Cmar001283.1
Basic Information
- Insect
- Clunio marinus
- Gene Symbol
- SMARCC2
- Assembly
- GCA_900005825.1
- Location
- CVRI01000047.1:4219701-4223451[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-14 1.8e-11 44.2 0.1 3 44 551 592 549 594 0.95
Sequence Information
- Coding Sequence
- ATGCGTTTTTTTAGAGATTTTAAAGCAGGTGGGGCATTGTGCGTAATATTTGCTACAATGTACCGCTTCAAAAGTGAACAACGTTGGAAGAAATTTGACTTCACTGTGAACAAGACAACATCAAAAAAAGATCCAAACATTCAAATGCTTCTCGAAATCGAATCTTGTCTAATGGATGCTGAAATTTTCCGACTTCCAGCAATTTTCATTCGACCGGAAGTTGAACGACCATTGGCATCAAAAATTCGGGATATTATTCATAATCATCAAGCAGATATAACTGAAGATGAGCAAGATGCAACGCATATTATCTATCCAGATGTGGATCCTTTGCCTGAGGAATATGCTCGTCCAACTTTTAAGCGTGACAAGAATGTGTTATTGCATTGGTATTACTTTCCTGAATCATACGATTCCTGGGTGCCGAACAACTTCGATCTCCCAGAAAATGTTCCCGAATACCCTCCACCTTCACCTGCTGAAGAGCGTTGGCGTGTTTCAGCGCAATGGATTCGAGATTTGGACACTTACAATGAATGGATGTCTGAGGAGGATTACGAAGTTGACGAGCAAGGTCGCAAGAAGATTCATAAATTACGCTTATCTGTTGAAGATCTGATGTCAGCTGGAGACAGCGataaaagtaagaaacaaATCGGTGGCAAAGGCAAAAAACGTGGACGTTCACCATCACCGAAAGGAGCGAAGAGAAAGTCTGGACGTTCTCCAGCTGTTTTCcaacaaaagaaaactcgtccagatgatgatgaatcgGAAGATTTAACTAAAGATATGGACGATCCACCAGCTGAACCAAACATTCAGGAAGTGAAGCCAAGTGCAAGTTCATCAGCTTCAGGTCCAGCAACACCAACAACGAAGCGTGATCCTGACATGGCACCATTGAAAGGCGGAATTGTTCAAGATCTCGACGAAGATATGGAACGAGGTGAAGATTCTCAAACAGGAAAGGCGAGCGAGAATAGTAACACACAAGATTTCGCCAATAAAGAAGACGTTGAAGACAACAATGTCACTGAACAAACGCATCACATCATCATTCCATCATATTCTGCTTGGTTTGATTACAACTCGGTGCATATTGTTGAGAAACGCGCACTTCCTGAATTCTTCAAcagtaaaaataaatcgaagACACCTGAAATTTATTTGGCTTATCGTAACTTCATGATTGACACTTATCGGTTGAATCCAACGGAATATTTAACAAGCACAGCATGCAGACGAAACTTAGCTGGTGATGTTTGTGCTATAATGAGAGTTCATGCATTTTTGGAGCAGTGGGGATTGATAAACTATCAGATTGATGCTGAATCACGACCAACACCGATGGGCCCACCACCGACATCGCATTTCCATATTCTCAGCGACACTCCTTGCGGTTTACAACCAATAAATCCTCAAAAAGTTCCACAACCTTTAGCAGCGTCAAAAGCACTTTTAGATTTGGACAAGAAAGCAAATAATCCTGACAAAAAAGATTCCAACGATCCAAACGCACCTCCAAATGTTGTCAAACAAGAACCAGGAAGTGAAATTTTACCAGGAGCTCAATTTGGCTTGAGACTTGATCAATATGCGAAGAAGCCAGCAGcattaagaaacaaaactGCTGCAAGTATGACACGAGAATGGACGGATCAGGAAACGTTGCTGCTTCTGGAAGGTCTTGAAATGTATAAAGATGATTGGAACAAAGTTTGTGAACATGTCGGGTCACGAACGCAAGACGAATGCATTTTACATTTCTTAAGATTACCGATTGAAGATCCATATTTGGAAGACGACAACACATTCTTAGGGCCGTTAAGTTACCAGCCGATTCCATTCAGTAAAGCTGGTAATCCAATAATGTCAACAGTTGCGTTCTTAGCTTCAGTTGTTGATCCGAGAATCGCTGCAAATGCAGCAAAAGCAGCTATGGAAGAATTTGCAGCAATCAAAGATGAAGTTCCAGCTGCGATGCTTGATCAACATTTAAAGAATGTTGAGAAGACGAATTTCGGTGGAAAGTTTGATCCTTTTGCTGGTTTGACGACGAGTGGAATTGCTGGCACAGctcttgaaaaagaaaaggacGAGACAAGTgaaaatgagaaggaaaagacGTCTGCAACGGAAGACGTTGAAATGAAAGATGCTACAAAGAAAGAACCCGAAGAAGAAACGCCACAAACTGaaactgatgaaaataaaaaatctgattCTGAAACAGCTGAAAAGGAGAATGCAGAGAAGGTAACAGAAGGAGGAAGTGTGACGGCAGCACCAGCGTCAGAAGGGAGTGAGAAGAAAGCGAATGAAGAGAAGACTAATGAGGGAGTTTGTGAAGAGAAAGAAGGCGGCGTTGAGTCGAGGAAAATCTTTAACGAAGGAAATTTGCAgtctgctgctgctgctgcatTAGCCGCTGCTGCTGTCAAAGCGAAACATCTTGCAGCTGTTGAAGAACGTAAGATAAAGAGTCTCGTTGCCCTTCTCGTGGAAACTCAAATGAAGAAGCTCGAGATAAAGTTGAGACATTTCGAAGAACTTGAAACGACGATGGAACGTGAGCGTGAAGGTTTAGAATATCAACGTCAGCAGTTAATTCAAGAACGTCAGCAATTTCATCTCGAACAGTTAAAAGCAGCAGAATTTAGAGCACGACAGCAAGCACATCAAAGATTCCAGCAAGAACATGGCGGCGGTCCCGGGCCATGGCAAAATCATCCAACACCTCAACCAAACATGGCGAATGTTCCTCCAAGTATTCCTCCTGGTCAAATTTCTCACGGTCCAATCATGCAAGGACAGAATCCGCCACCAGTTCAGCAAGCGCCAGTTCCTCATCCTGTCGCTAACGCTGCTGTTGatcatcaaatgGCACCACAACAACCATCAACGAATCCATTACCGCCAACAACTGTCCCAACTTAA
- Protein Sequence
- MRFFRDFKAGGALCVIFATMYRFKSEQRWKKFDFTVNKTTSKKDPNIQMLLEIESCLMDAEIFRLPAIFIRPEVERPLASKIRDIIHNHQADITEDEQDATHIIYPDVDPLPEEYARPTFKRDKNVLLHWYYFPESYDSWVPNNFDLPENVPEYPPPSPAEERWRVSAQWIRDLDTYNEWMSEEDYEVDEQGRKKIHKLRLSVEDLMSAGDSDKSKKQIGGKGKKRGRSPSPKGAKRKSGRSPAVFQQKKTRPDDDESEDLTKDMDDPPAEPNIQEVKPSASSSASGPATPTTKRDPDMAPLKGGIVQDLDEDMERGEDSQTGKASENSNTQDFANKEDVEDNNVTEQTHHIIIPSYSAWFDYNSVHIVEKRALPEFFNSKNKSKTPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAESRPTPMGPPPTSHFHILSDTPCGLQPINPQKVPQPLAASKALLDLDKKANNPDKKDSNDPNAPPNVVKQEPGSEILPGAQFGLRLDQYAKKPAALRNKTAASMTREWTDQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDNTFLGPLSYQPIPFSKAGNPIMSTVAFLASVVDPRIAANAAKAAMEEFAAIKDEVPAAMLDQHLKNVEKTNFGGKFDPFAGLTTSGIAGTALEKEKDETSENEKEKTSATEDVEMKDATKKEPEEETPQTETDENKKSDSETAEKENAEKVTEGGSVTAAPASEGSEKKANEEKTNEGVCEEKEGGVESRKIFNEGNLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRFQQEHGGGPGPWQNHPTPQPNMANVPPSIPPGQISHGPIMQGQNPPPVQQAPVPHPVANAAVDHQMAPQQPSTNPLPPTTVPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01352580;
- 90% Identity
- -
- 80% Identity
- -