Sate009296.1
Basic Information
- Insect
- Smittia aterrima
- Gene Symbol
- SMARCC2
- Assembly
- GCA_033063855.1
- Location
- CP093831.1:275822-279348[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2 3.5e+03 -1.8 0.1 34 43 200 209 198 211 0.86 2 2 5.6e-14 4.7e-11 42.6 0.1 3 44 624 665 622 667 0.95
Sequence Information
- Coding Sequence
- ATGAATCTTCAGCCGAAAAAGGATGGAAGTCCTAACGTGGAGTTCTTTCAATCACCCGAGTCAATACAAGGGTTTGAAAGTGTTCGATTATGGCTGCAAAAGAATCATAAGAAGTATGTTCAAACCGATCCACCAACGAAAGAATCACTTGCGCAACTTATTATCCAGCTCATCCAGTACCAGGATACAAAGTTGGCGAATTCTCAAGATCTCAACTTGACAACTCGGCTTCCGATGAGATTTTTCATGGATTTTAAGCCCGGAGGTGCTTTGTGCGTGATTCTTTATTCAATGTATCGTTTCAAAAGTGAACAGCGTtggagaaaatttgatttcactgCAAGCAAACCGGGTTCAAAGAAGGATCCAAACATTCAGATGTTCGGGGACATCGAACAACGTTTAATTGATGCTGAAATTTTTAAGCTTCCGGTTGTTTTCATTCGGCCAGAAGTAGAGCGGGGTATCGCCTCAAGACTTCGTGAGATCATTCAGAATCATCAAGCAGATTtaactgaagaagaagaagatgctACACACATCATATATCCTGAGGTTGATCCACTTCCAGAGGAGTATGCGCGACCAAGCTTCAAGAGAGATAAGAACGTGATGCTTCATTGGTATTACTTCCCAGAATCTTACGATTCATGGGTTCCAAACAATTTCGATATGCCCGAGAACGTTCCGGAGTGCCCATTGTCACCTTCAGACAAATGGCGAGTTGCAGCTAATTGGATTCGTGATTTGGATCAGTATAATGAATGGATGTCAGAGGAAGACTACGAGGTTGACGAACAGGGTCgcaagaaaaatcataaattacgtTTGTCTGTGGAAGATCTGATGTCAGCTGGCGACAGCGATAAAAGCAAGAGACAAAGTGCGGCTAAGGGGAAACGCAAGAGATCGCCTTCCCCAAAAGGAGCTAAACGAAAGTCGGGACGTTCGCCTGCAGtctttcaacaaaagaaaacaaggCCGGATGATGATGAGTCAGAGGATTTGACAAAAGATATGGATGATCCCCCGGCCGAACCAAACATCCAAGAAGTTAAACCATCTGTTAGTTCATCACTCTCAGGTCCAGCAACTCCAACAACAAAGCGCGATCCTGATATGGCTCCTCTAAAAGGAGGAGTTGTGCACGATCTTGACGAAGATATGGAACAGAACCCAGGAGAAGATTCTCAAACTGGAAAGGCTAGCGAGAACAGTAACACTCAAGATTTTGGAAATAAAGAAGATGTCGAGGACAACAACGTCACTGAACAAACTCATCACATCATCATTCCATCTTATTCTGCGTGGTTTGACTATAATTCTGTACATATTGTGGAGAAACGAGCATTGCCAGAATTTTTCAACGGAAAGAACAAATCGAAAACTCCAGAAATTTACTTGGCTTATCGTAACTTCATGATCGACACTTATAGATTGAATCCAACCGAGTATTTGACAAGTACTGCTTGTAGACGGAATTTGGCTGGAGATGTTTGTGCTATTATGCGAGCACATGCATTCCTTGAACAGTGGGGATTGATCAATTATCAAATCGATGCTGAGTCTCGTCCAACTCCGATGGGACCACCACCAACGTCTCATTTCCACATTCTTAGCGATACGCCATGTGGTTTGCAACCAATCAACCCACAGAAGATTCCTCAACCGTTGGCAGCTTCAAAAGCGCTGCTGGATCTTGACAAGAAAGCAAGTGCTGATAAAAAGGAAGATCCTAATTTACCGGCTCACTTGATTCCCAAACAAGAACCTGAAATCACTCCTGGAGCACAATTTGGTCTACGACTTGATCAATACGGGAAGAAACCAGCTGCACTACGCAACAAAACTGCAGCAAGCATGACTCGAGATTGGTCAGACCAGGAAACTCTTCTCTTGCTCGAAGGCTTAGAAATGTACAAGGACGATTGGAACAAAGTTTGCGAACATGTTGGCTCAAGAACGCAAGACGAATGCATTTTGCACTTCCTCCGATTACCAATCGAAGATCCATATTTGGAAGATGACAATACTTTCCTCGGACCTCTTAGCTATCAACCTATTCCATTTAGTAAAGCAGGAAACCCCATCATGTCAACTGTAGCCTTCTTAGCATCTGTAGTTGATCCGAGAATCGCAGCCAGTGCAGCAAAAGCGGCAATGGAAGAGTTTGCTGCAATTAAGGACGAAGTTCCAGCTGCGATGCTTGACTCTCATCTTAAGAACGTagaaaaaacaaactttggTGGAAAGTTCGATCCATTCGCTGGACTTACGACAAGTGGAATTGCTGGCACAGCTCctgagaaagagaaagatgaGACTGCTGAAGGCGACAAGGAAAAGGCTCAAGCAACCGAAGATGTTGAAATGAAGGATTCAACGAAGAAAGATTCTGaagaagaaacgcctcaaattgttgaaactgatgaaaataaaaaatctgatTCTGAAATGGTAGATAAGGAAACAGTCGAAAAGACAGATAGCAACGAGGCTGAAAAGAAAGCTGAAGAAAAGGCAAACGAAAGCTCTGGCGAAGAGAAGGAGGGTGGAGttgaatcaagaaaaatcttcaacgaAGGAAATCTCCAGTCAGCTGCGGGGGCAGCATTGGCAGCAGCAGCTGTAAAAGCTAAGCATTTGGCTGcagttgaagaaagaaagattaaaaGTCTCGTCGCGTTGCTTGTCGAAACTCAGatgaagaaacttgagaTTAAATTGAGACATTTCGAAGAACTAGAGACAACAATGGAGCGAGAGCGTGAAGGTTTGGAATATCAGCGTCAACAATTAATTCAGGAACGTCAGCAGTTCCACCTTGAGCAATTGAAAGCTGCTGAGTTCAGAGCTCGTCAACAAGCACATCAAAGATTCCAACAAGAGCATGGAGGACCATGGCAAAATCATCCAGCACCTCAACCGAACATGCCTGGAGTACAACCAAGCATGCCTCCATCACAAATCTCTCATGGCCCAATCATGCCGGGACAAAATCCTCCTCCAATGGCTATTCAACAGGCTACAGTTCCACATCCTGTTCCAAATGCAGCAATCGACCCTCAGGTGCCTGCACAGCAACATCATCAAATGACACCACAGCCAGCAGCAGTCGTCAATCCTCTGCCTCCGACAACTGTGCCCacttaa
- Protein Sequence
- MNLQPKKDGSPNVEFFQSPESIQGFESVRLWLQKNHKKYVQTDPPTKESLAQLIIQLIQYQDTKLANSQDLNLTTRLPMRFFMDFKPGGALCVILYSMYRFKSEQRWRKFDFTASKPGSKKDPNIQMFGDIEQRLIDAEIFKLPVVFIRPEVERGIASRLREIIQNHQADLTEEEEDATHIIYPEVDPLPEEYARPSFKRDKNVMLHWYYFPESYDSWVPNNFDMPENVPECPLSPSDKWRVAANWIRDLDQYNEWMSEEDYEVDEQGRKKNHKLRLSVEDLMSAGDSDKSKRQSAAKGKRKRSPSPKGAKRKSGRSPAVFQQKKTRPDDDESEDLTKDMDDPPAEPNIQEVKPSVSSSLSGPATPTTKRDPDMAPLKGGVVHDLDEDMEQNPGEDSQTGKASENSNTQDFGNKEDVEDNNVTEQTHHIIIPSYSAWFDYNSVHIVEKRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRAHAFLEQWGLINYQIDAESRPTPMGPPPTSHFHILSDTPCGLQPINPQKIPQPLAASKALLDLDKKASADKKEDPNLPAHLIPKQEPEITPGAQFGLRLDQYGKKPAALRNKTAASMTRDWSDQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDNTFLGPLSYQPIPFSKAGNPIMSTVAFLASVVDPRIAASAAKAAMEEFAAIKDEVPAAMLDSHLKNVEKTNFGGKFDPFAGLTTSGIAGTAPEKEKDETAEGDKEKAQATEDVEMKDSTKKDSEEETPQIVETDENKKSDSEMVDKETVEKTDSNEAEKKAEEKANESSGEEKEGGVESRKIFNEGNLQSAAGAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRFQQEHGGPWQNHPAPQPNMPGVQPSMPPSQISHGPIMPGQNPPPMAIQQATVPHPVPNAAIDPQVPAQQHHQMTPQPAAVVNPLPPTTVPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00346674;
- 90% Identity
- -
- 80% Identity
- -