Basic Information

Insect: Solenopsis fugax
Gene Symbol: pita
Assembly: GCA_003595255.1
Location: QKQZ01038750.1:12306-15569[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 8.5e-05 0.013 16.7 1.3 2 23 304 325 303 325 0.97

2 11 0.00024 0.036 15.3 1.3 1 20 333 352 333 356 0.91

3 11 0.00086 0.13 13.6 2.7 1 23 398 420 398 420 0.98

4 11 5.6e-07 8.4e-05 23.6 1.5 2 23 474 495 473 495 0.97

5 11 7.1e-05 0.011 17.0 1.1 1 23 500 523 500 523 0.95

6 11 0.0001 0.015 16.5 0.2 1 23 561 583 561 583 0.97

7 11 9.6e-07 0.00015 22.9 1.7 1 23 593 615 593 615 0.96

8 11 2.2e-06 0.00033 21.7 1.2 1 23 621 643 621 643 0.99

9 11 1.1e-05 0.0017 19.5 0.2 1 23 649 671 649 671 0.98

10 11 4.5e-05 0.0068 17.6 4.5 1 23 677 699 677 699 0.98

11 11 0.0013 0.19 13.1 0.5 1 21 705 725 705 726 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	8.5e-05	0.013	16.7	1.3	2	23	304	325	303	325	0.97
2	11	0.00024	0.036	15.3	1.3	1	20	333	352	333	356	0.91
3	11	0.00086	0.13	13.6	2.7	1	23	398	420	398	420	0.98
4	11	5.6e-07	8.4e-05	23.6	1.5	2	23	474	495	473	495	0.97
5	11	7.1e-05	0.011	17.0	1.1	1	23	500	523	500	523	0.95
6	11	0.0001	0.015	16.5	0.2	1	23	561	583	561	583	0.97
7	11	9.6e-07	0.00015	22.9	1.7	1	23	593	615	593	615	0.96
8	11	2.2e-06	0.00033	21.7	1.2	1	23	621	643	621	643	0.99
9	11	1.1e-05	0.0017	19.5	0.2	1	23	649	671	649	671	0.98
10	11	4.5e-05	0.0068	17.6	4.5	1	23	677	699	677	699	0.98
11	11	0.0013	0.19	13.1	0.5	1	21	705	725	705	726	0.94

Sequence Information

Coding Sequence: ATGGCAGTCTCAAATAGTGACGCAATGGGTAGTACGGCACACGTGGAGCAGCTCGTGGGCGACGAGTGCCGCATCTGCCTCAAGTCCTGCACAGAGGCGTGCCAACTGTTTCGCGACGACGGCGGAATACCGGAGAAGCTGATGGCTATTGCCGCTGTGCAGGTAGAGGAAGGAGACGGTCTGCCAGCTGCCATCTGTTTATCTTGCAATCATCTGCTCGATGTATCCTATGACTTCCGATGTCAAATTCAGAATGCGGATATCAGACTAcgtcaaattttgaaattgcaGGTTTCATCTATGTTGCATGACAAACATCCGAAAGATGCTAtgataattaaagatattgcAGATGCTGTATCCGACGTAGTGTcttgtaaaaagaataatcaTATTATAGAACAGGATATTTATTCATCTCACGATATCGTTACCTTTGATAATACTGCAGTTCAGCCTGATGTAATTAACAATGAATCTCATATAAATCACAAGTTTATGCAAAAACCAGAAGAAAATGTAGAACTAATTGACAAGGGTATGCCATACAGTACACTTGAAGAGAATGTACATAATGTTGAAATGATGGAAGTATTATGTCATGAAACACACATGGAGGCTGCACTTGCTGATCATTCAGATCAATTATCCAGTTCAACAACAGAAGACAAATGCAAACAGGAACAGTTAATGCTACCTGAAGACAATGAAACATCAGGAAGTGTAATGGATGAAAATAGGGAAgatacaaaaattgaaattaaggATGATGTACTTTTGGAACATTTCACTGACCATGATGTTTCGAAGGAGATGACAATGTTAGGTACGGACAATCAAGATACAAAAGGCGTTGTAAACTGCAGCGATGATGAAGAGAAGCCACTCATAAGCAGGACAACCAGACAGAAGTGCCTGCATTGCATTAAATCGTTTGCGACAAGTGTAGCGTTGCAGCGACACATGAATGTGCACAAACACAAAACGAAACTGCGTTATGTGTGCGTCGTGTGCGATAAGCAGTTTTCGAACATCGACAAATTGAAAAGCCATATGCCTACATGTCATGAGACTCAGATGACAGACAGTAAAGCATTGCAGGATGATAAGAAGGCGAATAAAGTGTCGGCAAAAGTTACTAGAAGCGGCAATGTGATAGACAGCACGAGAGAGGAGAAGAAAAACTTCAAGTTTACATGCAAAGTCTGCTCGAAGCAATTCATATATCAAAAGTCATTTTTGTCTCACGCCAAAAGTCATGCCGAATACAATGTGGATATGTCGGACGACGTACTTGATCAATCAGCAAATAAGATGAGCGAGCAAAAGGAGAGGACGCCGACGTTTAAGGAAAACGAATccgaggaagaagaggaagaggaggacgaTGACGACAGTGATTTACCGATTGAAAGTCTACAGTGTACTCAGTGCGGGAAACTTTTCGCTACGAAAAGAAATCTGAAGAGGCACATCTCGACACACAGCGGCTTGAAATTCAATTGTTCTACATGCGGTAAAGGATTTTCGAGGATCGACAAGCTGAAGGATCACGAACAATCAAAACACAAAGAGGAAATATTCGGTAATACTGACGACGAGATTGATGACGAAGAAGATAATGAGAGCAAGATTAACGAGAATTCTGAAAACCGAAAGAAGgaCCGACACAACAGGCCACACAAATGCGCGCTCTGTCCAAAAGCGTTCGCACAGGCTCAATCTTTGGCAAATCATGTAGAGAGACATAAACGAGTAAAGGATACTCAGAAGCGGTTTCTCTGTGAAAAATGTAGCAAATGCTTTGCTCAGAGTGGCTCGTTGGTGGCACATATGCGCACGCACACTGGCATCAAACCATACGTATGCAATGTGTGCAGTCGTGCTTTCACCAAGAGCACGTACTTGCAACTGCACCTGAGAACTCACAGTGGTGAGAAACCGTATATCTGCCAGTACTGTAGTAGGGCGTTTGCTCGGGCCAATACTTTGGCACGGCACATCACTATGCACACTGGCGAGGCCAAATATCATTGCAACATTTGTACCAAGTCCTTCCGGCGGTTGACCTCACTGAACGAgcacacgtacacacatacTGGCCAACGGCCGTACGCGTGTAAGCTTTGCACTAAGAGATACAATAACGCCGGTTCGTTATATGCCCACACAAAGAAGTGCAAGGCACAACAGCTCTCCAGTTCGACGACGACTGCGTTTGCGGTATCCACGGCGGACAACACGCCCCAGCAAAACGACGCATCTATGCCCCAGCTGTTGATCTATTCCCAGAGGAAGCTGGTAGAAGAGGCGACTGTTGCTCAAGTTGTATCCACTCCGCAATATATGGTAACAAATGTGCACAATCAAAAAATAGTGCCCGCCAACGTAATCCAACCGTTCACGGTAGAGGACccaaatatgtataattcaaAACAGTTTAAGAACTCGTATTATGCTATTTATCCAAACATGTAA
Protein Sequence: MAVSNSDAMGSTAHVEQLVGDECRICLKSCTEACQLFRDDGGIPEKLMAIAAVQVEEGDGLPAAICLSCNHLLDVSYDFRCQIQNADIRLRQILKLQVSSMLHDKHPKDAMIIKDIADAVSDVVSCKKNNHIIEQDIYSSHDIVTFDNTAVQPDVINNESHINHKFMQKPEENVELIDKGMPYSTLEENVHNVEMMEVLCHETHMEAALADHSDQLSSSTTEDKCKQEQLMLPEDNETSGSVMDENREDTKIEIKDDVLLEHFTDHDVSKEMTMLGTDNQDTKGVVNCSDDEEKPLISRTTRQKCLHCIKSFATSVALQRHMNVHKHKTKLRYVCVVCDKQFSNIDKLKSHMPTCHETQMTDSKALQDDKKANKVSAKVTRSGNVIDSTREEKKNFKFTCKVCSKQFIYQKSFLSHAKSHAEYNVDMSDDVLDQSANKMSEQKERTPTFKENESEEEEEEEDDDDSDLPIESLQCTQCGKLFATKRNLKRHISTHSGLKFNCSTCGKGFSRIDKLKDHEQSKHKEEIFGNTDDEIDDEEDNESKINENSENRKKDRHNRPHKCALCPKAFAQAQSLANHVERHKRVKDTQKRFLCEKCSKCFAQSGSLVAHMRTHTGIKPYVCNVCSRAFTKSTYLQLHLRTHSGEKPYICQYCSRAFARANTLARHITMHTGEAKYHCNICTKSFRRLTSLNEHTYTHTGQRPYACKLCTKRYNNAGSLYAHTKKCKAQQLSSSTTTAFAVSTADNTPQQNDASMPQLLIYSQRKLVEEATVAQVVSTPQYMVTNVHNQKIVPANVIQPFTVEDPNMYNSKQFKNSYYAIYPNM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01476429;
90% Identity: iTF_01355621;
80% Identity: -