Basic Information

Insect: Sogatella furcifera
Gene Symbol: zfh1
Assembly: GCA_014356515.1
Location: chr10:10913643-10946527[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.4e-05 0.0012 19.4 1.1 1 23 152 174 152 174 0.98

2 15 0.00039 0.02 15.5 1.5 3 23 182 202 181 202 0.99

3 15 0.00045 0.023 15.3 0.2 1 23 310 332 310 332 0.98

4 15 0.76 39 5.2 0.0 2 23 339 361 338 361 0.95

5 15 1.8e-05 0.00095 19.7 4.9 1 23 386 408 386 408 0.98

6 15 0.043 2.2 9.1 0.2 3 23 442 463 441 463 0.96

7 15 0.22 12 6.9 0.9 1 23 486 509 486 509 0.96

8 15 0.0063 0.33 11.7 3.7 2 19 517 534 516 538 0.95

9 15 0.00069 0.036 14.8 3.2 1 23 544 566 544 566 0.97

10 15 0.0068 0.35 11.6 0.2 2 23 572 593 571 593 0.96

11 15 8e-06 0.00042 20.8 1.1 1 23 604 626 604 626 0.98

12 15 0.0059 0.3 11.8 0.2 3 23 634 654 632 654 0.97

13 15 1.3e-05 0.00065 20.2 0.2 1 23 660 682 660 683 0.96

14 15 0.0025 0.13 13.0 2.1 1 23 694 716 694 716 0.95

15 15 3.6e-05 0.0018 18.8 0.1 3 23 1031 1051 1029 1051 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.4e-05	0.0012	19.4	1.1	1	23	152	174	152	174	0.98
2	15	0.00039	0.02	15.5	1.5	3	23	182	202	181	202	0.99
3	15	0.00045	0.023	15.3	0.2	1	23	310	332	310	332	0.98
4	15	0.76	39	5.2	0.0	2	23	339	361	338	361	0.95
5	15	1.8e-05	0.00095	19.7	4.9	1	23	386	408	386	408	0.98
6	15	0.043	2.2	9.1	0.2	3	23	442	463	441	463	0.96
7	15	0.22	12	6.9	0.9	1	23	486	509	486	509	0.96
8	15	0.0063	0.33	11.7	3.7	2	19	517	534	516	538	0.95
9	15	0.00069	0.036	14.8	3.2	1	23	544	566	544	566	0.97
10	15	0.0068	0.35	11.6	0.2	2	23	572	593	571	593	0.96
11	15	8e-06	0.00042	20.8	1.1	1	23	604	626	604	626	0.98
12	15	0.0059	0.3	11.8	0.2	3	23	634	654	632	654	0.97
13	15	1.3e-05	0.00065	20.2	0.2	1	23	660	682	660	683	0.96
14	15	0.0025	0.13	13.0	2.1	1	23	694	716	694	716	0.95
15	15	3.6e-05	0.0018	18.8	0.1	3	23	1031	1051	1029	1051	0.96

Sequence Information

Coding Sequence: ATGTCTCTACCATCCATATTCCTATCCAACCGGTTTTTGTGCCCAGATAGTGCGGAAATGGCCGAAGTGACGGCAGGCACGTCGGGCAATATCAGCCTGGAGTGGGTGCCGGCGGGGGGCGACGTGGGCCCCCCTGGGGATGACGTTGCACAGCGTGAGGTGATTTGCGGTGACAGCGACTGGATCGCGATGACAGAGGAGGGAAACATAAAGGAGGAGGCGGAGGAGGGGGCTCAGATCAGTGTGGTTGAGGAGGTGATCACCGATGACGGCCAGGGTGTGGTGCAGGACTTTGTCGAAATACAGGTCACTGAGGAGGAGGTGGTGGCTGACGGCATGTGGGATGGTGTGCAGTCGGCCGTGGTGGTGGGCGAGACAAAAGACGCGAAAGAGGAGGATGACGTGGAGATTCCGCTGCCACAGAACCAGGACCTGTACTCGCAAATGCATCCGTATCCGTGCGACTTTTGCAGCCGTCGCTTTGCAAAAAAGTCGACGCTGATGAATCACATGATCTCGCACCAGTCTGAGCGGCCGCACGGCTGCAACCTGTGCGGTGCGCGCTATCGACGCAAATGTGACCTCGTTAATCACATGAAGATACATGCCCTAGCTCCCATACGCAGCACCGTAGATGAAGACGACGAACAAGACATTCCGCGCATTAGTCAGGTGTCAGTAGAAGGCATAAAGGGGCGTCGCAAGCGTGCCCAGTCGCTAGTGCCGAAAAAGATGAACAGCGCCAGTTTCAGTGAGGACGACATGGGCGCCGCCGAGAAAAGGGGCACCGGCCGCACCAAAATGATGAAGAAGGGCGCCGGGGGCGGCAAGAAAATGGCCGACGACATGAAACTGCTGACGGAGATGTCGCAGATGATGCGGCAGTCGGGCAAGAACCGTTGGCCCATCACCGACTCCAGTCGGCCCTACGTGTGCCAGCACTGCGGTGTGGGGTTCGCTCGTGAAAAGGCACTGGGCTCGCATGCACGCATGCACGCGGGCGACTCTCCGCTGGAGTGCGAGGTGTGTGGAGAAATGATCTGGGACCCGGCCATGATGCGCGAGCACCGGCGCACCAAGCACCCTCACCTGGCGGAGGGGGGAAGCAGCGGCGCCACCACCTCGGTCATGATAGGCAGCAGTGCCGAGGGTAACTTCTACTGCGACACCTGTGGCCAGTCCTTCCAGCGCCACGATATGCTCAAGCGGCATAGACGGACGCACGTGAAATCCGAATTGGACTCTGATGACAACAACCAGGCTGATGATGTCGAGAGTGAGAGTGTGGTGGGCGGAGGAGGAGGGGGCACGGGCACTAATTTGTGCGGCGAGTGTGGCGAGTTCTTTGAGACTGGTGTGGAGGTGCGCGCGCACATGCAGCTGTGTCATCCGGATGAGGGCGAATCCCCTTCGCACTTCAACACCAGCGCAGACTCCCAGTACGGCGCCGACCAGCACAGATGCATGTCGTGCGGCACGATATGCGACTCGGTGGACGATTTGGCCGAGCACGTGCGCCAGATGCACGGCGACAGTCCGCAGGACACAACGTGTCACCAGTGCGGCAAGGTGTGCAAGGACCGGCGCTCGCTGCTCAAGCACTCGTGGGTGCACTCGGAGAATCGCTCCTTTCCCTGTCAGGCCTGCAACAAGCGGTTTCATAGCCGGGCACGGCTTAGGCGTCATATGATGTCGCACCGTGACAAAGCGGTGACGTGTTCTGACTGCGGCGAGGAGTTTCCCGACGGCCGCGCACTGCTCAGTCACCGGCACAGCCACGCCTCCTCCAATTCGCACCCGGTGCGCTCATTTCCCTGTCACGACTGCGGAAAAACATTCGGATCGCGCAGTTCGCAACAGATCCATGTGCGTATTCACACTGGCGAGCGGCCTTATGGCTGCCGATTCTGCTGGAAGGCGTTCGCCGATGGGGGCACACTGCGCAAACATGAACGCATTCATACTGGCGAAAAGCCCTATGTGTGCCCTGTCTGTCCCAAGGCTTTCAACCAGCGGGTTGTTCTGCGCGAGCATATTCGCGCCCACCACTCTGGCTCCGACATGAAGGTGAACTCGTGCTACGAGTGCAAGGTGTGCGGCTACCTGTTCGGCTCATCGAGCGAGCTCTGTCTGCACCTGGTCCATCACAGCGACGAGAACACAGCCAAGCACCGGCTGCCCACCGTCGGCCCACGAAAGTACAAGCGCCGGCGCAAGCTGGCTCCTCACGACACCACAAACCTCATGATGAACGACGACCATGATGAGCTCAACGTAGCCGAACACGACTACTTCTCAGACACCAGCGACTCGCAGATCGAAAAGAAAAAGTACGCTCGTCGTAAGCCGAAATACGAATCTTCCATGTCCCCGCCCCCCTCCCGCCACGAGGATTTCGACGTTATGAAAGCTTGCGAATCCGCATTGGAGAATATCAACTCCATGGTTAATGAGGTCGAACAAAAGAAGCGTATGGAAAAGGTTGCCAAAAAGAATAAGTTGAAAGCTGCCAATTTGAAACAGGCACGCAACGAGAAACGAGCTAAAGCTGCCAAATTGATGAACAGCACAAGCTATGCATCCAAATACGTTGTATCACGTCCCGATGAAGAGAAATCGCCGAATGGAGATCGTGCCCGCATGAAATCAGTCTACCTCCCCTCAAGTTCCAATGAAGTAGAGGTTGAAACCGAGATAGCTGTTGATGCAATTCTGAATGGAGGCGATCCGCGAGGAGCCAATCGTCCGCGAACAAAGAACGTCACATTTAGAAACACCGAGACGGGCATGAAGGTGGAGCCGGCTGTGTTTCCCGCCAAAACTTCGCCGACCAAACCGCGAAAACCGCGCGCTAAGAAGACGAGCATGGTGAAGGAGCCGGTCCCCGCGTCGAAGATTGAGGAGAGCCAGGTGCAGGAGAACATACTGGCACTGCCCAGCATGGAGCAGGAGAACATACCGCTGAATATCAACTGTCAAGAGGAGCGAGTCGAGTGTACAGTTGTACCCAATCTTGGTTTGAATGTGAAACTAGAGCCGGTCGCTGACTGCATGGTCAAAACCGAAATCATTACCGCCGATCTACTCGCCTGTGAAATGTGCAGTGAGGTGTTCTCTGACCGCACCGACCTATTGAACCATATACGGATCCACATCTAG
Protein Sequence: MSLPSIFLSNRFLCPDSAEMAEVTAGTSGNISLEWVPAGGDVGPPGDDVAQREVICGDSDWIAMTEEGNIKEEAEEGAQISVVEEVITDDGQGVVQDFVEIQVTEEEVVADGMWDGVQSAVVVGETKDAKEEDDVEIPLPQNQDLYSQMHPYPCDFCSRRFAKKSTLMNHMISHQSERPHGCNLCGARYRRKCDLVNHMKIHALAPIRSTVDEDDEQDIPRISQVSVEGIKGRRKRAQSLVPKKMNSASFSEDDMGAAEKRGTGRTKMMKKGAGGGKKMADDMKLLTEMSQMMRQSGKNRWPITDSSRPYVCQHCGVGFAREKALGSHARMHAGDSPLECEVCGEMIWDPAMMREHRRTKHPHLAEGGSSGATTSVMIGSSAEGNFYCDTCGQSFQRHDMLKRHRRTHVKSELDSDDNNQADDVESESVVGGGGGGTGTNLCGECGEFFETGVEVRAHMQLCHPDEGESPSHFNTSADSQYGADQHRCMSCGTICDSVDDLAEHVRQMHGDSPQDTTCHQCGKVCKDRRSLLKHSWVHSENRSFPCQACNKRFHSRARLRRHMMSHRDKAVTCSDCGEEFPDGRALLSHRHSHASSNSHPVRSFPCHDCGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYVCPVCPKAFNQRVVLREHIRAHHSGSDMKVNSCYECKVCGYLFGSSSELCLHLVHHSDENTAKHRLPTVGPRKYKRRRKLAPHDTTNLMMNDDHDELNVAEHDYFSDTSDSQIEKKKYARRKPKYESSMSPPPSRHEDFDVMKACESALENINSMVNEVEQKKRMEKVAKKNKLKAANLKQARNEKRAKAAKLMNSTSYASKYVVSRPDEEKSPNGDRARMKSVYLPSSSNEVEVETEIAVDAILNGGDPRGANRPRTKNVTFRNTETGMKVEPAVFPAKTSPTKPRKPRAKKTSMVKEPVPASKIEESQVQENILALPSMEQENIPLNINCQEERVECTVVPNLGLNVKLEPVADCMVKTEIITADLLACEMCSEVFSDRTDLLNHIRIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00857878;
90% Identity: -
80% Identity: -