Basic Information

Insect: Sogatella furcifera
Gene Symbol: lrrfip2
Assembly: GCA_014356515.1
Location: chr14:1635018-1669215[-]

Transcription Factor Domain

TF Family: LRRFIP
Domain: LRRFIP domain
PFAM: PF09738
TF Group: Unclassified Structure
Description: LRRFIP1 is a transcriptional repressor which preferentially binds to the GC-rich consensus sequence (5'- AGCCCCCGGCG-3') and may regulate expression of TNF, EGFR and PDGFA [1]. LRRFIP2 may function as activator of the canonical Wnt signalling pathway, in association with DVL3, upstream of CTNNB1/beta-catenin [2].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.9 2.4e+03 -2.2 0.4 41 82 255 305 244 329 0.45

2 5 0.16 4.2e+02 0.2 0.1 168 209 336 377 311 390 0.80

3 5 8 2.1e+04 -8.5 7.4 62 81 479 498 443 566 0.61

4 5 1.1e-104 2.9e-101 338.9 30.9 1 300 672 999 672 999 0.92

5 5 0.078 2.1e+02 1.2 3.5 130 167 1028 1065 1010 1073 0.78

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.9	2.4e+03	-2.2	0.4	41	82	255	305	244	329	0.45
2	5	0.16	4.2e+02	0.2	0.1	168	209	336	377	311	390	0.80
3	5	8	2.1e+04	-8.5	7.4	62	81	479	498	443	566	0.61
4	5	1.1e-104	2.9e-101	338.9	30.9	1	300	672	999	672	999	0.92
5	5	0.078	2.1e+02	1.2	3.5	130	167	1028	1065	1010	1073	0.78

Sequence Information

Coding Sequence: ATGGAAAACATTAACAGTAGTGAAGTAGTGACTCATAACAACATTAAGCATTTTAATCAAAAACATTTTTCTGAAAATCAAGTCAATATAATCAATAGGAACTGTGATTTACAAAATGGCTACCATGACAATGAAGTCGATGGTAATGTGAATTTGTGTCGTATTGCAGTGAACAATGGTTTGGATTTAAAAAGTGCAAAACTTTCAAATAGCGGAGAACCAAAGTATGTGTCTATAATTGATGTTAACCCATCATCAGATTTTGTTACAGTGGGTGGTGGATGTTCAGGTAGTGTTTTCACAAATGGGAATTGTGACATTGGTTTTCAAGTGCAAGATTTGAGTTGCAGAATCACAGGAAACGAAGAATTGGTAATTATTCCTGGCACCAAAGGTTTTCAAGTGCAAGATTTGAATCATAGAATCACAGAAAACAGAGGATTGGTAAACAGTTTGGAAAGTGTACATGGTTTTGGTTTAAAAGATAGTGAAGGAATTTTGGATGCGCAACAGTTTTTATCTGCAGAAAATGGTAACCAAGTGTTGATGAACTCTAGTCAAAAGTTGGGAGACTCTGAAGAAATTCCAGGGACGCATCAGTTTTTGTTGGGAGAAAATGGTGTTAACTGTGGTCAAAACTTGCAGGAATCTGAAGACATTTCAGGATCAAAGAGTATCTTGGTAACAGAATCTGATGGTTTCAAGAGTATCCTGGGTTCAAAGTGTATGATAAAGACTGAAAGTGATAAAAACAGAAATTGCCAATCAGATCAACACAAATCAGTTCATCATCAGGAACTGCATCATTCCAATTCAGGAACATCTGATGAAGACAATGGTAATCATCTAACAATGTCTTCCAAGTTTTCTAATAATTTGAATAGTCTGGAGTCATCTTCAGGGTATGAAACTGATCCAAATGTGTCAATTGTTGAAGTTAATGCAAATGTTGATGAAATAATGAAGCCGGCACTAGATTATTACAAAGTTTGCAGAAATAGAAATGAAGCTGTTAATAGGGAAAAAGTTATTAATGATGAAGGATGGGTACTAACAGATGATGAGGGTGAGGTTGAAGAATCATCTCAAGAAAAATCTTTGAGAAGTGATGGTGATGTTTCAAAAACTAATGGAAGTTTGGTTGGTAACAAGAAGGATGTTCCCCAGGGATCTCAAAGCTATGACAATGATGATGATGATGATGATGAGGAAGGGGGAAGTTCAAAAGATTTGTTGATGAATGATGATGATATTGATGATGCAATAATGGAAAGTGATGATGAGGACAAGTCTGCAAGCAAAGATTGTTCTTCAAGGAATGGTGTTGCAAGGATTGATGAAGACATGTCAAAAAGTGAGGAAGGGTCAAAAGATGATGATGAAAAGTCCAGGATCAGTGTTGGCTCTTCAAGGAATGGTGATTGGAAATCAAGAGAACCATCTGCAGAAAAATCAAGAGGTAGTAGTCAGGAAAGTGGAAAAAGTATGGATATTGATGTCAATGATGAATCAAGCCTGAATGGTGGGATCCCAGTAAATGGTGGCAAACATTCTAATGCAAGTACTTCTGTGGTAAAGAATGCTGATGTAGCAAATTCTGCCACAAATGGTGCTAGTAACTCTGATGATGACAAAGATGAAGATGAATCTAGTCAGAGTTCTGCAAAAGGCACCAAACATTCTGCTGATGAGGCAAATTCAGTAAGAAATGTTGCAAGTAATGGTGTGGCAGATTGTGCCATAAATGGTGCACGTAATGCTGGTGCGGCAATTTCTGGCAGAAACATTCTGGGTCATCAAGGCAATGTAGTTGATGATGAGGATGATTCTTGTTCAACCTCTTTGGATGGTTATTCTTCCCAAGATGAAGATGATGTTGATGCCAAAGTGGATCAGCAACCTCAAAAGCCACAGTTGAAGAGGACGCGCAGTAATGCCGGAGCAACTGACTATTGGAATGAGGAGGGGGAGGATGGGTGTATTGTGGAGTTTCTGGACAAAAGTACTGATGGTGCGGAAGCTCGTTTGGCGGCAAAACGTCAGGCGAGAGCGGAAGCGCGCGAAATTCGAATGCGAGAACTCGAACGCCAGCAGCGGGAAGCAGAGGAAACAGCTGATAAGGTCTACGATATTTACAGCACGCCAGATGCCGTCCAACGTTCGTCGCGTGTGGCGGCCGCTATCGGCACGCCGCGCTCGGCGGTCGGTGTTGACCGACTCGGTATTGTGTCGACCAACCATAGGTCCGAATTGCGGGAGACCAACAATAGCTATCATTCGTCGAGGCGGAGTTCGGAGGACTCGCTGGAGGAGACGAGCAGTTTGAGGGATATGAGGCACGAGCTGAAAGAAGTGGAGGACAAATTCAGGAAGGCGATGATAGCCAATGCTCAGTTGGACAATGAGAAAGCGGCGGCCGCTTATCAGGTGGAACTGCTCAAGGATCGGCTGGAGGAGATGGACGAGAATCATTCACAGCTCAACAGGGAACACCGTGACAAATGTAGACAGTTTGAAGCTTTAAAGAGAGCGGCGGCCAAGTTACAGGAAGATCTCGAATGGACCAGGGTGCAACTCGAGGAACGAGATCGATTAATCGAAGAACAAGGTCTCGTAATAGTGGGCGGAGAGTATTCGTCGAGTGGCGAGGATGACGAGCAGAACGATTCGGGCAAAAAGCAGCAGAAAATGCCGAAACGCGCCCTGGTGTCGACACAAGTGGCTGAGGTGCTCGAGAAGGTCGGAAGCGGGTCGTTGGATGTTCGGCTGAAAAAGTTTGTCGAACAACGCAACGAGCTGCTCGACGAGTTGAACCGAGTCAAACTCGAGTTGGAGGAGGAGCGCACAAGGAACGGCGCTAACCGGCGGTTAACGGCTAACGGTCCGTTAACGGGCGACGGCGGGTTAACCGATTTGGACGAGGTGCAGCGCGAGGCGAACAAGTTGATCAGTGATTACAAGTTTCGATTGCAGAAGGCTGATCAGGATAATTCGACACTGCAGGCTACGGTGGCAAGATTGGAGAGTCAGGTGGTGCGATACAAAACAGCTGCAGAGGTGGCTGAAAAAGTTGAAGATGATTTGAAAGCTGAGCGGAGGAAACTACAACGAGAGTATCGAGAATCGCAGGCGAGAGTCGAAGAACTGGAGACGGCTCACTCGCATCTACAGAAACGCTTAGACAAATTGAAGAATGCCAAATCAGCACTTTTAAAAGAACTGTAG
Protein Sequence: MENINSSEVVTHNNIKHFNQKHFSENQVNIINRNCDLQNGYHDNEVDGNVNLCRIAVNNGLDLKSAKLSNSGEPKYVSIIDVNPSSDFVTVGGGCSGSVFTNGNCDIGFQVQDLSCRITGNEELVIIPGTKGFQVQDLNHRITENRGLVNSLESVHGFGLKDSEGILDAQQFLSAENGNQVLMNSSQKLGDSEEIPGTHQFLLGENGVNCGQNLQESEDISGSKSILVTESDGFKSILGSKCMIKTESDKNRNCQSDQHKSVHHQELHHSNSGTSDEDNGNHLTMSSKFSNNLNSLESSSGYETDPNVSIVEVNANVDEIMKPALDYYKVCRNRNEAVNREKVINDEGWVLTDDEGEVEESSQEKSLRSDGDVSKTNGSLVGNKKDVPQGSQSYDNDDDDDDEEGGSSKDLLMNDDDIDDAIMESDDEDKSASKDCSSRNGVARIDEDMSKSEEGSKDDDEKSRISVGSSRNGDWKSREPSAEKSRGSSQESGKSMDIDVNDESSLNGGIPVNGGKHSNASTSVVKNADVANSATNGASNSDDDKDEDESSQSSAKGTKHSADEANSVRNVASNGVADCAINGARNAGAAISGRNILGHQGNVVDDEDDSCSTSLDGYSSQDEDDVDAKVDQQPQKPQLKRTRSNAGATDYWNEEGEDGCIVEFLDKSTDGAEARLAAKRQARAEAREIRMRELERQQREAEETADKVYDIYSTPDAVQRSSRVAAAIGTPRSAVGVDRLGIVSTNHRSELRETNNSYHSSRRSSEDSLEETSSLRDMRHELKEVEDKFRKAMIANAQLDNEKAAAAYQVELLKDRLEEMDENHSQLNREHRDKCRQFEALKRAAAKLQEDLEWTRVQLEERDRLIEEQGLVIVGGEYSSSGEDDEQNDSGKKQQKMPKRALVSTQVAEVLEKVGSGSLDVRLKKFVEQRNELLDELNRVKLELEEERTRNGANRRLTANGPLTGDGGLTDLDEVQREANKLISDYKFRLQKADQDNSTLQATVARLESQVVRYKTAAEVAEKVEDDLKAERRKLQREYRESQARVEELETAHSHLQKRLDKLKNAKSALLKEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -