Basic Information

Insect: Laodelphax striatellus
Gene Symbol: zfh1
Assembly: GCA_014465815.1
Location: WOVE01037049.1:16098-40000[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.3e-05 0.0027 19.4 1.1 1 23 136 158 136 158 0.98

2 15 0.00037 0.044 15.6 1.5 3 23 166 186 165 186 0.99

3 15 0.0013 0.15 13.9 0.0 1 23 292 314 292 314 0.98

4 15 0.004 0.47 12.3 0.5 1 23 320 343 320 343 0.97

5 15 1.8e-05 0.0021 19.7 4.9 1 23 378 400 378 400 0.98

6 15 0.021 2.5 10.1 0.1 2 23 430 452 430 452 0.95

7 15 2.6 3.1e+02 3.4 2.5 1 23 476 499 476 499 0.95

8 15 0.0055 0.65 11.9 2.3 2 19 507 524 506 525 0.96

9 15 0.00066 0.078 14.8 3.2 1 23 534 556 534 556 0.97

10 15 0.0047 0.56 12.1 0.2 2 23 562 583 561 583 0.97

11 15 7.7e-06 0.00091 20.9 1.1 1 23 594 616 594 616 0.98

12 15 0.0056 0.67 11.8 0.2 3 23 624 644 622 644 0.97

13 15 1.2e-05 0.0014 20.2 0.2 1 23 650 672 650 673 0.96

14 15 0.0024 0.28 13.0 2.1 1 23 684 706 684 706 0.95

15 15 3.4e-05 0.004 18.8 0.1 3 23 1022 1042 1020 1042 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.3e-05	0.0027	19.4	1.1	1	23	136	158	136	158	0.98
2	15	0.00037	0.044	15.6	1.5	3	23	166	186	165	186	0.99
3	15	0.0013	0.15	13.9	0.0	1	23	292	314	292	314	0.98
4	15	0.004	0.47	12.3	0.5	1	23	320	343	320	343	0.97
5	15	1.8e-05	0.0021	19.7	4.9	1	23	378	400	378	400	0.98
6	15	0.021	2.5	10.1	0.1	2	23	430	452	430	452	0.95
7	15	2.6	3.1e+02	3.4	2.5	1	23	476	499	476	499	0.95
8	15	0.0055	0.65	11.9	2.3	2	19	507	524	506	525	0.96
9	15	0.00066	0.078	14.8	3.2	1	23	534	556	534	556	0.97
10	15	0.0047	0.56	12.1	0.2	2	23	562	583	561	583	0.97
11	15	7.7e-06	0.00091	20.9	1.1	1	23	594	616	594	616	0.98
12	15	0.0056	0.67	11.8	0.2	3	23	624	644	622	644	0.97
13	15	1.2e-05	0.0014	20.2	0.2	1	23	650	672	650	673	0.96
14	15	0.0024	0.28	13.0	2.1	1	23	684	706	684	706	0.95
15	15	3.4e-05	0.004	18.8	0.1	3	23	1022	1042	1020	1042	0.96

Sequence Information

Coding Sequence: ATGGCCGAGGTAACAGCCGGCTCGTCCAACATCAGTCTGGAGTGGGTGCCGGTGGGGACGGGGGGCGGGGGCGAGCCGCCCCCACAGGATGTCACACAGCGCGAGGTGATTTGCGGCGACAGCGACTGGATTGCGATGACAGAGGAGGCCGGGGGCGGCGGTGGAGTGGCGAAGGAGGAGGAGGCGGTGGTGAGCGTGGTGGAGGAGGTGATCACAGACGCCACCCAGGGCGTGGTGCAGGACTTTGTCGAGATACAGGTCACCGAGGAGGAGGTAGTCGCTGATGGCATGTGGGACGGAGTGCAGTCGGCAGTGGTGGTGGGCGAGACGAAAGACGTGAAACAGGAGGACGACGTGGAGATACCGTTGCCGGAGAACCAGGACCTCTACTCGCAAATGCATCCGTACCCGTGCGACTTCTGCAGCCGCCGCTTCGCCAAAAAGTCGACGCTGATGAATCACATGATCTCGCACCAGTCGGAGCGGCCGCACGGCTGCAACCTGTGCGGCGCACGCTACCGCCGCAAGTGTGACCTCGTCAATCACATGAAGATACACGCCCTGGCGCCCATACGCAGCACAGTCGATGATGAGGACGAAGAAGACATTCCTAGGATTAATCAGGTGTCAGTGGAAGGCATAAAGGGGCGTCGCAAACGCGCCCAGTCGCTGGTGCCGAAGAAGATGAACAGCACCAGTTTCAGCGAGGATGACATGGGGGGCGGCGATAAGAAGGGAGGCGGTCGCTCTAAAAAGGGCGGCGGTCTAGGGGGCGGCAAGAAGATGACGGATGACATGAAGCTACTAAGCAATCTGTCAGTGATGCGTCAGTCAGGCAAGCGGCATTGGCCAATCACGGACACGAGCCGTCCCTACGTGTGTCAGCAGTGCGGCGTGGGATTTGCGCGCGAAAAGGCGCTCGGCTCGCACGCACGCATGCACGCCGGCGACTCGCCGTTCGAGTGTCACGTTTGCGGAGAGATGTTCTGGGACCCCAACATGATGAAGGAGCACACACGCGTCAAGCATCCGCACGTTGAGGCCTCGTTGCGGCCCGCCGCCTCCACGTCCGTCATGATTGGCGGGCCCGCCGCCGCCTCCTCCTCCGCCTCCAATAGCGCCGAGGGCAATTTCTACTGCGACACCTGCGGACAGTCGTTTCAGCGGCATGACATGCTCAAGCGGCATAGAAGGACGCACGTGAAAACGGAGGTGGACTCGTCGGACGACGTTAACCAGCAGCAAGCGGTGTCGGGAGACGAGAGCGGTGGTGGAGGGGCGACCAATGTGTGCGGCGAGTGTGGCGAGTTCTTTGAGACGGGAGTGGAAGTGCGCGCGCACATGCAACTGTGCCATCCGGAGGCCAGTCCCCCTCCCAACCACTCCTCCTTTAACGCCAGCGGCGACTCGCATTACGGCGATCAGCACAGATGCATGTCATGCGGCCACATGTGCGACTCGATGGACGAGCTGGGCGAGCACGTGCGCGAGATGCACGGCGACAGCAACCAGGAGACGACGTGCACACAGTGCGGCAAGGTGTGCAAGGACCGGCGCTCGCTGCTCAAGCACTCGTGGCTGCACTCCGAGAACCGCTCCTTTCCCTGCCAGGCCTGCAACAAGCGCTTTCACAGTCGCGCCCGGCTTAGGCGTCACATGATGTCGCACCGCGACAAAGCCGTGCAGTGCTCGGACTGCGGCGAAGAGTTTCCCGACGGCCGCGCCCTGCTCAGTCACCGGCACAGCCACGCCACCAGCAACTCGCACCCGGTGCGCTCCTTTCCCTGTCACGACTGCGGCAAAACGTTCGGGTCACGCAGCTCGCAACAGATCCACGTGCGCATTCACACTGGGGAACGGCCCTACGGCTGCCGTTTCTGCTGGAAGGCATTTGCTGACGGAGGCACACTGCGCAAGCACGAGCGCATTCACACCGGCGAGAAGCCCTATGTGTGTCCTGTCTGTCCCAAGGCTTTCAACCAGCGGGTTGTGCTGCGCGAGCATATCAGGGCGCACCACTCTGGCACCGACATGAAGGTGAACTCGTGCTACGAGTGCAAGGTGTGCGGCTACCTGTTCGGCTCATCCAGCGAGCTGTGCCTGCATCTGGTGCACCACAGCGACGAGAACACCGCCAAGCACCGGCTGCCCACGGTCGGGCCGCGCAAGTACAAGCGCCGTCGCAAGCTGGCCCCGCACGACACCACCAACCTCATGCTCAACGACCATGCCGGCGGCGGCGACCCCTCCGAACACGACTACTTCTCCGACACCAGCGACTCCCAAATCGAAAAGAAGAAGTACGCCCGTCGCAAGACCAAGTACGGATCCATGTCGCCGCCCCCGGCCCCGCCACACGAAGAGTTCGACGTCATGAAAGCCTGCGAATCCGCCCTCGAGAACATCAACTCCATGGTCAACGAGGTCGAACAGAAGAAACGCATGGAAAAGGTCGCCAAAAAGAATAAGTTGAAAGCTGCTAACCTCAAACAAGCACGCAACGAAAAACGAGCCAAAGCTGCCAAACTGATGAACAGCACAAGCTACGCATCCAAATACGTCGTGTCACGTCCTGATGAAGACAAAACATCCCCCAACGGAGACCGCGCCCGCATGAAGTCAGTCTATCTACCTTCCAGTTCCAACGAAGTCGAAGTTGAAACCGAGATCGCTGTTGACACCATTGTGAATGGGGCTGATTCGCGTAATCGTCCACGAACAAAAAACGTCACATTCAGAAACACCGACACTGGTCTCAAGATTGAACCAGCTACATTTCCCGCCAAGGGCACCACGCCCACCAAACCGAGAAAACCGCGCGCCAAAAAGAGCAGCAGCTTGGCCAAGGAGCCGGTGCCTGCGTCGAAGATAGAAGAAAGCCAGGTGCAGGAGAACATACTGAGCCTGCCCAGCATGGAACAGGAGAACATTCCGCTGAACATCAACTGTCAAGAGGAGCGCGTCGAGTGCACGGTCGTGCCCAACCTCGGACTCAACGTGAAACTGGAGCCAGTCGCCGACTGCATGGTCAAAACGGAAATCATCACCGCCGACCTGCTCGCCTGTGAAATGTGTAGTGAGGTGTTCTCCGACCGCACCGACCTCTTGAACCATATACGCATCCACATGATTCGCCAGTAG
Protein Sequence: MAEVTAGSSNISLEWVPVGTGGGGEPPPQDVTQREVICGDSDWIAMTEEAGGGGGVAKEEEAVVSVVEEVITDATQGVVQDFVEIQVTEEEVVADGMWDGVQSAVVVGETKDVKQEDDVEIPLPENQDLYSQMHPYPCDFCSRRFAKKSTLMNHMISHQSERPHGCNLCGARYRRKCDLVNHMKIHALAPIRSTVDDEDEEDIPRINQVSVEGIKGRRKRAQSLVPKKMNSTSFSEDDMGGGDKKGGGRSKKGGGLGGGKKMTDDMKLLSNLSVMRQSGKRHWPITDTSRPYVCQQCGVGFAREKALGSHARMHAGDSPFECHVCGEMFWDPNMMKEHTRVKHPHVEASLRPAASTSVMIGGPAAASSSASNSAEGNFYCDTCGQSFQRHDMLKRHRRTHVKTEVDSSDDVNQQQAVSGDESGGGGATNVCGECGEFFETGVEVRAHMQLCHPEASPPPNHSSFNASGDSHYGDQHRCMSCGHMCDSMDELGEHVREMHGDSNQETTCTQCGKVCKDRRSLLKHSWLHSENRSFPCQACNKRFHSRARLRRHMMSHRDKAVQCSDCGEEFPDGRALLSHRHSHATSNSHPVRSFPCHDCGKTFGSRSSQQIHVRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYVCPVCPKAFNQRVVLREHIRAHHSGTDMKVNSCYECKVCGYLFGSSSELCLHLVHHSDENTAKHRLPTVGPRKYKRRRKLAPHDTTNLMLNDHAGGGDPSEHDYFSDTSDSQIEKKKYARRKTKYGSMSPPPAPPHEEFDVMKACESALENINSMVNEVEQKKRMEKVAKKNKLKAANLKQARNEKRAKAAKLMNSTSYASKYVVSRPDEDKTSPNGDRARMKSVYLPSSSNEVEVETEIAVDTIVNGADSRNRPRTKNVTFRNTDTGLKIEPATFPAKGTTPTKPRKPRAKKSSSLAKEPVPASKIEESQVQENILSLPSMEQENIPLNINCQEERVECTVVPNLGLNVKLEPVADCMVKTEIITADLLACEMCSEVFSDRTDLLNHIRIHMIRQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01354005;
90% Identity: -
80% Identity: -