKGKFAGKVSDIDDKNEKCKSKADDIIEKENPEKELRLKMDAIIQANYLLEHEKNDVLTSGRVKVMEYISTSSTAASLNAKNNDGSLSNSAESKKKKKKKRTDQAKQLKDQEDHYKDQENPLKEQENPQKDEENSEKNFCCVVCDARFKGSGGLRNHYKVVHGAGPLYKCNDCGKEFPLKERLKLHVRTHTGFKPYKCPECNKSFARGGQLVQHRRIHSQDRPYRCKLCSNTFTCSANLVLHLKRHNGQKDHKCNLCGRGFVRRDALKKHLECLHRDVKSFICAICNKTFKGHLPQHMRTHARDRPHGCATCGQRFAQKSQLTVHQRTHSGQRPFRCLVCWQAFAHSTALKLHVRRHTGERPFKCSECNAGFTQLPHWKKHMKCIHGKTNPYGCKHCKSFFRIKTDLDNHVKTCHSGMETEDDDDDGYVFSGPAGNSEIVEKITVTARYNRVTVGKMRLLLAVLLKRISKQERLSELGFGKRLIDEVLQDSLVSAGKEPVYPGNGLSELEALTRNLEIFLEWTVPKEHLEKFRKMKKSPEEILETLTAT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01355643;
90% Identity: iTF_01355643;
80% Identity: -