Basic Information

Insect: Solenopsis fugax
Gene Symbol: -
Assembly: GCA_003595255.1
Location: QKQZ01048217.1:12113-18262[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.46 69 5.0 6.4 2 23 354 376 353 376 0.96

2 18 0.038 5.7 8.4 2.2 1 23 425 447 425 447 0.97

3 18 3 4.6e+02 2.4 2.6 1 23 496 518 496 518 0.97

4 18 0.077 12 7.4 0.2 1 20 568 587 568 589 0.91

5 18 0.005 0.75 11.2 1.0 1 23 629 651 629 651 0.97

6 18 0.00071 0.11 13.8 0.8 1 23 702 724 702 724 0.95

7 18 0.0007 0.11 13.8 0.1 1 23 730 752 730 752 0.97

8 18 5.1e-05 0.0077 17.4 0.5 1 23 793 816 793 816 0.97

9 18 0.0016 0.24 12.7 1.5 1 23 822 845 822 845 0.96

10 18 1e-05 0.0015 19.6 0.4 2 23 853 875 852 875 0.97

11 18 0.00015 0.022 16.0 0.0 1 23 883 905 883 905 0.93

12 18 0.075 11 7.5 0.3 1 20 965 984 965 984 0.97

13 18 0.00056 0.085 14.2 0.1 2 23 1004 1025 1003 1025 0.97

14 18 1.2e-05 0.0018 19.4 1.2 1 23 1038 1060 1038 1060 0.98

15 18 0.00011 0.017 16.4 3.1 1 23 1082 1105 1082 1105 0.94

16 18 0.0013 0.2 13.0 1.6 2 23 1164 1186 1163 1186 0.96

17 18 0.00061 0.092 14.0 1.0 1 23 1208 1231 1208 1231 0.93

18 18 0.005 0.76 11.2 0.3 2 23 1325 1347 1325 1347 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.46	69	5.0	6.4	2	23	354	376	353	376	0.96
2	18	0.038	5.7	8.4	2.2	1	23	425	447	425	447	0.97
3	18	3	4.6e+02	2.4	2.6	1	23	496	518	496	518	0.97
4	18	0.077	12	7.4	0.2	1	20	568	587	568	589	0.91
5	18	0.005	0.75	11.2	1.0	1	23	629	651	629	651	0.97
6	18	0.00071	0.11	13.8	0.8	1	23	702	724	702	724	0.95
7	18	0.0007	0.11	13.8	0.1	1	23	730	752	730	752	0.97
8	18	5.1e-05	0.0077	17.4	0.5	1	23	793	816	793	816	0.97
9	18	0.0016	0.24	12.7	1.5	1	23	822	845	822	845	0.96
10	18	1e-05	0.0015	19.6	0.4	2	23	853	875	852	875	0.97
11	18	0.00015	0.022	16.0	0.0	1	23	883	905	883	905	0.93
12	18	0.075	11	7.5	0.3	1	20	965	984	965	984	0.97
13	18	0.00056	0.085	14.2	0.1	2	23	1004	1025	1003	1025	0.97
14	18	1.2e-05	0.0018	19.4	1.2	1	23	1038	1060	1038	1060	0.98
15	18	0.00011	0.017	16.4	3.1	1	23	1082	1105	1082	1105	0.94
16	18	0.0013	0.2	13.0	1.6	2	23	1164	1186	1163	1186	0.96
17	18	0.00061	0.092	14.0	1.0	1	23	1208	1231	1208	1231	0.93
18	18	0.005	0.76	11.2	0.3	2	23	1325	1347	1325	1347	0.94

Sequence Information

Coding Sequence: ATGGACGAGGACGTGATCGAGATCGAGAGCGTGAAGAATGTCTGCAGACTGTGCCTTTGCATGGATAGGCCTAGGTCCTCGGTGTTCGCAACGCAAGACGATGAGAAGGAGGGCTCGTCTGGTGTGCCGTTGGCCACCAAGATCCAGACCTGTCTGTCGATCCAGattttaacaACCGATAAGTTGTCCACATTGATATGCGCAAATTGCGTGAAAAACGTCAATCAATGGCATACTTACAAGGAGTCATGTCTGCGTTCTCAAGACAAGCTGCAAGAATGGCTGGCAAATCAATTGCAATCAAATCCTACGGTTATAACGATCAAGGATGAACCAATGGATTGTGATTATGAAGATAATGTAGAAATTATCTCGGAGATCACCAATTTGGAACAATCgCAGTCACCAGCTCAAGAAGTGGAAAGCAATGAATCTAATGGTGAGAAAGATGACGATTTGCAAGATGAAACAGCTGACAACGATATGCAAGATGTAACAGATAACAACGTTGTGCAAGATGTAATGGATAACAGCGATGTGCAAGATGTAACAGGTAACAACGATGTACAAGATGTAACAGGTAACAGCGATGTGCAAGATGTAATAGGTAACAGCGATGCGCAAGATGTAACAGGTAACAATGATGTGCAAGATGTAACAGGTAACAATGATGTGCAAGATGTAACAGATAATAATGATGTGCAAGATATAACTGATAACGATGCAAATGATACTAATGAAAATCCTGAACCAATTCCACTTGCTGAGACTGTGGAAGTGGAAAAGGAGACTGATAAGGAAGAAAATCAAACTAATCAGCAGGATTCTGTTGCTTTATGCTATATTAAGACCGAACCGCAAGATGAAGACGATACCGATTGTACGGTAGAATCCACGAATAGTAGTGAGTTACTGTTGAATCCCGTGACAGATGAGACAGAAGACATAGTCATGGAGGCCGATTCCACGCAGAAGTCCAACTCAGCCGGCGCACCGcctaaaaagaaatttagacGCGGGCCTCACACTCACTTCAGAGGAACACGTGTCTTTAAGCAGAAATGCACGCATTGTCAGATATTTCTGCATTCTAAGTACTCGTATATGAAGCACATGGAAAGGTTCCACAGTAAAGAAAACGGTATCGAGAATTTAGAGTCACAGAATGATGACGAAGAGATGATCGAGGATCTAGAAGATGAACTTGTCAGCATGGAGAAGGACTCACCGCTGACGCAAGTCCAACAGGACATTATTAGTCAATTAAAAACTTTCTCTTGCTATTCTTGTGAGCAGACTTTTAATGATCGACGCAGCACCCTTTCTCACATACGTCAACATTTACCGGATTTGAGGCCGTATACATGTATCGCCTGTCTGACAGAATTTCCAGATCGATCAATGTATCAATTACATTGCGGAGCTTCCTTTGAATGCGCTATGAAGATCGCCCTAGTTGTACCAAAAATCGGTAACGAGCGGTACTTCACATGCAACATGTGCTTGCGCTCAATGCACGGAAGGAAGGAGTTGCTCAGTCACTTGTCGAAACACTCTGACAAGCAATATGAGGAGATGATGGGGCCGGCGCGAGCCCCGCCCAAGCTAAAGCCGATGGCGCCGTTGCCATCCGGGAAAAACAGCGTGCCCAATAAAAACGTTGATGGATTGCCTTACAAAAACGGCGATCCGATGCATAATCATGCCTGCGACCTGTGTGGTATGATTTACCGATATCGGCCCAATATGCTTAAGCACAAGGAGATGTGTAAGCAGTTGGATCCGCAAAGCAGAACATTATACAAATGCGTACATTGTTACATGACGTTTCTTGTATTTAGTAAGTTCCATTATCACATCACATCAGAACATAAGAGGAAGGATTTTATTTGTGCCGTGTGCAGTTCCAAGTTCCGATCGCCCAGTGATTTCCTGATCCATCATGAGACCCATCGTGAGGCAGTGCAAGGTAATCAGCAAGGCAATCAGCAAATGCAGTATGATGATACTTCGCAGAATGCAGTTCAAACACCACTGAAGGAACGTAATGCTTCCGAAACAAATACCAAGTCAAGAATGAGTTCGCGAATATCAAGTCAGAAATTCAGTTGTTCGCTCTGCTCCCAGGAGTTCTCCACAAAGGCCGAGTTGAATGAGCATAAGACTCTCCATCTCAAAGTAAAGATATACTCGTGCGTTATTTGCCGCAGTATGTTCAGCAGCGCCGGTGCCTTGGAAATTCACATGAAGGATCACGGTATCGATGATCCGAACGAAAGAAATGCCAATGTCTCTTGCGTGGAATATGGCAACTTGAACGAGGACATTAGAATCGATATGAATACTAGTGCTGTTTCAGATCCTGGTACTCAAATTCACAAGTGTGGCGAGTGCGGTAAGGTGATGTCAAGTTACGCTAATCTCCGACGACATGTCAAAATCGCTCATCGAAATTCTAAGATCTATGATTGTGTTGAATGCTCGCATATGTTCATGCGTAAAGATCTATACGAGAATCACATGATGGTCAAGCACAACAACAGGAAGACAATGATACAGTGTCCGCAGTGCCCTAAGAGTTTCGTCTTCCAATCAAACTTCGCTTATCACTTCCGTACTGCTCATCTCGAAAAATCACAGACCGGTTATGCCTGCGATATCTGCGGCAAAGTCTTCGCCGAAGAAGcatctttaaaaatacacaGGGGCTGGCACAATCGCGCCAACTCGCGTTTGAGCACTCGATTTATACTGGGCAATCAGAAGTCATCTAAAAACGCGCAGAAAGAATCGAGCAATATTGAATCTGGTGAGATTTCAGAACGGCCGGCGAGAGCACGGAAATCTTTCCCTAATCCCCCACTTCAATCACCAGAGAGGACATCAGGGAATTTCCAATGTCAAGTATGCAATGATAAGTTCAACGACGTCACAGAGCTGAGGACCCACCTGTGGGACGTCCACTGTGCCCGCAACAAAGCGGAGAAAAGTTTCTCTAATGACGAACTTCAATGCGAACTCTGCACAAACATTTTCCCTGATCAAGAAACTCTGGCTTCTCATATGCGATGGCACAAGGCCAATCCGATTCTCAGTGACATACAAAAGACATTCTCCTGTGACGTATGCGGCAAATCTTATAGTTCGAAGAAGGTTCTATGGAAGCACAAGAGGCTTCACAAGGCTACCGTTGTAGCCTCATTCAAATTCCAATCTTTAGCCAGAAAACCGATGGCTACACAATTCTTGTGCAACTTCTGCCGCAAAGTCTTTTCTAGCAGCCAGTCTTTGCAGCGGCACAAACTCACCTTCCACAGTGAGCTGCAGAATCCACAGCGCCCGCACCAACAGCTGTACAACAGCAATCGAGCATCGTTTGAGGATGAGCCGAGGGCAAAACGCAAATATGAGATGATCGAAAATGACAATTCACAGGCCAAGCTTTCTCCTTTCGCCATGGACTTTGCTGGTGAGAGAAGGAAGCCGGTCATGTGTCACGTTTGCAAGAAAATGTTCCCTAACATGAGCGTGCTGTACAAGCATAAGCAAACTGTCCACAAGGCCCGTGGAAATAAAGACTCGATACCCGAATGCATACCGATGTCCACTGACGACGGCAAATTTTCGTGCAACATCTGTTTCAAGGAATTCCCTGGTCTGTCGAATCTGCGACAGCATTTCACGATCAAGCACAAAAAGACGGCAGCACAGTCCGAAGCCGGCAGCACATCGAATAATGATAGATTATCGCTTCCGACACCCGAACGACCAAGAGAAGTTCCTACCTACGAAGTGGCCTACAATAACGTAATGTACAGTTGCAAATTGTGCAAGCAGTGCCATGTCTTCAATAAGGTATCCATCATAACTCATATTACTAATGTTCACAACACAGTGTATCAGGCTGATAGCAAGACGTTCCATAGAGAGGTCAATCTGAGCACTTACGTAGTGAAGGACGCAATTGGAGCTACTTGCCCGCAATGTGACGTCAAATATCCTAACAACAGAGCTCTGAAGATACACTATGTAAAGTTCCATGAGAATGCCGATTAA
Protein Sequence: MDEDVIEIESVKNVCRLCLCMDRPRSSVFATQDDEKEGSSGVPLATKIQTCLSIQILTTDKLSTLICANCVKNVNQWHTYKESCLRSQDKLQEWLANQLQSNPTVITIKDEPMDCDYEDNVEIISEITNLEQSQSPAQEVESNESNGEKDDDLQDETADNDMQDVTDNNVVQDVMDNSDVQDVTGNNDVQDVTGNSDVQDVIGNSDAQDVTGNNDVQDVTGNNDVQDVTDNNDVQDITDNDANDTNENPEPIPLAETVEVEKETDKEENQTNQQDSVALCYIKTEPQDEDDTDCTVESTNSSELLLNPVTDETEDIVMEADSTQKSNSAGAPPKKKFRRGPHTHFRGTRVFKQKCTHCQIFLHSKYSYMKHMERFHSKENGIENLESQNDDEEMIEDLEDELVSMEKDSPLTQVQQDIISQLKTFSCYSCEQTFNDRRSTLSHIRQHLPDLRPYTCIACLTEFPDRSMYQLHCGASFECAMKIALVVPKIGNERYFTCNMCLRSMHGRKELLSHLSKHSDKQYEEMMGPARAPPKLKPMAPLPSGKNSVPNKNVDGLPYKNGDPMHNHACDLCGMIYRYRPNMLKHKEMCKQLDPQSRTLYKCVHCYMTFLVFSKFHYHITSEHKRKDFICAVCSSKFRSPSDFLIHHETHREAVQGNQQGNQQMQYDDTSQNAVQTPLKERNASETNTKSRMSSRISSQKFSCSLCSQEFSTKAELNEHKTLHLKVKIYSCVICRSMFSSAGALEIHMKDHGIDDPNERNANVSCVEYGNLNEDIRIDMNTSAVSDPGTQIHKCGECGKVMSSYANLRRHVKIAHRNSKIYDCVECSHMFMRKDLYENHMMVKHNNRKTMIQCPQCPKSFVFQSNFAYHFRTAHLEKSQTGYACDICGKVFAEEASLKIHRGWHNRANSRLSTRFILGNQKSSKNAQKESSNIESGEISERPARARKSFPNPPLQSPERTSGNFQCQVCNDKFNDVTELRTHLWDVHCARNKAEKSFSNDELQCELCTNIFPDQETLASHMRWHKANPILSDIQKTFSCDVCGKSYSSKKVLWKHKRLHKATVVASFKFQSLARKPMATQFLCNFCRKVFSSSQSLQRHKLTFHSELQNPQRPHQQLYNSNRASFEDEPRAKRKYEMIENDNSQAKLSPFAMDFAGERRKPVMCHVCKKMFPNMSVLYKHKQTVHKARGNKDSIPECIPMSTDDGKFSCNICFKEFPGLSNLRQHFTIKHKKTAAQSEAGSTSNNDRLSLPTPERPREVPTYEVAYNNVMYSCKLCKQCHVFNKVSIITHITNVHNTVYQADSKTFHREVNLSTYVVKDAIGATCPQCDVKYPNNRALKIHYVKFHENAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01355624;
90% Identity: iTF_01355624;
80% Identity: -