Sfur010487.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Sogatella furcifera
Gene Symbol
TFIP11
Assembly
GCA_014356515.1
Location
chr6:8111894-8127784[+]

Transcription Factor Domain

TF Family
GCFC
Domain
GCFC domain
PFAM
PF07842
TF Group
Unclassified Structure
Description
This entry describes a domain found in a number of GC-rich sequence DNA-binding factor proteins and homologues [4, 5], as well as in a number of other proteins including Tuftelin-interacting protein 11 [1]. While the function of the domain is unknown, some of the proteins it is found in are reported to be involved in pre-mRNA splicing [1, 2]. This domain is also found in Sip1, a septin interacting protein [3].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-91 4e-87 292.5 12.9 3 275 414 683 412 683 0.98
2 2 0.5 5.3e+03 -3.1 0.1 245 266 699 720 687 728 0.63

Sequence Information

Coding Sequence
ATGTCGGATGACGAAGTGGAAAGTTTTGAAATAACAGATTACGACTTGGAAAATGAATTCAACATAAACAGAAAACAGTTCAGACAGACGAAAAATCAATCCATTTACGGTATTTGGGCACAGCCTGAAGATGAGGATAGCGGAGACGAAGGTCCCAGTTCGAGGCCGTCGTTCAAGAAAGGAGGATCAAAGAAGTCCTACACTGCACCGATAGGCTTTGTGGCGGGCGGCATACAGCAGGCCGGGAAACCCAAAAAGGAGGTCGCCAAAAACGAAGAGGAAGATGAGGAGGAAGAAGAAGAGGATGAAAAAACAACGTCAAGGCGGTTCAATAAGAATCGCAATTCGTCCAGCGATGAAGACTCCAATCCATCGTTTATGAAAGGATCGGCGTTTCCTGGGTTGTTTGGGAGCAGCGGTGGTGAAATAGCTGGCCTGCGAAAGAAGTCGAGGCAGTTCGATGACACATTGGCCAAGAAAGGAGTCGGCAATTGGGAAAAGCACACTAAAGGCATTGGAGCCAAGCTGTTGTTACAGATGGGTTACCAACCGGGTAGAGGTCTGGGCAAAGACCTTCAAGGTATACAAGCGCCCATTGAAGCACACCTTCGCAAAGGAAGAGGAGCTATTGGAGCTTACGGACCAGAGAAAGCGAAAAAGAAGGAGCTTGAAGAGAAGGAAGCCAAACAACGGGAAGCGGGGAGTGGGAGCGGTAAGGTAGGGGGAGGAGAGGCGTCACTGTCACAGTGGCGCAAAGATGGCGGTGCGGCTACCAAGAAGAAAAGTGTGCAGTATGTCTATAAAAGTATTGAAGATGTACTGGAGGAGAGCAAGTACCCCAGCAAAGGAAAACGCGAATTCAGTGAACTGGCAAAAGTGAAAGTGATAGACATGACAGGTCCGGAGCAGCGTGTGTTATCCGGGTATCACGCCATTTCCGGCGTCAAAAAGCCCTCCGAGCAGTGGGAACTGAGACGAGAGAAAAAGTTCACTAATTTTGAAATGCCTGAGTTGCAACATAACCTCGATTTGCTTGTGGAGATGTGTGAAGAAGCAATTGTGCAGAACAACAAACAAACAACGTACACAGAAGACCGTAGTGTTACGTTGGAAAACGAGTTGAACAATTTGGAAAAAGTCGAAGCACAAGAAGCACAGTCTATTGCCACGTTGGAAAAAGTATTGGGCATTGTTGAGAACTTGATGGAGAAGAGCGAGAATCATACTCTGACATTGGACTTGGCTGCTGACGCTTTCCAAGATTTACAGACCAACTACCTCAGCGAGTACTGCACGTACGAAGTGCAGGCCCTAGCACTGGGCCTAGTGCAACCGCTTTTCAAGGAGCAGCTGAGTCACTGGCCGGTGCTGCAGCAGCCGCATGCGCCTATCGCCGCGTTCACACGTTGGAAGGCGCTGTTGCATGCCACCGATGCCAGCATGCAGTTTGGCGGAGTGGCAAGCACCGATCCGTATCAGCGGCTCGTCTGGGACGCGTGGATGCCGTGCATCCGGATTGCTGTCAGCACTTGGAACTGTCGTGAGTACGGCAAAATGCTTGAACTATTGGATGCATGGCGGGGTCTGATACCCGGCTGGACCATGGATAATATACTCAATGAACTGATAACACCCAAATTACAACGAGAAGTCGATGAATGGAACCCAGTCACCGATACTATTCCCATTCATACCTGGATACATCCTTGGTTACCGCTCATTGGGGTGAAAGTGCTTGAGACCTCAGTGTTCCCCACCATTCGTCACAAGCTGAGCGTGGCCCTGGTCAACTGGCATCCGTCAGATCCATCAGCACGGCTCATGCTGACACCGTGGCAGGGAGTTTTCAACAAAGGCCAGCTGGACGCCTTCCTAGTCAACAACATTGTGCCCAAGTTGCATGTGGCACTGCAACAATTGGTCATCAATCCACATCAACAGCATTTGGATAATTGGAAATGGGCAATGGATTGGAGTGAAATGATACCAGCCTACTCAATGGCCTCCATACTGGACAAGAGCTTTTTCCCAAAATGGATGCAAGTGCTCAGTTTATGGCTGAATGTGGCACAACCCAACTATGACCAGGTGAGCAACTGGTACCAGGGCTGGAAAGCGATGATCCCCCAGCGCCTACTGAAGGAGCCCACTGTGCAAGAACACCTCAACACGGCGCTCACCATGATGAGCAGATCGGCAATGGCGGTCACAGGGGGTGGGGCGGCCCCCTCCATGGTGGTTCCCACCGCCCCCACCACCACTCCTGCTGACAAGTATCAGGTATGTTTTCAGAGTGTCACATGA
Protein Sequence
MSDDEVESFEITDYDLENEFNINRKQFRQTKNQSIYGIWAQPEDEDSGDEGPSSRPSFKKGGSKKSYTAPIGFVAGGIQQAGKPKKEVAKNEEEDEEEEEEDEKTTSRRFNKNRNSSSDEDSNPSFMKGSAFPGLFGSSGGEIAGLRKKSRQFDDTLAKKGVGNWEKHTKGIGAKLLLQMGYQPGRGLGKDLQGIQAPIEAHLRKGRGAIGAYGPEKAKKKELEEKEAKQREAGSGSGKVGGGEASLSQWRKDGGAATKKKSVQYVYKSIEDVLEESKYPSKGKREFSELAKVKVIDMTGPEQRVLSGYHAISGVKKPSEQWELRREKKFTNFEMPELQHNLDLLVEMCEEAIVQNNKQTTYTEDRSVTLENELNNLEKVEAQEAQSIATLEKVLGIVENLMEKSENHTLTLDLAADAFQDLQTNYLSEYCTYEVQALALGLVQPLFKEQLSHWPVLQQPHAPIAAFTRWKALLHATDASMQFGGVASTDPYQRLVWDAWMPCIRIAVSTWNCREYGKMLELLDAWRGLIPGWTMDNILNELITPKLQREVDEWNPVTDTIPIHTWIHPWLPLIGVKVLETSVFPTIRHKLSVALVNWHPSDPSARLMLTPWQGVFNKGQLDAFLVNNIVPKLHVALQQLVINPHQQHLDNWKWAMDWSEMIPAYSMASILDKSFFPKWMQVLSLWLNVAQPNYDQVSNWYQGWKAMIPQRLLKEPTVQEHLNTALTMMSRSAMAVTGGGAAPSMVVPTAPTTTPADKYQVCFQSVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00857635;
90% Identity
-
80% Identity
-