Basic Information

Insect: Sogatella furcifera
Gene Symbol: -
Assembly: GCA_014356515.1
Location: chr4:37659298-37675191[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0058 0.3 11.9 0.4 1 23 496 518 496 518 0.96

2 17 0.00046 0.024 15.3 1.5 1 21 537 557 537 558 0.95

3 17 0.085 4.4 8.2 4.1 2 23 566 587 566 587 0.95

4 17 0.00095 0.049 14.3 0.4 2 23 594 616 594 616 0.94

5 17 1.3e-05 0.00068 20.2 4.6 1 23 622 644 622 644 0.96

6 17 6.6e-07 3.4e-05 24.3 2.6 1 23 653 676 653 676 0.95

7 17 0.0024 0.12 13.0 1.0 1 23 686 708 686 709 0.95

8 17 5.1e-05 0.0026 18.3 1.2 1 23 730 752 730 752 0.96

9 17 0.0023 0.12 13.1 0.4 1 20 758 777 758 780 0.93

10 17 0.85 44 5.0 3.2 1 23 801 823 801 823 0.96

11 17 0.017 0.89 10.4 0.9 1 23 829 851 829 851 0.96

12 17 5.4e-06 0.00028 21.4 0.9 1 23 867 889 867 889 0.99

13 17 1.7e-06 8.7e-05 23.0 0.3 1 23 895 917 895 917 0.98

14 17 0.0066 0.34 11.7 0.7 1 23 923 945 923 945 0.98

15 17 0.0017 0.087 13.5 3.0 1 23 951 973 951 973 0.98

16 17 1.3e-05 0.00067 20.2 1.5 1 23 979 1001 979 1001 0.99

17 17 2.4e-05 0.0012 19.4 0.6 2 23 1008 1030 1008 1030 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0058	0.3	11.9	0.4	1	23	496	518	496	518	0.96
2	17	0.00046	0.024	15.3	1.5	1	21	537	557	537	558	0.95
3	17	0.085	4.4	8.2	4.1	2	23	566	587	566	587	0.95
4	17	0.00095	0.049	14.3	0.4	2	23	594	616	594	616	0.94
5	17	1.3e-05	0.00068	20.2	4.6	1	23	622	644	622	644	0.96
6	17	6.6e-07	3.4e-05	24.3	2.6	1	23	653	676	653	676	0.95
7	17	0.0024	0.12	13.0	1.0	1	23	686	708	686	709	0.95
8	17	5.1e-05	0.0026	18.3	1.2	1	23	730	752	730	752	0.96
9	17	0.0023	0.12	13.1	0.4	1	20	758	777	758	780	0.93
10	17	0.85	44	5.0	3.2	1	23	801	823	801	823	0.96
11	17	0.017	0.89	10.4	0.9	1	23	829	851	829	851	0.96
12	17	5.4e-06	0.00028	21.4	0.9	1	23	867	889	867	889	0.99
13	17	1.7e-06	8.7e-05	23.0	0.3	1	23	895	917	895	917	0.98
14	17	0.0066	0.34	11.7	0.7	1	23	923	945	923	945	0.98
15	17	0.0017	0.087	13.5	3.0	1	23	951	973	951	973	0.98
16	17	1.3e-05	0.00067	20.2	1.5	1	23	979	1001	979	1001	0.99
17	17	2.4e-05	0.0012	19.4	0.6	2	23	1008	1030	1008	1030	0.96

Sequence Information

Coding Sequence: ATGGTTCTCACTTCAGGCGAAGACGATAACATCAAGATAGTCCTGAAGAATATTGCCGGCGAGATGGTGACGATGGTCGTACAGAGCGATGAAACATTTCAAGAGCTTCAGGAACGAGTTATGCTTGAAACTGGCATCACTTTGGATATAAACGACTTCACAATACAGGGAAAAACAATTAGCAACGAAGCCATAGTGACGGATTATTTTACAAATGCTCAAAATGATCCAGTTGAAGAGAAGCCTGTGATTACAGAAGATACGAAATGTGCCGTACCTGGGTGTACAAATACAAAATTGAACTGTCCCGATAAAGCGTTTTTCCAATTCCCCTTGGAAGAAGTAAGATGTCACCAGTGGGCGTTGTACTGTCAAAAACTGAGCGAGCAGTCAGGAAAGCATCGAATCCAGTTGAACATGAGCTCGGCGATTTGCGCAGATCATTTCAGGAGAGACCAGTTCGTGAAGAACACAACGACTCTGCTGAAAAGAACTGCCGTTCCTTGCATTCGACCTGAACTGCCCGCCGGCTGTGATGCGAATACTCCAAGAAGGAAATCGATTGCACTATCGCTGTCTCCCAGTATCTCTTTGAAGAGTGATAAGATCTTCGAGGAACTGTTCTCAAGTAACATATCAACTCTAGCTCCTGGATCTAGCGTTCTTTGTCGTTTATGTGCCAACCCATCTCCAGATATGCTTTTCATTTTCGATGACATTGGCTATAAGCTTAATATTCTGGAGAAAATAAATAATTGCCTCACTGTTGTGGTTCGTAACACAGATCTTTTGCCAAAGCAGATTTGTCGTCTTTGTTATGAAAAATTGACCAGCTTCAATGATATGATTGACTCGTCTCTAAAAGCTGAATCCAAATTGAAACTTCTAGTGAAAGACAACCACTTTCGTCTTGATGAAGCACCAAATTCTAATGCTGGGAAGACAGGAGATGCAGGTGAAGGAGAAGAAGCAGCAGCAGCAGCAGCGAATAACACAGAAGAAAACAACGAGGATGAAAGGAACTTCGCAATAAGTCCAACGAAGAGTGAGAGCAACCAACACTACTGTTGTCCCCTGTGCAGTTGTGGAAAAATGATGTTGAAGAGTGGCATTTATAAGGCGCGCACGCCAGTCTGCACGAAACAGGAGGGAGATGAGGATTGTGAGGCGGATGCGGAAGGAGGGGAAGGTGAGCCAGAGGAAGGGGACGGGGGAGAAGATGAGGCCAGCGGTGAGCAGAAGACGGCCTTCTGGAACGGCCAGCCTCTACCCGAACTCGAGATGGAAAACCTCTATCCCGACTGCATTGTCGGCATGGAACTGGATGCTATACCGGAAGAGTCATGGGAGAGCGAAACATCGTTCAAACAAGAACAACCTGTCACCCACATTAAAACTGAAATCCACTGTCGTTTATGCAGAATGGAGTTCACCAACATTAATGCTGTGTTGGAGCATTCACACACGCATGCTGACGACGACTCCTATCCGTGTGGCTTCTGCGACAGCTATTTTCCAACTAGAAGCGAACTGGAACAGCACTTCCAAGAGCACAGAATTATGAAGAAGAAGATCGTCTCAGCTGATTTATACGAACGAGGCCAGATGTTCACTTGTGACGTTTGTGGTGCTTCTTTCAAAACCGAGTCAAAGTATCGCGCGCACTACTGCAGCTCAGCTGGCAACTCCAACAACCGCTGCTTCCAGTGCAACAAATCGTTTCGGTCCGCCGATCGCCTCAAGTTCCACAGGCGCTTCCACGAGGGCGCCGTGCCTGGATACTGTGAAATCTGTCAGAAAACATTCCCCGACGAGGTGAAACTGTACAAGCACACCATGTACTTGCACTCGCAAAACAAGGGACATTGCTGTGAAGAGTGCGGCAAAGTGTTCAGATCAGTCAGTTCACTGAGGTACCATCAGCGGTCACATCAGGGCGAAACTGTTATGAAGCCGTTCACATGTGAACAGTGTGGCAAGTGCTTCATCCGAAAAAGCATGCTACGTAATCACATGCTTGCTACGCACAAGAATCTCAGTCAAGAAGGCACCTGCTTCACTTGTAAAATCTGCTTCGAAGCTTTTCCAACAACCGACCATGCTGTAGCACACATGGACATACATCATACAGCCGAATGTCATGGTGAGAGTACCTACAGCTTTGAAATGCATACAGTATCACGTCTATACATTTGCGAGTATTGTGAACGCTGCTTCACAAATGCGGCCACTCTGAACACACACAGGGAAGGCCACCCAACCGACACACCCTACCAGTGCAAAATGTGCGACATGTCGTTTGCTGTCCACGACTCACTCATCGAACACAAGCCCATGCATTTCGATTACGTCGATAAGGCGGCTCAAGATTACAGCCAGGATTTCAACATACCCACTGTCTACATGTGCGAGTTTTGCGAGAGGTGCTTCTTGAATTTCACCAAATTATCTGAACATTTGACTGTGCATTATGGAGACAAGCCGTACCAATGTAGATTTTGTGATGAGAAGTTCAAGTCGTCCGAGGAGGCTGGGGAGCATCGGCTGAAGCACGACCAGTCAGCTGCACCTGTTGATGATTTCGATTACTACCGTCCGTACGAGTGTCACTATTGTAGGAAGTCGTTTGCCATCGAGGATGCTCTCATCAAGCATATTCGTATGCATACTGGGGAAAAGCCGTTCATTTGTGATGTTTGTGGCAAAGGGTTCTCGCAGAGCTCAGGGCTGTACACACACCAGAAGGTGCACTCTGATGAGCGTCCGTACAGCTGTTCACAATGCCCGCGCACCTTCAAGATCAAGGGCGACCGGGACGTGCACGTGCGCAAGCACTCGGGCGATAGGCCGTATACGTGCGACTTCTGCGGAAAGGCGTTTATGACGCAGCATGTGTACAGCCAACACAGGAAGATACACACGGGAGAGCGGCCGTACCGCTGCGACGTGTGCGGCATCACGTTTCGGCGTTCGCATGTGCTTACCGTGCACAAGCGAATACACACCGGCGAGAAGCCCAACGTTTGCGACATCTGCGGCAAGCGCTATCGACAAAAGGGTGACATGCTCAAGCATCGCCGTGTACAGCATGGGGTTGGCAACATTAAGGTGTCCAACGTAGTGTCCTATGCCACCAACTAG
Protein Sequence: MVLTSGEDDNIKIVLKNIAGEMVTMVVQSDETFQELQERVMLETGITLDINDFTIQGKTISNEAIVTDYFTNAQNDPVEEKPVITEDTKCAVPGCTNTKLNCPDKAFFQFPLEEVRCHQWALYCQKLSEQSGKHRIQLNMSSAICADHFRRDQFVKNTTTLLKRTAVPCIRPELPAGCDANTPRRKSIALSLSPSISLKSDKIFEELFSSNISTLAPGSSVLCRLCANPSPDMLFIFDDIGYKLNILEKINNCLTVVVRNTDLLPKQICRLCYEKLTSFNDMIDSSLKAESKLKLLVKDNHFRLDEAPNSNAGKTGDAGEGEEAAAAAANNTEENNEDERNFAISPTKSESNQHYCCPLCSCGKMMLKSGIYKARTPVCTKQEGDEDCEADAEGGEGEPEEGDGGEDEASGEQKTAFWNGQPLPELEMENLYPDCIVGMELDAIPEESWESETSFKQEQPVTHIKTEIHCRLCRMEFTNINAVLEHSHTHADDDSYPCGFCDSYFPTRSELEQHFQEHRIMKKKIVSADLYERGQMFTCDVCGASFKTESKYRAHYCSSAGNSNNRCFQCNKSFRSADRLKFHRRFHEGAVPGYCEICQKTFPDEVKLYKHTMYLHSQNKGHCCEECGKVFRSVSSLRYHQRSHQGETVMKPFTCEQCGKCFIRKSMLRNHMLATHKNLSQEGTCFTCKICFEAFPTTDHAVAHMDIHHTAECHGESTYSFEMHTVSRLYICEYCERCFTNAATLNTHREGHPTDTPYQCKMCDMSFAVHDSLIEHKPMHFDYVDKAAQDYSQDFNIPTVYMCEFCERCFLNFTKLSEHLTVHYGDKPYQCRFCDEKFKSSEEAGEHRLKHDQSAAPVDDFDYYRPYECHYCRKSFAIEDALIKHIRMHTGEKPFICDVCGKGFSQSSGLYTHQKVHSDERPYSCSQCPRTFKIKGDRDVHVRKHSGDRPYTCDFCGKAFMTQHVYSQHRKIHTGERPYRCDVCGITFRRSHVLTVHKRIHTGEKPNVCDICGKRYRQKGDMLKHRRVQHGVGNIKVSNVVSYATN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00857876;
90% Identity: iTF_00857876;
80% Identity: -